Oncorhynchus tshawytscha (Chinook salmon): 112251550
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Entry
112251550 CDS
T05605
Name
(RefSeq) fibrillin-2 isoform X1
KO
K23342
fibrillin 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112251550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112251550
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112251550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
112251550
NCBI-ProteinID:
XP_042177996
UniProt:
A0A8C8I0F9
LinkDB
All DBs
Position
LG05:51708337..51805220
Genome browser
AA seq
2890 aa
AA seq
DB search
MGAGKLARLLLGWAAVCWAAVHTAYGQAGAGDGGYQASRFTGKVDEREVQRVRRRGQETL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGA
GAGAGMQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVY
GFTGPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHP
CRRGFIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDID
ECSTNPGICDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALASGRCAGDLQ
GQYTKMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIDGVPHGTGNGGFPHGVFPNGGG
SNGNGYSYGYKLNPNGPNGNGHHGNGGGIGGGGQGGGGGNGFGGNGGGRNIVSLNETVDV
CKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGSYH
CKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTGGSFQCICNAGFELTPDGKNCID
HDECATTNMCLNGMCINEDGSFKCICKSGFALAPNGRYCTDIDECQTPGICMNGRCINSE
GSFRCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEHGF
GEPCLPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICNI
GYESDSSGKNCVDINECLVNHLLCDNGLCRNTPGSYTCSCPKGFIFKPDSETCEDINECD
SSPCVNGICRNFAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGATLK
SECCSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECVVFPGVCTNGRCVNTQGS
FLCECAEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDC
EECPKAGTPENKAICPRGPGFANRGDILTGRPFYKDVNECKVFSGLCSHGTCRNTIGSFK
CRCSSGFALNMEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCM
DIDECERNTLLCQGGACLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSNNLCKNGHCV
NMVGNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPD
LRTCADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNICL
HGDCENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACVNIPGSFKCRCRD
GWVGDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECADNV
NLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVC
DDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTRVG
NCFLDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPSINSTEYKTLCPGGE
GFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECT
AHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMT
KKMCCCAYNVGKAWNKPCEACPTPVTSEYQVLCGNQAPGFIIDIHTGKPIDIDECREIPG
ICASGACINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINFPGSYRCE
CSPGFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDIDE
CDRQPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALVGQVCRNGQCINSLGSF
QCLCQDGYELTPDGKNCVDINECVSLPGTCSPGTCQNLDGSFRCICPTGYEVQNDQCIDI
NECEVEPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTRFESGKCSVPK
AFNTTKAKCCCSKMPGEGWGDPCELCPHDSEASFKSLCPYGHGSLPGLGETREDMNECLD
NPGVCVNGVCINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFEC
SCHEGFEPGSMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQDE
CSEGLDDCESKGMSCKNLIGTFMCICPPGMQHRPDGDGCMDLNECRAKPGVCKNGRCENT
VGSYRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLGRG
WGPQCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCHCN
VGYTTDFTSTSCIDMDECSASPKPCNFLCKNTEGSYLCSCPRGYTMQPDGKTCKDLDECS
TKQHNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPGSFNC
DCGKGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENE
CSGASVCGSASCYNTLGSFKCLCPSGFDFEQGGGGCQDVNECSMGSNPCSFGCSNTDGGY
LCGCPGGYYRAGQGHCITGQGFQDQYSSEGDDEDSLSPEACYECKINGDVGKKGRHRRHA
AGDNDLKEVSMASVDTQESIPMNLSLASLLNKEPLLELLPALEPLEHHVRYVITHGNQGE
HFRLLERRDGKSVLRLGRKSPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDYLLGEIGDA
LRIKLHIHLH
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccggttgctgctgggatgggcggccgtttgctgggccgcg
gtccacaccgcgtacggccaggcaggagcgggagatggagggtaccaagccagccgcttc
acggggaaggtggacgagagggaggtgcagagggttcgccggagaggccaggagacactg
agagggcccaatgtgtgtggctctcgcttccactcctattgttgccctggctggaagact
ctgcctggagggaaccagtgtattgtcccgatctgccgtaactcgtgcggtgatggcttc
tgttccagacccaacatgtgcacctgcggcagtggccagctctcccccagctgtggggcc
ggagccggagccggaatgcagagctgtaatgtcaggtgtatgaacggaggcagctgccaa
gaggactcctgctcctgtcagaaaggctacaccggcaaccactgtggacagcctgtgtgt
gagaatggttgccagaacggagggcgctgcattgggcccaacagatgtgcctgtgtctac
ggcttcactgggccgcagtgcgagagagactaccggactgggccctgtttcacgcaggtc
aacaaccagatgtgccagggccagttgagtggcatcgtgtgcaccaagacattgtgctgt
gccaccatcggacgggcatggggacacccctgtgagatgtgccccgcccagcctcacccc
tgtcgccgaggcttcatccccaacatccgcagcggcgcgtgccaggatgtggatgagtgt
caggccatcccggggctgtgtgcaggaggtaattgcatcaacacagtgggctcctatgag
tgtaaatgtcctgcgggccaccgccagagtgacaccagccacaagtgtgaagatattgac
gagtgcagcactaacccaggtatttgtgacggaggtgaatgcaccaacacagccggcagc
tacgtctgcacctgtccccgtggttacatcaccagcactgacggtgccagatgtgtagac
cagcgtgtgggcacgtgtttctcagcgttagcgagtgggcgctgtgcaggtgacctgcag
ggccagtataccaagatgcagtgctgctgtgacacgggccgctgctgggcttctggacag
atccctgagatgtgccctgtcagagggtccgatgagtacagaaggctgtgcatcgatggg
gttccccatggcacaggtaacggaggtttcccccacggagtcttccccaatggtggtggc
agcaacggtaacggttacagctacggctacaagctcaacccaaacggacctaatggcaat
ggtcaccatggcaacggaggaggaattggaggggggggacagggaggaggaggaggaaat
ggttttggaggaaacggtggggggcgtaatatcgtatcactcaatgagaccgttgatgtg
tgtaaacatttcaccaacctgtgtttgaacggacgctgtatccccaccccgaccagctac
cgctgtgaatgtaacatgggctacagacaggatgtacgcggggagtgtatcgatgtggat
gagtgcgtcagcaacccctgtgtcaatggagactgtgtcaacacacctgggtcgtaccac
tgcaagtgtcacgaaggctaccagggcacccccaccaaacaggcctgcattgatattgac
gagtgcatcgtgaacggagtgatgtgtcgtaacggacgttgtgtcaacactggcggaagc
ttccagtgcatctgcaacgctggctttgaactcactcctgatggaaagaactgcatagat
cacgatgagtgtgccaccaccaacatgtgtctcaatggaatgtgtatcaatgaggatggt
agcttcaagtgtatctgtaaatctggctttgccctggcacctaacggacgctactgcaca
gacattgatgagtgccagaccccaggcatctgtatgaacggacgctgtatcaactctgag
ggctccttccgctgtgagtgcccgccgggcctggccatcgacgtggacgggagagtgtgt
gtagacacacacatgcgcaccacctgctacggcgccatcaagatgggcacgtgctcgcgg
cccttcccgggcgccgtcaccaagtccgagtgctgctgtgccagtcctgaacacggcttc
ggagagccctgcctgccctgccctgcccgcaactcagctgagttccaggccgtgtgcagc
agtgggattggcatcaccgctgacggcagagacatcaacgagtgtgccttggaccctgac
atctgtcagaacggcatgtgtgagaacctgagagggagctaccgttgcatctgtaacatc
ggctacgagtccgactccagcggaaagaactgcgtggacatcaacgagtgtctcgtgaac
catctgctgtgtgacaacggcctgtgtagaaacacccccggcagctacacctgctcctgt
cccaaaggcttcatcttcaaaccagactctgagacctgcgaagatatcaacgagtgtgac
