Oncorhynchus tshawytscha (Chinook salmon): 112251592
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Entry
112251592 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: palladin
KO
K22029
palladin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112251592
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112251592
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
112251592
NCBI-ProteinID:
XP_042178174
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All DBs
Position
LG05:complement(64412511..64482228)
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AA seq
1033 aa
AA seq
DB search
MPQVQKKTTSISLSIRSPSPKSPEAVPHRSTLVLSAPPHRMQSPVSSLYGGGGPLTAPPI
FTKLLQNAQASEGQVVVLECRVRGSFPLQVQWSRQGQVIQDSPDFRILQKKPRSAAEPEE
ICTLVIAEAFPEDGGQFCCTATNLYGSVSSTAQLSVTGGAFNTPTAVYDSVRNGVAPGDD
SVFEDTQAFPPPPPTEISLLEVPPKVPPSTCAEGFHVNELEIWPSMSGLQPVHMYHDVEG
QDRANWALQNGRPASPPQPTFSLLPREAQPDFPGPAKMSSPPVKEGPPLPTKPKLAEGIE
EETEHDRNAEQLKQLQDQIILEQQEAANWIQHQEQEQEVPPLPQQPPEVPSLPSPPLPPP
PSFQELESSAMQTSTFNYARPKQFIAAQSPGGTGPMGGYVTQSSGSSGSSLPSPLSPPTS
QKPFTRVVLPPFSKGGSIESQSPSSPSFPPPPPPFLSSSISSLSGTAKDFPPPPPPPPPP
VSSSPYSLAHSNSSSPFTSMPQSPAGFLASVLPATPTSPSFNALGLPKGNGTIAFPRKQS
RGTPRLASDSDIQGTKDAVIQDLERKLRFKEERMSNGQQRLTYEEKMARRLLGADNAATV
LNTQQQDEETVTQEYKVSSFEQRLISEIEFRLERSPVEESDDDVQHDEDATGTGVVPFFD
SKLKHYKVFEGMPVTFSCKVIGDPKPKIYWFKDGKQISKRSEHYRISRDADGTCNLHTAA
ASLDDDGNYTIMAGNPEGRVSCTGRMMVQAVNQRGRSQRSAPGHIRRPRSRSRDSGDENE
NIQERHFRPHFLQAPGDLIVQEGRLCRMDCKVSGLPTPDLLWQLNGQTIRPDSAHKMLVR
ENGVHSLVIEPVSSRDAGIYTCIASNRAGQNSFNLELIVAAKEMHKAPSFIEKLQNTGVA
EGYPVRLECRVSAVPYPQIFWKKENESFTHNTDRISMHQDNCGYLCMIIQPAMKEDAGWY
TVSAKNEAGIVSSTARLDVHTQWQQPNTPKPKKVRPSTSRYAALTERGLDVKAAFFPDSS
PLQPGGLVESDDL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtccagaagaagacgacttcaatctccctgtccattcgttcaccttcaccc
aagagccctgaggctgttcctcaccgctccaccctggtcctgtctgcacccccacaccgg
atgcagagtccagtttcttcactatatggaggtggtggtcctcttacagcgccccctatc
tttaccaagctcttacagaatgcccaggcatcagagggtcaggtggttgtgttggagtgc
agggttcgaggcagctttcctctgcaggtccagtggtccagacagggacaggtcatccag
gactctccagacttccgcatcctgcagaaaaagccacggtctgcagcagagccagaggag
atctgtacactggtgatagcagaggccttcccagaggatggaggtcagttctgctgcact
gcaaccaacctttacggctccgtcagcagcacagcccaactctctgtcactggaggggcc
ttcaacactcccacagcggtgtacgactcggtcaggaatggtgtggcgcccggggatgac
tctgtctttgaggacacccaggcctttccccctcccccacccacagagatcagcctattg
gaggttccgcccaaggtcccacccagtacctgcgccgagggtttccacgtcaacgagctg
gagatctggcccagcatgtcgggcctgcagcctgtccacatgtaccacgacgtggagggt
