Oncorhynchus tshawytscha (Chinook salmon): 112251602
Help
Entry
112251602 CDS
T05605
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251602 (sec16b)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112251602 (sec16b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
112251602
NCBI-ProteinID:
XP_042178222
LinkDB
All DBs
Position
LG05:68517761..68544367
Genome browser
AA seq
1041 aa
AA seq
DB search
MDPRSPHWTEPGPGRHPQRPREREDYHRPAHPHQGTGPGHYPPPPDPREREDYHRPAHPH
QGTGPGHYPPPPDPREREDYHRPAQPHQGTGPGHYPPPPNVGDAITGHYPPPPDPWERER
QWSHQDPRYRVYLTSPPPSRPPLEFSLSSYSTPHSRTAYDRPHSTMSYIRPEPQHSRPHS
RQAYDYPPQIHWDHSQDYGYYDQGYYKGHYPDAGQWPPQEQWRSDQYQERRYEQDQTGSG
YPEQQRYDQRRASSQHDFRGSDEDRSKENGDAGRDDCSYAEGALAISKASGLSSSSYELS
QYINGAEQTDPAPQTTWSTADTEYAAIPQVTAPLKYTLPHALASFGPAGQLIRVSPGLAM
QGDPGKVELHSLEIILGETQEQQDMREFPGPLAREDLHKVDAISFAHQKAEACMKDEKLQ
DKGSAALLWNLLVLLCRQNGRIVGSDIAELLMRNSQGHGGSGGRESEAPTLIDLSEGPSP
ETDPLDGADLLTGTATSVGTAESTEKDMQGYTKLLLAGRKKEALESAMKSGLWGHALFLA
SKMDNRSYTTVLNRFTGQLAPNDPLQTLFQMLSGRIPAVSTCCGSDKWRDWEPHLAVMLS
NETGDPIGHQKSIITMGDTLASRGLLHAAHICYLTAYAPFGVYTAKTERLVLLGNCNSMP
FKEFAQNSAIRCTELFEYCQRLGDKFFCIPPFQVYKFLYACRLLDAGLASQAFHYCEVIG
MSLLRLQEPSMVLLGELIKLAERLKQCEGMGQLSDTADNRPGQEPDWLQQLRYRQQGIQM
GSSGCSDAYQSPADRSPLAHEESRVYSESDTSDLSARGDDQGLDAKFLSYKAAEEQQQQH
VQAQQINTQPLLPVMASNTQPAVPLVVGGQDHSYHYTDTAQPPPQHPTLDCPPSAEEGAD
PSAGPGMLGVQVNAGMMPLAEYGQQYGQHYGQENDYGDQQAWQQGGHQATITQEGKASEP
DKIQPKQSIKSGWFSGWFKHKPKEEQSKASQDADSADPVPTMETPPTSLFSFPPTTNIPA
ANFPTQPASTGINAFSRKVGE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagaagtccccactggaccgagccaggccctggtcgtcacccacagagaccc
agggagagagaggactaccataggcctgctcaccctcaccaggggactggacctgggcac
tacccaccaccaccggaccccagggagagagaggactaccataggcctgctcaccctcac
caggggactggacccgggcactacccaccaccaccggaccccagggagagagaggactac
cataggcctgctcaacctcaccaggggactggacccgggcactacccaccaccaccaaat
gttggggacgctatcactgggcactacccaccaccaccggacccctgggagagggagagg
cagtggtcccaccaggaccctcgctacagggtctacctcaccagccctcccccttccaga
ccacctctagagttctctctcagctcttacagcactccccactccagaacagcttacgac
agaccccattccacgatgagttacatcagaccagagccacaacactccagaccccactca
aggcaagcatatgactacccaccccagattcactgggaccatagtcaggactatggctac
tatgaccagggctattacaaaggacattacccagatgcaggtcaatggcctccccaggaa
cagtggagatctgaccagtatcaggagaggagatatgagcaggaccagactggcagtggc
tacccagaacaacaaaggtatgaccagcgaagagcgagctctcagcatgacttcagaggc
tctgatgaagatcgttctaaagagaatggggatgctggtagagatgactgctcttatgcc
