Oncorhynchus tshawytscha (Chinook salmon): 112251536
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Entry
112251536 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112251536
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112251536
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112251536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
Pox_A_type_inc
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112251536
NCBI-ProteinID:
XP_042177898
UniProt:
A0AAZ3SCI1
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Position
LG05:complement(45413929..45458871)
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AA seq
573 aa
AA seq
DB search
MDLHRPSFKMDSSSYLPSPLASPALMVLASTAEAGHDSSIPCQAPRPFGVPISEKDLHLP
FPSGSYTFASMYHRQGPVSSHGNFPARDFPASLLHLHPQFHPPNLDCSSLEMLNHSGVGA
FRPFSSLPEEREVRGYQSAFTPAKRLKGCYTDSERKQYEFGGGRILSGSPWSLKAAEDSG
RKLFAVSGLLSDSEALSSPEDRKDGCKGNILYDSQAPVCPVCHAVLRPGELQEHMEQEMG
RLTQLQISINSVQRDNPLGASKSLSLSLHIKREGGSPASPPCPPEDPHSDRYQTFLRVRT
NRHTRLNVDYLRWCMCYAKPTPFHLHNETPLTPDSTQTVRIGKLKRRKADEVQDILVDLG
GEGEQWRERRRLQMTSMLGGFKGSVFVSSSTSNEGRGDSDADLDVDGDDTVDYGRAQYTE
ADIIPCSQREPREVEERKAPRGAVLNVGTLDHSKWTNEGCPSTSNGERNKLDNSITSVHR
TCKNCDIEMVSEDSALTTLDALKTRIRDLEKQMSRGDRYKCLICMDTYSTPLTSIQCWHV
HCEECWLRTLGAKKLCPQCNTITSPGDLRRVYL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgtccctcttttaagatggacagctcctcctacctgcccagtcccctg
gcctccccagccctgatggtgctggcctccacagctgaggctggccacgattcctccatc
ccctgccaggccccacggcctttcggtgtccccatctctgagaaggacctccacctcccc
ttcccctccggctcctacacatttgcctccatgtaccaccgccaggggcccgtctccagc
catggcaacttccccgccagagacttccctgcctccctgctccacctccacccccagttc
cacccccccaatctggactgctcatctctagagatgctcaaccacagcggggtgggcgcc
ttcagacccttctcctccctgcccgaggagagggaggtcaggggttatcagtcagccttc
acccctgctaagaggctcaagggctgctataccgattcggaaaggaagcagtatgagttt
ggaggagggcgtattctgtctggttcgccgtggtcgctcaaagccgctgaggattctggg
aggaagttgtttgcggtgtctggcctgctgtcagacagtgaggccttgtctagtcctgag
gaccgtaaggatggctgtaaggggaacatcctgtatgactcccaggccccagtgtgtcct
gtgtgccatgctgtgttacgaccaggtgagctacaggagcacatggagcaggagatgggc
agactgacacagttacaaatcagtattaattcagtgcagagggacaatccattaggggct
tcaaagtccctctcactatctctgcacattaaacgtgaggggggatctcccgcctctccc
ccctgcccacctgaagacccccactcagacagataccagacgtttcttcgtgtgaggacc
aacagacatacaagactgaatgtcgattacctccgctggtgcatgtgctacgccaaaccc
accccatttcatctccacaacgaaactcccctaaccccagacagcacacaaactgtcagg
atcggcaagctgaagaggaggaaagctgacgaagttcaggacattttggtcgacctggga
ggagagggggagcagtggagggagcggaggaggttacagatgacctccatgctggggggg
tttaaagggtcggtatttgtgagcagcagcacatctaatgagggccgtggtgacagtgat
gctgacctggacgttgatggagacgacaccgtggactacggaagagcacaatatacagag
gcagacatcatcccctgttcacaacgggagcccagggaggtggaggagaggaaagcaccg
aggggggctgttttaaatgttggaactctggaccattcaaaatggacaaatgagggatgt
ccatccaccagcaacggagagcgcaacaaactggacaacagcattacctccgtacacagg
acctgtaaaaactgtgacatagagatggtctctgaggattcggcactcacgacgctcgat
gcactaaaaacccggatacgagacctagagaagcagatgtccagaggagacagatacaaa
tgtctcatctgtatggacacatattctacacccctcacctccatccagtgctggcacgtc
cactgtgaggagtgctggctccgcacactgggggctaagaagctttgtccacagtgtaac
accataacttcacctggggacctgagacgggtgtatctgtag
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