Oncorhynchus tshawytscha (Chinook salmon): 112251541
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Entry
112251541 CDS
T05605
Name
(RefSeq) sphingosine 1-phosphate receptor 1
KO
K04288
sphingosine 1-phosphate receptor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04068
FoxO signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112251541
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112251541
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112251541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112251541
04090 CD molecules [BR:
otw04090
]
112251541
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Lipid
Sphingolipid
112251541
CD molecules [BR:
otw04090
]
Proteins
112251541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF3278
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112251541
NCBI-ProteinID:
XP_042177938
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All DBs
Position
LG05:complement(47811511..47815120)
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AA seq
372 aa
AA seq
DB search
MGDSMYSDLIARHYNFTGKLRKVEQDSRLKADSVVFIIVCCFIILENVLVLLTIWRTKKF
HKPMYYFIGNLALSDLLAGVVYTANILLSGANTYKLTPTQWFFREGSMFVALAASVFSLL
AIAIERHLTMLKMKLHNNGNTCRVFMLISTVWLIAAILGGLPIMGWNCIQSMPSCSTVLP
LYHKTYILFCTTVFSVILMAIVVLYARIYALVRTRSRKLVFRKVSNGRGGGSASSKSSEK
SMALLKTVIIVLSCFIACWAPLFILLLLDVACDIRMCAILYKAEWFLALAVLNSAMNPLI
YTLTSNEMRRAFLKTLMCCSVCTRPSGKFSRPIMGAEFSRSKSDNSSHPNKDEPEYSPRE
TVVSSGNITSSS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcgatgtattccgacttaatagccagacactacaacttcacagggaagctc
cggaaagtggagcaggattccagactcaaagcggactctgtggttttcatcattgtatgt
tgcttcattatccttgagaatgtcttggtcctgcttaccatttggaggaccaagaagttc
cacaagcccatgtactactttattgggaacttagccctatcagacttgctggctggtgtg
gtgtacactgccaacatcctgctgtcaggtgccaacacatacaaactgacccccacacag
tggttcttccgggaggggagtatgtttgtggccctggcagcctcagtcttcagcctgctg
gccatcgccatcgagcgccacctcaccatgctgaagatgaagttgcacaacaatggcaac
acgtgccgtgtcttcatgctcatcagcaccgtgtggctgattgcagccatcttgggcggc
ctgcccatcatgggctggaactgcatccagagcatgcccagctgctccaccgtactgccg
ctctaccacaagacctacatcctgttctgcaccaccgtcttcagtgtcatcctcatggcc
atcgtggtcctgtacgcgcgcatctacgccctggtgcgcacccgcagccgcaagctggtg
ttccgcaaggtctctaacggccgcggcgggggtagcgctagcagtaagagctcggagaag
tccatggccctgctgaagaccgtgatcatcgtgctgagctgtttcattgcctgctgggct
ccactcttcatcctcctgttgctggacgtggcctgcgacatccgcatgtgtgccatcctg
tacaaagccgagtggttcctggccctggccgtgctcaactcggcaatgaaccccctcatc
tacacgctcaccagcaacgagatgcgccgcgccttcctaaaaacgctcatgtgctgcagt
gtctgcacccggccctctggcaagttctctcggcccatcatgggtgcagagttcagccga
agcaagtcggacaactcgtcccaccccaataaggacgagccagagtactcgccgagggag
accgtcgtatcctctgggaatatcacctcctcttcttaa
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