gaaggggctctggccatctccaaggcctcaggcttgtcctccagtagctatgagttgagc
cagtacatcaacggtgctgaacagactgaccctgccccacaaaccacctggagcacagca
gacacagagtatgcagctattccccaggtgactgcccctctgaaatacactttgcctcat
gctctggccagctttggtccagccggacagttgatccgggtcagtcctggtctggccatg
cagggagacccagggaaagtggaactacacagtctcgagatcattctgggggaaacacag
gagcagcaggacatgagagaatttcctgggccactggctagggaagacctgcacaaagta
gatgccatctcttttgcccaccagaaggcagaagcctgcatgaaagatgaaaagctacaa
gacaagggctctgccgccctcctttggaatctactggtactgctgtgcagacagaatgga
cgtatcgttggttcagacatagcagagctgctgatgaggaactctcagggccatggtggt
tcagggggaagggaatcagaggcccctacactcatagacctgagtgagggccccagtcct
gagacagaccccttggatggagcagatctgttgacagggacagccactagtgttggtacg
gctgagtccacagagaaggacatgcagggatacaccaagcttctcctggctggacggaag
aaggaggccctcgagtcggccatgaagagtggactgtggggccacgccctgttcctggcc
agcaagatggacaacaggtcctataccactgtgttgaacaggtttacaggccagctagct
cccaacgaccccctacagaccctgtttcaaatgctctctggaaggatccctgctgtttcc
acgtgttgtggaagtgacaaatggagagactgggagcctcacctggccgtcatgctgtcc
aatgagacgggagatccaatcgggcaccagaagagcatcattaccatgggagacacgcta
gcctccagagggctgttacatgctgctcatatctgctatctgacagcttacgctcctttt
ggcgtctacacagccaagaccgaaagactggtgcttctgggcaactgcaacagtatgcca
ttcaaagagtttgctcagaattctgccattcggtgcacagagttattcgagtactgccag
agacttggagataaattcttctgtatcccccccttccaggtgtataagttcctgtatgcg
tgtcgtctgctggatgctgggctggcatcccaggccttccactactgtgaggtgataggg
atgtctttactcagactgcaggagcccagcatggtgctgctgggggagcttatcaagctg
gcagagcggctgaagcagtgtgagggaatgggacagctcagtgacacagctgacaacagg
cctggacaggagcctgactggctacagcagctgagatacagacagcagggcatacagatg
gggagcagtggttgtagtgatgcataccagtcaccagcagacaggagtccattggcccat
gaggagagcagagtgtattcagaatcagacaccagtgacctttctgcaaggggagatgac
cagggactggatgctaaattcctctcctacaaagcagcagaagagcaacaacaacagcac
gtgcaggcacagcagatcaacacccagcctctgctgccggtcatggcttctaacactcag
cctgcagtgccacttgtggtgggaggacaggaccacagttaccactacacagacactgcc
cagcctccgcctcagcatcctacactggactgtcctccttcagcagaggaaggggctgat
ccttctgctggcccaggcatgttaggggtccaagtgaatgctggcatgatgccgttggca
gagtatggtcagcagtatggtcagcactacggccaggagaatgattatggagatcagcag
gcatggcagcagggagggcaccaggccaccatcacgcaggagggcaaggcctcagagccg
gacaaaatccaaccaaaacagagcatcaagtcagggtggtttagcggctggttcaaacac
aaacccaaagaggagcaaagtaaggcgtctcaggatgcagactcagctgacccagttccc
actatggagacgccgcccacttccctattttctttccctcccactaccaacatccctgca
gccaattttcctacccagcctgcatctactggtatcaacgccttttctcggaaagtgggt
gaataa
DBGET
integrated database retrieval system
