Oncorhynchus tshawytscha (Chinook salmon): 112251563
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Entry
112251563 CDS
T05605
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If
KO
K10356
myosin I
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112251563 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112251563 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251563 (myo1f)
03036 Chromosome and associated proteins [BR:
otw03036
]
112251563 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112251563 (myo1f)
04147 Exosome [BR:
otw04147
]
112251563 (myo1f)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112251563 (myo1f)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Others
112251563 (myo1f)
Others
Actin-binding proteins
Myosins
112251563 (myo1f)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112251563 (myo1f)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112251563 (myo1f)
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112251563 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_9
SH3_2
nSTAND3
IQ
AAA_16
ABC_tran
AAA_22
Microtub_bd
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
112251563
NCBI-ProteinID:
XP_024278310
LinkDB
All DBs
Position
LG05:complement(57057036..57078283)
Genome browser
AA seq
1093 aa
AA seq
DB search
MGSKYHWQSQNVKQSGVDDMVLLSKISEDAIVENLKKRYMDDYIFTYIGSVLISVNPFKQ
MPYFTDREIELYQGAAQYENPPHIYALTDNMYRNMMIDQENQCVIISGESGAGKTVAAKY
IMGYISKVSGGGDKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEP
DGGKISNFLLEKSRVVSQNENERNFHVYYQLIEGANPQQKEALGIMTPDYYYYLNQSGTY
KVDGTNDSKDFQETMEAMNVIGIPEAYQAQGLQIITGILHLGNISFIEAGNYGQVESTDL
LAFPAYLLGVDPTRLQDKLTSRKMDSKWGGKSESIDVTLNQEQATYTRDALAKALYTRLF
DYLVEAINKAIQKPHEEYSIGVLDIYGFEIFQRNGFEQFCINFVNEKLQQIFIELTLKAE
QEEYVQEGIKWTPIEYFNNKVVCDLIENKLNPPGIMSVLDDVCATMHAKGEGADGTLLQK
LSAAVGTHEHFNSWNSGFVIHHYAGKVSYEINGFCERNRDVLFTDLIELMQSSEHDFIRS
LFPENLNTDKKSRPTTASSKIKKQANDLVNTLMKCTPHYIRCIKPNETKRPKDWEESRAK
HQVEYLGLRENIRVRRAGYAYRRVFNKFLQRYAILTAETWPCWRGGEQQGVLHLLRSVNM
DTDQYQMGRSKVFVKAPESLFLLEEMRERKFDMFARTIQKAWRRYIARRKYEQMREEASD
ILYNSKERRRNSINRNFVGDYLGLEQRPELRQFLAKRERVDFADSVNKFDRRFNSIKRDL
ILSPKGIYLIGREKVKKGPEKGQIKEVLKRKLEFESIHSVSLSMRQDDFFIVHEAQYDSL
LESNFKTEFLSLLCKRYEEVTKNKLSLSFNDRLEFRVKKEGWGGGGTRVVVFQRGQGDLA
EIKPAGKTLTINVGDGLPKTSKPTKKGSPQNHGGGRSQPPSRGHQNGAPGGKGPPPPQQP
EQTYSIPQKQNRPPSAALPKLGSLNTRRGSAQTQQGNLDFLNVPDQGVSGMQRKRSISSQ
RPPPAPSSRPKAQPRPTGPRCRALYQYAGQDTDELSFDTNDIIDLLNEDASGWWRGRFCG
KEGLFPGNYVEKI
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtaagtatcactggcagagtcagaatgtcaagcagagtggtgtggacgacatg
gtgctactgtccaagatcagcgaagacgccattgtggagaacctgaagaagagatacatg
gatgactacatcttcacctatattggctctgtgttgatatcagtgaaccctttcaaacag
atgccctacttcactgaccgggaaattgaactctaccaaggggctgcccagtatgaaaac
cctccccacatctacgccctgactgataacatgtacaggaacatgatgattgatcaggag
aaccagtgtgttattatcagtggggagagtggagctgggaagactgtggctgcaaaatac
attatgggttacatctccaaagtatcaggaggaggtgataaagtgcagcatgtgaaggac
