Oncorhynchus tshawytscha (Chinook salmon): 112251459
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Entry
112251459 CDS
T05605
Symbol
sox14
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112251459 (sox14)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112251459 (sox14)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
PROL5-SMR
Motif
Other DBs
NCBI-GeneID:
112251459
NCBI-ProteinID:
XP_024278205
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All DBs
Position
LG05:complement(85216095..85217334)
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AA seq
235 aa
AA seq
DB search
MSKPVDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLSASDSLLSASEK
VRAFMPPTSVPYSFLDPSQFTSSAIQKMTEMPHTMTTSSLGYGSLGYQNGAFGSLGCPSQ
HTHTHPSPTNPGYVVPCNCTAWSASSLQPPVAYILFPGMTKSGIDPYSSTHATAM
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcctgtagatcatatcaagaggccaatgaatgcgttcatggtctggtcccgc
ggccagaggaggaaaatggcacaagagaatcccaaaatgcataactcagaaatcagcaaa
agacttggcgcggagtggaagctgctctctgaatccgaaaagcgtccttacatcgacgaa
gcgaagaggctgcgagcacagcacatgaaagaacacccagactataaatacagacccagg
cgcaaacccaagaatctactgaagaaggacaggtatgtgttccctttgccttaccttggg
gacacggatcacttgaaaggactctcagcctcggactctctgttgagcgcatcagagaaa
gtcagggcattcatgcccccgacctcggtaccgtactcgttcctcgacccgagccagttc
acctccagtgctatccagaaaatgacagagatgccccacaccatgaccaccagcagtttg
ggttacggctcgttgggataccagaacggcgcgttcggcagtttgggttgccccagccag
cacacccacacccacccgtcgcccacaaacccggggtacgtggttccctgtaactgtacc
gcctggtcggcgtcgagtttacagcccccggttgcctacatactttttccaggtatgacc
aagagtgggatagacccatattcatcaacacatgccactgctatgtaa
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