Oncorhynchus tshawytscha (Chinook salmon): 112251637
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Entry
112251637 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: neuroblastoma-amplified sequence-like
KO
K20473
neuroblastoma-amplified sequence
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251637
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
112251637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbas_N
Sec39
Motif
Other DBs
NCBI-GeneID:
112251637
NCBI-ProteinID:
XP_042157058
LinkDB
All DBs
Position
LG18:44124427..44316247
Genome browser
AA seq
1909 aa
AA seq
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MADDSNVDVEDENILYDLLINTEWPPETDTQLRGNKEHSSSVIAKAVTGPFRFILHYLWY
SPSSSSLPPGLIRLANKQINWQLVLASHGKLLAVVQDQCVEIRSVRDDFGSVIGKCQVPK
DPSPQWRRVVWSHDCALLAYADSTGTVRVFDLMGSELFVIPPMASFPGDFSYAAAGLIFL
EYTASAQWSAELLVITYGGGLKSYLVSVGTNQSFQENHSFSFSTHYSHGITTAIYHPGHR
LLLVGGCESGVDDASRATRCGLTAWRALSGSPHYKQVTSYEDDTSTNQKKGFFTVPSFRL
FSRHNNEQDGVFRLSLSPDGTLLAVIHFSGRLSVWDLPSLRQTVSWDQQLQPGFEEINPE
WKTSLEKRKKIKDKEQYYSLCEVAWWSDCVLILARCSGSLTVSSVRTLQNLLGKSCEWFQ
PSPRVTAAHDGGFLSLECEVRLAQKRGRLDSNLGGVASEDEEGEEGDSDSDEESSAKARY
SGYVKQGLYYVTEMERFAPPRKRPRTVVKSYRLVSLRSTTPEELYQRKIDNEEYGEALSL
AQAYGLDSDLVYQRQWRKSTVSIASIQDYLSKIHKRSWVLHECVERVPENVDAAKELLQY
GLKGTDLEALIAIGNREDGGRFILSGDLDVDDAPYEDFLSAEKEMELKREKESRKRQELL
ARVDFSRLTLEQKELCRSRLKLLCYLDRLATYEDILGGPDAAEQRYDSEFFKKFRNQNII
LSARTYARESNVQALDILFTYHGAELLQHRLAILFNFPETTSPHEYTILLPEACVDERGD
LGVIPWDEQRHREMDWCEEDQCRTVLDQNLQDHAHFLYEDAPDWLRFRTATPPMDLLTDW
YLSRAQDIDSCSRQVDCALSLVRLGKERDIPGLERLCDDLVTMETLVYETACELSLTLRD
LQQLGDIDKLRLLMKNSSAERYVKDVFQWMVPFLHRCEKQSGGASEALLREYLVTLSRQD
LSLPLAVFQHSRPDSQQKVLGDPDQLMTVALECIYSCERDDQLSLCYDILECLPQRGYGP
ETNITASLHDQVDKLEKHLSVVEVLEKHGLQKPVSYVRSSQTSTEEAHALMVKLCRHTGR
RTPPVSESVWRGVLQDLLDMQHSVYTCLLPDTCHQIFVESLLCSSRPENVVLAGQLIHCS
AVSHDVVPVSGSFRDRGRGGLSAKVNYHTAVELVLAAAREYFNSSTTLTDPCIELARECL
KLITDCPPAVQEEMDIISSLSVLESFNVNILPLQVRLRVERLSIIEQCISQCSKAYTQSA
LLLDLASLLRVAGGDEWRCKGQVFSLLAQQALQALDYKTSYIHCQDLMASGYGDGWEVCS
LLGQCEGYMDLRARQELLAFSLTYCPPXSIHPLLAASSDLQTQVLYQAVNYQMDPPEPEC
FRDETDSVQSAGPPSSVSPLGGAAGDLLHRTTNRTIEVLASTGLTTKAVLTAVSDHKWWK
NQLNYLRPLHGRSGGSKAVGREENSGLERQGVNPFYQGLFDDPYVDQSEDVYGSYDAVPQ