caggaccgggccaactgggcactgcagaacggcaggcctgccagcccccctcagcccacc
ttcagcctgcttccacgagaggcccagccagacttcccaggcccagccaagatgtcttcg
cccccagtgaaggaaggtcctccactgcccaccaagcccaaactagcggagggtatagag
gaggagacagaacatgacaggaacgcagaacagttgaagcagctgcaggatcagattata
ttggaacagcaggaagcagccaattggatccaacatcaggagcaagagcaggaagtcccg
cctctgccacagcagcccccggaagtgccctctctgccttctcctcctcttccccctcct
ccctccttccaggagctggagagcagcgccatgcagaccagcaccttcaactacgcccgg
ccaaagcagttcattgctgcccagagccctggggggactggccctatggggggctatgtc
acccagtcctcagggtcctctggttccagcctgccctcccccctctccccacccacctcc
caaaaacccttcaccagggttgtcctgcctcccttcagtaagggcggcagcattgagtct
cagtccccttcctctccctccttcccacctccacctcctcccttcctcagtagcagcatt
tcatccttgtcaggcactgccaaagacttccctccaccccctcctccccctcctccccct
gtctcttcgtccccctactccctcgcccactccaacagctcctcccccttcacctctatg
ccccaatcacctgctggcttcctggcctctgtccttccagccacacccactagcccatcc
ttcaacgccctgggcctgcctaaagggaacgggactattgcttttccccggaagcagtcc
agaggaaccccacgcctggcctcagactctgacatccagggaaccaaggatgctgtcatt
caggacctggagaggaaactacgattcaaggaggagcgcatgagcaatggacaacagagg
ttaacctatgaggagaagatggctcgcaggctgctgggggcagacaacgcagccacagta
ctaaacacacagcagcaggatgaggagacagttacacaggagtacaaggtgtccagcttc
gagcagcgcctgatcagtgagatcgagttccgtctggagcgctctccagtggaggagtct
gacgacgatgtgcagcatgacgaggatgccaccggcaccggggtggtgcccttcttcgac
agcaagctcaaacactacaaggtgttcgagggcatgcccgtcaccttctcctgcaaggtc
attggagaccccaagccaaagatctactggtttaaggatgggaagcagatctctaagagg
agtgaacactacaggatcagccgcgacgctgatgggacctgcaacctccacaccgccgcc
gcctcattggacgatgacggcaactacaccattatggctggtaaccctgaggggagggtg
agctgtactggaaggatgatggtccaggcagtgaaccagagggggaggagccagcgctct
gcacctggacacatccgcagacctaggtctcggtccagagacagtggtgatgagaacgag
aacatccaggagcgtcacttccgcccccacttcctgcaggcgcctggtgacctcatcgtc
caggagggtaggctctgccggatggactgcaaggtgagtggcttgcccacaccagacctg
ctctggcagctgaatggtcagaccattcgtcctgactccgcccacaagatgctggtgagg
gagaatggcgtccactcgctggtcatcgagcccgtgtccagccgggatgcaggcatctac
acctgcatcgccagcaaccgcgctggacagaactccttcaacctggaactcattgtagca
gccaaagagatgcacaaggccccttcgttcatcgagaagctgcagaacactggtgttgcc
gagggttacccggtgcgtctggagtgccgtgtgtcggctgttccctacccacagatcttt
tggaagaaagagaatgagtctttcacgcacaacacagacaggataagcatgcaccaggac
aactgtggctatctgtgtatgatcatccaaccagccatgaaggaggatgctggctggtac
accgtgtctgccaagaacgaggctggcattgtgtccagcactgcacgactcgacgtccac
actcagtggcagcagcccaacactcccaagcctaagaaggtgcgtccgtcgacgagtcgc
tatgcagcgctgacagagagaggactggacgtgaaggcagccttcttccctgactccagc
cccctgcagccgggaggcctggtggagagtgatgacctgtag
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