Oncorhynchus tshawytscha (Chinook salmon): 112251573
Help
Entry
112251573 CDS
T05605
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X2
KO
K15516
fragile X mental retardation protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112251573 (fxr1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112251573 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
112251573 (fxr1)
mRNA cycle factors
Stress granule specific factors
112251573 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXR_C1
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7617
Tudor_2
Motif
Other DBs
NCBI-GeneID:
112251573
NCBI-ProteinID:
XP_024278319
LinkDB
All DBs
Position
LG05:58293361..58327696
Genome browser
AA seq
675 aa
AA seq
DB search
MHCMPNMDELTVEVRGSNGAYYKGFVKDVHDDSLAIAFENNWQPERQVPFSDVRMPPPAD
GKKDIGEGEEVEIFSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRP
VNINKAVSKSSFFKCTVPVPDDLKAACESEQAHKDFKKAVGACRIVYCSETSSLVVLSIN
EATVKRVSLLSDMHLRSIRTKLMLMSRNEEATKHLESTKQLASGFQEEFTVRVDLMGLAI
GSHGSNIQQARKLPGVTAIELDEGSGTFRIYGENEEAVKKARNYLEFLEDSVQIPRNLVG
KVIGKNGKVIQEIVDKSGVVRVRIEGDKDGTQPRQEGMVPFTFVGTKENIGNVQVLLEYH
IAYLNEVEQLRMERLQIDEQLRQIGMGHRPSSGRPADKGYTTDDSVAATAVHTSRSYTGR
GRGRRGPNYTSGYGTNSEQSNASETDSERKDELSDWSLAGEEPERGTRQQRDSRRRAGPG
RGRGPRGRGAGRGAPNTALKDPYGNPYSVLDNTETDQTADTDASDSNLNTNRRRRSRRRR
TDEDTTVIDGMSESDNASLSENSLDDSKAKPQRRNRSSRRSVRPPEEKQPVTVADYISRA
ESQSRQTNQKELKKNKKELGQVECIAEHSLSAEANTSNGPSNGRGDEPGRASTEQVAKVT
YQGNGDQQPVLNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcatgcccaacatggatgaactgacggtggaggtccgtggctccaacggagca
tattataagggatttgtcaaagatgtccatgacgattcactcgctattgcctttgagaac
aattggcaaccagagagacaagttccctttagtgatgttcggatgccacctccagccgat
ggtaaaaaggacatcggggagggagaagaggtggagatcttctcccgggccaatgagcag
gagccatgtggctggtggcttgccaaagtgcgcatgatgaagggagatttctatgtgatc
gagtatgctgcctgtgacgccacatacaatgaaatagtcacatttgaacgtcttcggcct
gtaaatatcaacaaggcggtgtcaaagagctccttcttcaagtgcacagtcccagttccc
gacgacctgaaagcagcgtgcgaaagtgaacaagcgcataaagatttcaaaaaggcagtg
ggagcttgtcggattgtctactgttcagaaacaagtagcttggttgtactgtccataaat
gaagccacagttaagcgagtgtctttgctcagtgacatgcacctgaggagcattcgtact
aagctcatgctcatgtcccgaaatgaggaagccactaaacatctggagagtacaaagcaa
ctggcatctggtttccaagaggagtttacagtcagggtggacctcatgggccttgccatt
ggaagccatggaagcaacattcaacaagccagaaaactgcctggagtcactgctatcgag
ctggatgaggggagcgggacgttcagaatttacggagagaatgaggaggcagttaagaag
gcaaggaattatctggagtttcttgaagattctgttcagatccccaggaacttggtcggc
aaggtaattggcaagaatgggaaagtcattcaggagatcgttgacaagtctggagtggtg
agagttaggattgaaggggacaaggatggcacacagccacgtcaagaaggaatggtcccg
tttacatttgtcggcactaaggagaatattgggaatgtccaggtacttctggagtaccac
attgcctacctgaacgaagtcgagcagctgcgtatggagagactgcagatagacgagcag
ctgaggcagattgggatgggccacaggccttcatctggccgcccagcagacaagggctac
accacagacgacagtgtggctgctaccgccgtgcacaccagccgctcctacaccggcaga
ggccgcggacgcaggggccccaactacacctccggctatggcacaaactctgagcaatcc
aatgcctctgagactgactctgagcgtaaggatgagctgagtgactggtccctggcggga
gaagaaccggagagggggactcgacaacagagagacagcaggaggagagctggtccaggg
aggggtagagggcccaggggccgtggagcagggagaggagcccccaacaccgctctgaag
gatccttatggcaacccatacagtgtgcttgacaacacagagacagaccagacggctgac
actgatgcaagcgactccaacctcaacacaaaccgccgccgccgctcccgccgccgccgg
actgacgaggacacaacagtcattgatggcatgagtgaatcagataacgcttccctcagt
gagaatagccttgatgactcaaaagctaaaccacaacggcgtaaccgtagcagcagacgc
agtgtccgcccaccagaggaaaagcaaccagttacagtggcagattacatatcccgtgct
gaatcacaaagcagacagactaaccaaaaagaactgaaaaagaacaaaaaagaactgggg
caggttgagtgtatcgcggagcacagcctatctgcagaagcaaatacaagcaacggaccc
agcaatggaagaggtgacgaaccaggcagggcttccacagaacaggttgccaaagttact
taccaagggaatggtgaccagcagcctgtcctgaacggggtttcctaa
DBGET
integrated database retrieval system