tccagcccgtgtgtcaacggaatctgccgcaacttcgccgggtccttcaactgcgagtgt
tctcacggcagcaagctggactccaccaacaccatctgcgtggacagcatgaaaggaacg
tgctggctgaatatccaagatggccgctgtgaggtcaacatcaacggcgccacactcaag
tctgagtgctgctctacgctgggagccgcctggggcagtccgtgtgaacgctgcgagatc
gacactgcctgttccagagggttcgctcgtatgaagggagtcaattgtgaagacatcaat
gagtgtgtggtgttcccgggggtgtgtaccaacgggcgttgtgtcaacacccagggctcc
ttcctctgtgagtgtgctgagggtctcaccctggacgggagtggacgcacctgcgtggac
gtgcgcagcgagcagtgctacatgaagtggcacgaggatgagtgtggcgagccgctgccc
gggcgctaccgcgtggacatgtgctgctgctcggtgggcgcggcctggggcatcgactgt
gaggagtgtcccaaggcgggaaccccggagaacaaggccatctgcccccgaggaccaggc
ttcgccaaccgaggagacatcctgactggcagacccttttacaaagatgtgaatgagtgt
aaggtgttcagcggcctgtgttctcacggaacgtgtcgcaacaccatcggcagcttcaag
tgtcgctgcagcagcggcttcgccctcaacatggaggagaggaactgcaccgatattgac
gaatgtcgtatctctccggacctgtgtggccacggcacctgtgtgaacacccccggcagc
ttcgagtgtgaatgcttcgagggctacgagagcggcttcatgatgatgaagaactgcatg
gatattgatgagtgtgagaggaacacactgctgtgtcaaggaggcgcctgtctgaacaca
gaggggagttacgagtgtgaatgtccccccggacaccagctgagccccgacggctcctcc
tgcgaagatgtgaacgagtgccagctgagcaacaacctgtgtaagaacggccactgtgtc
aacatggtggggaactaccagtgctcctgtgacacgggctaccaggttacaccagacaga
cagggctgtgtggatattgatgagtgtaccatcatgaacggaggctgtgacacacactgt
accaactcagagggcagctacgagtgcagctgtagtgagggctacgctctcatgcccgac
ctcagaacctgcgctgacatcgatgagtgcgaggacagccctgatatctgtgacgggggt
cagtgtaccaacgtccccggagagtaccgctgtctctgctacgacggattcatggcctcc
atggatatgaggacctgcattgatgtgaacgagtgtgagctgaaccctaacatctgtctg
catggggactgtgagaacaccaagggatccttcatctgtcactgtcagctgggatacttt
gtcaagaagggctccaccggctgcacagatattgatgagtgtgagattggagcccataac
tgtgacatgcatgctgcctgcgtcaacatccccggaagcttcaagtgtcgctgtcgtgac
ggctgggtgggggacggcatcaagtgtgtggacgtggatgagtgttccactgaggagcac
aactgcaacctcaacgcagactgtgtcaacaccccaggctcctaccgctgtgcctgcaag
gagggcttcaatggggatggcttttcctgttctgatatggatgagtgtgctgacaacgtg
aacctgtgtgagaacggccagtgtctgaacgctccgggtggctaccgctgcgagtgtgag
atgggcttcacccctactgaggacagcaaggcctgccaggacatcgacgagtgtaacttc
cagaacatctgtgtgtttggaacgtgtcagaacctcccggggatgttccggtgtgtgtgt
gacgacggctacgagctggaccgcagcggaggaaactgcactgacattaatgaatgtgcg
gaccctgtgaactgcatcaacggcttgtgtgtgaacacaccaggaagctacctgtgtaac
tgccctccggacttcgagctcaatccaactggagtgggctgtgtggacacacgagtgggc
aactgtttcctggacacgttggcgcgtggcgacggtggcatctcctgcagcgctgagatc
ggcgtgggcgtcacccgcgcctcctgctgctgctccctggggggagcctggggaaacccc
tgtgaactctgcccctccatcaactccacggagtacaagacactgtgtcccggaggagag
ggcttcagacctaaccccatcactgtcatcctggaagacattgatgagtgccaggagctg
ccaggcctgtgccagggtggcaactgtgtcaacaccttcggtagcttccagtgtgagtgc
cccgcaggctactacctcaacgaggagacacgcatctgcgaggatattgatgagtgcaca
gcccacattggaatctgtggccctggtacctgctacaacaccttggggaactacacctgc
gtgtgtcctcctgagtacatgcaggtcaacggaggaaacaactgcatggacatgaggaag
agcgtgtgttaccgcaacttcaacgacacgtgtgagaacgagctgtcgttcaacatgacc
aagaagatgtgctgctgtgcctacaacgtgggcaaagcctggaacaagccctgtgaagcc
tgccctacccctgtcacctcggagtaccaggtactgtgtgggaaccaggctcctgggttc
atcatagacatccacacaggcaagcccatcgatattgatgagtgtcgagagatcccgggg
atatgtgcaagcggagcgtgtatcaaccagataggaagcttccgctgtgaatgtcccatg
ggcttcagctacaacaatatactgctcatctgtgaagatattgacgagtgtaacagcgga
gacaacctgtgccaacgcaacgccaactgtatcaacttcccagggagctaccgctgcgag
tgctcaccaggcttcaagctgtccccaagtggggcctgcgtggaccgcaacgagtgccag
