Oncorhynchus tshawytscha (Chinook salmon): 112251532
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Entry
112251532 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112251532
KO
K06260
platelet glycoprotein V
K28877
leucine-rich repeat-containing protein 15
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112251532
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112251532
04090 CD molecules [BR:
otw04090
]
112251532
Transporters [BR:
otw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
112251532
CD molecules [BR:
otw04090
]
Proteins
112251532
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_LRWD1
LRRNT
PRIMA1
Motif
Other DBs
NCBI-GeneID:
112251532
NCBI-ProteinID:
XP_024278284
LinkDB
All DBs
Position
LG05:complement(44929357..44953912)
Genome browser
AA seq
1302 aa
AA seq
DB search
MWSVLLFLLVQPLHTDSMVCPSSCMCNLEGAVKCVGNIRDVPKGMPTNMYLLQLNGTNMK
VLNEQSLAMLPLMLRLGISHSPLDTIHPEAFHVAPQLLSIKLSSNALSSLPSQVFSPLVS
LKQLHLDYNRLESIAPVLFEGLANLNELDVSNNAIAHLAPNVFHGLSSLRYLNLGRNSLQ
QLPPTLFHSLTQLQFLMLYNNKLERLEVGAFDELANLLELKLHNNQIAYISPEVFWALGN
LMTLTMSSNLLQGVPNESFYHLPKLTKLTIYKNPLLSLPDKLMGQMPRMKEFYLYDTNLS
TVPWNLFANMSGMERLSLHLNNKLRELPPDLFCCLPNLQKLSLKSNDIQDLHPDIFSKLA
NMDTLLLNDNKLRSLSEDIFKGNPSLASIELKNNQLRTLPGEVFSTAGGLRVVTLSGNPW
DCRCGIRDIASWIKLNEGVVSDRTDVICRNPYPLLLRPLGSLLNEEFKCDVTTPSSSRST
RSSIELSHAVSTTALEEQEVVDFTATTTAPEAPSTQQTENPTESVRFTTPGTRRTTAATP
TADVLDILDDDYIFKPMGTESLPVHVLSPPFHDRLVFENGLEFVHNNRLKGWVYLWTLQP
NGAYVGFLMALHILLVATGVALILAAMYGMYRLHQATEDLGAILTNRKHAIISERKQKDG
CLRRAVEDKLYCGAEQREDVWFWKKLESLINSHLTFLKREHSDKRGYKIADTPHQLISPF
TQLPSAVQGASMDLPINLLIFLLLLAISGVLGACPDGCQCKDNKILCHGRSITEFPSSVP
GSTTTFYISNTNITALKPDDLADFAEALGIFVVKDTGIREVFPGTFDLTHNLGALGFTGT
ELNDLPEALFLNLVKLESLTLSGNKFLVLRPAWLYSLAALRTLDFSKNLITSVPEKAFRS
VTQLEHLTLARNGINQLYRDTFRGLSKLKSLRLNRNALRAIPAGAFDDLVSLEELSLQDN
AITHLPANLFSQLQRLKKLYLSSNRLTSLPEGILLNLPNLAQISLYENELQSLSPGVFGP
MAVRELWLYDNRLTHLEEHTFSNLTQLRLLVLSRNQISSVSPGAFSGLAELGEVSLHTNL
LTSLQESTFQGLHKLVNISLEHNYIHSLPARLLQGHSHLGQLDLHNNSLLNLPSELLSTL
TVANEVLLAENPWKCDQDIVPLRDWLIRNPTKANLSTVVCLTPSVLSGDSIAELTDEELM
LSTPTAVPDITPTEKRRKPHTPAPKRSTPSPAAEATPTQEQGEDTSSGQGNGEGVSRNTQ
IIIIAVVCTAIITSIIVFCVCWRRNNRGSRNLGRRNKNNSVI
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgtattactctttctcctggtccagcctttgcacaccgacagcatggtctgc
cctagcagctgcatgtgcaacctagagggggccgtcaaatgtgtgggcaacatcagggac
gtgcccaaaggcatgcccaccaacatgtacctacttcagctgaatggcaccaacatgaag
gttctgaacgaacagagtctggccatgttgccccttatgctgcgtttaggcatcagccac
agccccctggacaccatccaccctgaggccttccatgtggccccgcagctcctctccatc
aagctgtcatccaacgccctctccagcctcccttcccaggtgttcagccccttggtcagc
ctgaagcagctgcatctggattacaatcgtctggagtccatcgctcccgtgttgttcgag
ggtctggccaatctgaatgaactggacgtcagtaacaacgccatcgctcacctcgccccc
aatgttttccacggactgagtagcctgcgctatctcaacctggggagaaactccctgcag
cagctgccccccaccttgttccactcattgacgcagttgcagttcctcatgctctacaac
aacaagctagagcggctggaggtgggtgccttcgacgagctggccaacctcctggagctc
aaactgcacaacaaccagatcgcatacatctcccccgaggtgttctgggccctaggcaac
ctcatgacactcaccatgtcctccaacctgctccagggcgtcccgaatgaaagcttctac
caccttcccaaactcaccaagctcactatctacaaaaaccctctgttgtcactgcctgat
aagttgatgggccaaatgcccaggatgaaggaattctacctgtatgacaccaacctcagc
