Oncorhynchus tshawytscha (Chinook salmon): 112251533
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Entry
112251533 CDS
T05605
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251533 (ccdc50a)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112251533 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
112251533
NCBI-ProteinID:
XP_024278285
LinkDB
All DBs
Position
LG05:44971713..45005149
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AA seq
657 aa
AA seq
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MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGAIRAPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPEYVSFEPSRTRYPPYDSVEPSTSGRSRSPEHHLESRGGGSRVKHGDPYPEDHLSNNRG
KREGSYPDYHHPTEGRSKGKRDQRGRDPQGSQSTFYPDSREPRRHREERGDEGERVVRRK
ERPSRPPPQSHNPVERDEAWERKRECEKDRQREPRRDEERERDAPRHEERSRGGQRHGLR
SQDQEHGRDKHREKDRRRERTKSRERGLDEDYYEPIPSSRAWTVGGVEGPGDEGGPMARL
HSGPSELCEEEEEARRSPRPGVMRGERRGHRDPGEGPSIGTERSYTHPAPREPGRIVQGG
PGGRGAVVVGGEYGMGEATQGIAQLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQ
DEEIARLLMEQEKKEYKKSREKEKQGMRPEERGMRLEERRRPEGGDFKPNSEEVVRPRSR
EEEYQRHRNHQKPARPPQPLPHDYENVETSYSYSESHYSSRTPARPESAYKGTYYRQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttcccatcgatcaaaacaaactgcctggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaggccaaggccaagagacaacaccgggac
atagagcgcagcgacaatgagattgcccaggagatacaggaggaattggttcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccatccgagcccctctggacctggatgacaaacccaggcgacct
ggttcgaactcccactcccccgagtcgcatccccttaccccgggctcacgacgcgacctc
tcccccgagtacgtttcttttgagcctagcaggaccagataccccccatacgactctgtg
gagcctagcaccagtggacgttccaggtcccctgagcaccatttagagagtagaggaggc
ggtagtagggtcaagcatggagacccataccccgaggaccacctctccaataacaggggg
aaacgtgagggcagttacccagactaccaccaccccaccgagggtagaagtaaagggaag
agggaccagaggggccgagacccccaggggtcccagtccaccttctacccagacagccgt
gagcccaggagacacagagaggagagaggggatgagggagagcgggtggtgaggaggaag
gagaggcccagccggccgcccccgcagtcccacaaccctgtggagagagacgaggcttgg
gagagaaaaagagagtgtgagaaagaccggcaaagagaacccaggagagacgaggagagg
gagagagacgcaccaagacacgaggagagatcgcgaggcggacagagacatgggctgcga
tcgcaagaccaagagcatggccgagacaaacacagagaaaaagacagacgccgagagaga
accaagagcagggagcgaggtcttgatgaagactattacgagcccatacccagcagccgg
gcctggactgttggtggggtggagggccctggggatgaaggggggcccatggccaggctc
cactctggccccagtgagctgtgtgaggaggaggaggaggccagaaggagcccccgcccc
ggcgtgatgaggggggagaggagaggtcacagggaccctggggaggggcccagcataggc
acggagcgctcctacacgcaccccgctcccagggagccaggtcgtatcgtgcaaggggga
ccagggggtcgcggcgcagtggtggtaggaggggagtacgggatgggcgaggccacccag
ggcatcgcccagctggacctgagggagcaggagatcctggacatggaggtggcccggaaa
ctacaggaggaagaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcag
gatgaggagatagcccggctgctgatggagcaggagaagaaggagtacaagaagtccagg
gagaaggagaagcaggggatgaggccggaagagagggggatgaggctggaagagaggagg
cggccagagggaggagacttcaagcccaactcagaggaggtagtgcgtcccaggtcccga
gaggaggagtatcagaggcacaggaaccaccaaaagcctgccagacctcctcaacctctt
ccacatgactatgagaatgtggagaccagctacagctactcagagagccactactcttcc
cgcactccagccagacctgagtctgcttacaaaggtacctattacaggcagtga
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