gagatccctaacgtgtgtagccacggagagtgtatcgacacccagggcagctaccgctgt
ctctgccacaacggcttcaaggccaccgccgaccagacaatgtgcatggatatcgacgag
tgtgacagacagccgtgtgggaacggaacctgtaagaacacagtgggctcctacaactgt
ctctgcttccctggattcgagctcacgcacaacaatgactgcatggacattgatgagtgc
agtgcgttggtgggtcaggtgtgtaggaacggccagtgtatcaacagcctgggatccttc
cagtgtctctgtcaggatggctacgaactcaccccagatggaaaaaactgtgtcgatatc
aatgagtgtgtgagtcttcctggtacctgctctcctggaacctgtcagaacctggacggg
tcgttccgctgtatctgcccaactggatacgaggtccagaacgaccagtgtatagatatc
aacgagtgtgaggtggagcccaatatctgccagtttggcacgtgcaccaacaccccagga
agtttccagtgtatctgccagaatggctttgtcctgtcggacaatgggcgccgctgtttt
gataccagagagagcttctgtttcacccgcttcgagtcaggcaagtgttctgtgcccaag
gccttcaacaccaccaaggccaagtgctgctgcagcaagatgccaggcgagggctgggga
gacccgtgcgagctgtgcccacacgatagcgaggcgtcctttaaaagcctgtgtccctac
ggccatggatccctgcctggacttggggaaacccgtgaggatatgaacgagtgtctggac
aacccaggcgtctgtgtgaacggtgtttgtatcaacacggacggatcgttccgctgcgag
tgtccctttggctacaacctggactataccggggtcaactgtgttgacactgatgagtgc
tctataggaaacccctgtggtaatgggacctgtactaatgtggtgggaggctttgagtgc
tcctgtcatgaaggcttcgaacctggctccatgatgacctgtgaagatatcaacgagtgc
tctctgaaccccctgctgtgtgccttccgctgtgtcaatacttttggttcctacgagtgc
atgtgtccctcgggctacgtgctgcgagacgaccaccgcatgtgcagagaccaggatgag
tgttcggaggggctggatgactgtgagtccaagggcatgtcctgtaagaacctgattggc
actttcatgtgtatctgcccccctggcatgcagcacagacctgacggagatggctgcatg
gacctgaatgagtgtcgcgcgaagcctggcgtctgtaagaacgggcgctgtgagaacaca
gtgggcagctaccgctgtgtgtgcaacgagggcttccagcccagctccaccggaacggac
tgtatcgataaccgacagggcttctgtttcaccgaggtgctccagactatgtgtcagcag
ggctccaccaacaggaacagtgtcaccaaatcggagtgctgctgcaacctcgggcgcggc
tggggaccccagtgtgagctctgcccactgcctggcactgtgcagtacaagaggatgtgc
ccactgggacccgggtacaccaccgacggcagagacatcaatgagtgcacggtgatgcca
gacctgtgtaagaacggccagtgcatcaacaccatcggatcgttccgctgccactgcaac
gtgggttataccaccgacttcaccagcacctcctgcattgatatggatgagtgttccgcg
tctcccaagccctgtaacttcctgtgtaagaacacagagggcagctacctgtgctcctgc
cccagaggatacactatgcagcctgacggaaagacctgcaaagatctggatgagtgttcc
accaagcagcacaactgtcagttcctgtgtgtgaacaccattggcggtttcacctgcaag
tgtcctgcaggcttcacccagcaccaaaccgcctgcatcgacaacaatgagtgtaatggg
cagaacagtgtgtgtggctccagggcttcctgtgtcaacactcccggcagcttcaactgt
gactgtgggaaaggcttctctctggacaccactggcctggagtgtgaagacgtggatgag
tgtggcagtaaccatcgctgtcagcacgggtgtcagaacatgatgggaggtttccgctgt
ggctgtcctcagggctatgtacaacactaccagtggaaccagtgtgtggatgagaatgag
tgttcgggtgcgtctgtgtgtggctcggcctcctgctacaacaccctgggcagctttaag
tgtttgtgtccgtccggctttgactttgaacagggagggggcggctgccaggatgtcaat
gagtgttccatgggcagtaacccctgcagcttcggctgctccaacacagacggaggatac
ctgtgtggctgtcctggaggttactacagggctggacagggtcattgtataacgggccag
ggcttccaggatcagtatagctcagagggagacgatgaggacagtctgtctccagaggcc
tgctacgaatgtaagatcaacggagacgtcggcaagaagggacgacacagacgtcacgct
gctggggacaacgacctcaaggaggtgagcatggccagcgtggacacccaggagtccatc
cccatgaacctgagcctggcctcgctgctcaacaaggagcccctgctggagctgctgccg
gccctggagcccctggagcaccatgtgcgctacgtcatcacccacggcaaccagggcgag
cactttcgcctgctggagcgccgcgacgggaagagcgtgctgaggttgggcaggaagtcg
cctccccctggctcctaccgcctggagatcgctagtctgcccctgttcgggccgcggcgc
ctccgacagctggaggaggaacacgacagcgactacctgctgggagagataggagacgcc
ctgcgcatcaagctgcacatccacctgcactga
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integrated database retrieval system