accgtgccctggaacctgtttgccaacatgagtgggatggagaggctctccctgcacctc
aacaacaagctgagggagctgccccctgaccttttttgctgcctgcccaacctccagaag
ctttctctcaagtccaatgacatccaggatctacatccagatatcttctccaagctggcc
aatatggacactctgctcctgaatgataacaagcttcgctccctttctgaggacatattt
aagggcaaccccagtttggccagcatcgagctgaagaacaaccagctgcggacccttccg
ggggaggtcttctctactgcagggggtttaagggttgttactctgagtggcaacccatgg
gactgcaggtgtggcatcagagacattgcaagttggataaagcttaatgaaggcgtggtt
agtgatcggacggatgtgatatgtcgtaatccgtaccctctacttctccgcccacttggt
tccctactcaacgaagagtttaagtgtgacgttaccacaccctcgagcagccgctccacc
cgctcttcgattgaactcagccatgccgtttccactacagctcttgaggagcaagaggtg
gtagacttcacagccacaactactgcacccgaggctccatcaacccaacaaacagaaaat
cctactgagagtgtccggttcaccacacctgggactaggcgcacaacagctgccacaccg
accgccgacgttctcgacattcttgacgacgactatatattcaagcctatgggcaccgaa
tcgctccccgtccatgtcctatccccgcccttccacgacaggctggtgtttgagaacggg
ctcgagtttgtgcacaacaaccgcctaaagggctgggtttacctgtggacgctgcaaccc
aatggggcttacgttggtttcctcatggctctccacatccttctagtggccacaggcgtg
gccctgattctggctgccatgtacgggatgtaccgtctccaccaggccacggaagaccta
ggagcaatactcacaaacaggaaacacgccatcatatcagagaggaagcagaaagatggg
tgccttcgacgagctgtcgaagataaactgtactgtggagctgaacaacgtgaggatgtg
tggttctggaagaaactggaatctctaattaattcacatctgacatttctgaagagggag
cacagtgacaagagaggatacaagatagcagacactccccaccaactcatttctccgttc
actcaactgccaagcgctgtacaaggagcatcaatggacctgccaatcaacctcctcatc
tttctcctcctccttgccatcagtggagttcttggagcgtgcccagatggatgccagtgc
aaagacaacaaaatcctttgccatggcaggtcaatcacagagtttccctcctcagtgcct
ggttccactaccaccttctacatctccaacacaaacatcaccgctctcaaacctgatgac
ttggctgattttgccgaggcccttggcatctttgtggtcaaagacactgggatcagagaa
gtattccctggcacctttgacctcacccataacttgggtgccctgggcttcacaggcact
gagctgaatgacctgcctgaggccctgtttctaaatctggtgaagctggaatctctgact
ctgagcggcaacaagttcctggtgcttcgccccgcctggctctactccctcgctgctctg
aggaccctggacttcagcaagaacctcatcacgtctgtaccagagaaagcctttcgctct
gtcactcagctggagcatctcaccctggccaggaacggcatcaaccaactctatagggac
accttcaggggcctgagcaagctcaaatccctgcgtctgaaccggaacgctcttagggcg
atccctgctggagcgtttgatgacctggtaagcctggaggagctctctctgcaggataat
gccatcactcatctccccgctaacctgttctcccagctgcagaggctaaagaagctttat
ctctccagcaaccggctaacttccctcccagaggggattctcctcaacctccctaacctg
gcacagatctccctgtatgagaacgagctccagagtctgtccccaggagtgttcggcccc
atggccgtgagggagctgtggctgtatgacaaccggctaacccacctggaggaacacacc
ttcagcaacctgactcagctgcgtctgctggtactgagccggaaccagatcagctctgtg
tctcccggggccttcagtgggctggcagagctgggggaagtgtccctacacaccaacctc
ctcaccagcctgcaggaaagcaccttccaggggctgcataagctggtaaacatctccctg
gagcacaattacatccactcccttcctgccaggcttctccagggccactcccaccttggc
cagctggacctccacaacaactccctcctcaacctgccctcagagctcctcagcaccctc
acggtggccaatgaggtgctgctcgctgaaaatccctggaagtgtgaccaggacatcgtg
ccactgcgggactggctgatacggaaccccaccaaggctaacctcagtactgtggtgtgc
ctcacgccctctgtcttaagcggtgacagcatagccgaactgactgacgaggagttgatg
ttgtccactccgaccgccgtccctgatatcaccccgacagagaagaggaggaagccccac
acccccgctcccaagaggagcaccccctcccctgctgcagaggccacgcccacccaggag
cagggggaggacaccagcagtgggcaggggaacggagagggtgtgtccaggaacacacag
atcattatcatcgcggtggtctgcaccgccatcatcaccagtatcattgtcttctgcgtc
tgctggaggaggaacaacagaggcagccgcaaccttggccgcaggaacaaaaacaactcg
gtcatctag
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