atcatcctccagtccaatcctctattagaggccttcggcaatgccaagactgtccgcaac
aacaactccagtcgctttggtaagtactttgaaatccagtttagcagaggaggagagccg
gacggtggtaaaatctccaacttccttcttgagaagtcgagggtggtgagccagaatgag
aacgagaggaacttccacgtctactaccagctaatagaaggagccaacccccagcagaaa
gaagccctgggcatcatgactccagactactactactacctgaaccagtctgggacatac
aaagtggacggaaccaacgacagcaaggactttcaggagacaatggaagccatgaatgtg
attgggatcccagaggcctaccaggctcaggggctgcagatcataacaggaatcctgcac
cttggaaacatcagcttcatagaggcaggcaactatgggcaggtggaaagcactgacttg
cttgcctttcctgcctatctgctgggcgttgacccaacgcgtctgcaagacaaactgacc
agcagaaagatggactcaaagtggggtggaaagtctgagtccatcgatgtgacactcaat
caagaacaagccacatatacccgagacgccctggctaaggccctctacacacgactcttt
gactacctggtggaggcaataaacaaagccatacagaaacctcatgaagaatacagtata
ggagtacttgacatatatggctttgagatatttcagaggaatgggtttgagcagttctgc
atcaactttgtcaacgagaagctacagcagatatttattgagctgacactgaaggctgaa
caggaagagtatgttcaggaaggcatcaagtggacaccaattgagtatttcaacaacaag
gttgtgtgtgacctcatcgagaataagttgaacccaccaggcatcatgagtgtgctggat
gatgtgtgtgccaccatgcatgccaagggtgaaggggcagatggcaccctgctccagaag
ctctctgcggcggtgggcactcacgaacatttcaacagctggaactctggctttgtcatc
caccactatgcaggcaaggtctcctacgaaataaatggcttctgtgagagaaaccgggac
gtgctttttactgacctcattgaactcatgcagagcagtgaacatgacttcatccgcagc
ctcttccctgaaaacctcaacacagacaagaagagcaggcccactactgctagctctaag
atcaagaaacaagccaatgatctggtgaacacgttgatgaagtgcaccccccactatatc
cgatgtatcaaacccaacgagactaagagacccaaggactgggaggagagccgggccaag
caccaggtggagtaccttgggctgcgggagaacatccgtgtacgtcgagccggctacgcc
taccgcagagtcttcaataagttcctacagaggtatgccatcctgacggcagagacgtgg
ccgtgctggcgggggggagagcagcagggggtcctgcatctcctccgctctgtcaacatg
gacacagatcagtaccagatggggcgctccaaggtctttgtcaaggccccagagtcgctc
ttcctattggaagagatgcgggagaggaaattcgacatgttcgccaggaccatccagaag
gcctggagaaggtatatcgccaggaggaaatatgaacagatgagggaggaggcctcggac
atcctgtacaactctaaggagcggaggaggaacagcatcaacaggaactttgtaggagac
tatctgggcctggagcagaggcctgagctcagacagttcctggccaagagggagcgagtc
gactttgcagactctgtcaacaagtttgaccgcaggttcaattccatcaagagggacctg
attctgtctcccaagggcatctacctgataggcagagagaaggtgaagaaggggccagag
aagggacagataaaagaggtgttaaagaggaagctggagtttgagagcatccactctgtc
tctcttagtatgagacaggatgatttcttcatcgtgcatgaggctcagtatgacagtctg
ctagagtccaacttcaagactgagttcctcagcctgctctgtaagcgctatgaagaggtg
accaagaacaagctgtctctctccttcaacgacagactggagttccgggtgaagaaggag
ggctggggtggagggggcacccgtgttgtggtgttccagaggggacagggagacctggca
gagatcaaaccagctggaaagaccctcaccatcaacgtgggagacggcctgccaaagacc
tccaagcccaccaagaagggatctccacagaaccatggagggggcaggagtcagcctcct
agcagagggcaccagaatggtgcacccggaggtaaaggtcctccaccgccccagcagcca
gagcaaacctactccatcccccagaaacagaaccggccccccagcgccgccctccccaaa
ctgggctccctgaatacaagacgaggctcggctcagactcagcaggggaacctggacttc
ctcaacgtgcctgaccagggcgtgtctggaatgcagaggaagaggagtatcagcagccag
cggccacccccggccccatccagccggcccaaggcccagccacgccccaccggcccgcgt
tgccgggcgctgtaccagtatgctggccaggacacagacgagctcagcttcgacaccaat
gatatcatcgacctgctcaatgaagatgcatcaggctggtggagaggcaggttttgtggc
aaggaaggactcttccctggaaactatgtggagaagatctga
DBGET
integrated database retrieval system