EQFAEVLLRTGKLAETKTEGQTLFPATEVLLQLASDAFPRDMTLSLAYLLALPQVLDANR
CFETQSHSALSLQLAAYYYSLQIYNHLVPCLKANTHTLYRADPKELIRLVTQHVTAHSDW
PADVEELIGQLQVYNERLTDLTQAQVLQGLGRGVDTRRFSSDAHYKKQTILGLTETLDDS
VWRISLSLAQRYSIPLWDIYMTHLEFLFTDSGLSTKDIEGRVDTLALFDCLKSEPESFHS
HMSKYVLTSVEGTDLPRLLYYYTLLEECCGSYCSSVITPDTHIKLLKKLRSVTTGLDYRK
MTDEVSDPLAALEPVLTSQNVLSISKLANRLPRPGGGVVSASAVHATWLRKLFWRGDPQV
LKRPPQTEQDYLHAYDTCAKYLDRLLPADAVHFLDDITFSPLAVNQVRI
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatagcaacgttgacgtggaagatgagaacattttatatgatttactgata
aatacggaatggccacccgagaccgacactcagttgcgaggcaacaaggagcacagttca
tctgttattgccaaggctgtgacaggaccttttaggttcatcctgcattacctgtggtac
agtccctctagttcctctctacctcctggcctgatccgactggccaacaagcagatcaac
tggcaactggtgctagcaagtcatgggaagttgctggctgtggttcaggaccagtgtgtg
gagatcaggtctgtgagggatgactttggctctgtcattgggaagtgtcaggtgccgaag
gaccccagtccccagtggcggagggtggtgtggtcccatgactgtgccctgctggcgtac
gctgacagtaccggtaccgtgcgtgtcttcgacctcatgggcagcgaactgttcgtcatc
cccccgatggccagtttcccgggtgatttcagctacgctgcagcaggcctgatcttcctg
gagtacacggccagtgctcagtggtccgctgagctgctcgtcatcacatacgggggcggg
ctcaagagctacctcgtcagtgtcgggaccaatcagagcttccaagagaaccacagcttc
agtttctccacccactactctcacggcatcaccacggccatataccaccccgggcaccgg
ttgctgctggtggggggttgtgagtcgggtgttgacgatgcgtccagggcaacccggtgt
ggcctcacggcctggagagctctgtctgggtcgccccattacaaacaggtcaccagctac
gaggacgacaccagcactaaccagaagaaaggtttcttcactgtccccagcttcagactc
ttctcgagacacaacaatgaacaggacggtgtgtttcgtttgagtctgtctcctgacggg
acgctcctggccgtcatccatttctctggacgtctgtctgtatgggacctcccctctctc
agacagaccgtctcctgggatcaacaactacagccaggttttgaggagatcaacccagaa
tggaagacttctctggagaagaggaagaagattaaagacaaggagcagtactactctctg
tgtgaggtggcctggtggtcagactgcgtgctgatcttggcccggtgttctggttctctg
accgtgtcctctgttagaacccttcagaacctcttgggaaagagctgtgagtggttccag
ccatcgccacgggttaccgcagcccacgacgggggcttcctcagtctggagtgtgaagtg
cgtctggcacagaagagaggtcgtctggacagtaacttggggggtgtggcttcggaggat
gaggagggtgaggaaggagactctgactctgatgaagagtcgtcagccaaggcccgttac
tccggttacgtgaagcaggggctgtactacgtcaccgagatggaacgcttcgcgccgcca
cggaaacgtccccgcaccgtcgtcaagagttaccgtctggtcagcctacgctccaccacg
cctgaagagctgtaccaaaggaagatagataatgaggagtatggggaggccctttccctg
gcccaggcatacggcctagactcagacctggtctaccagagacagtggaggaagagcact
gtcagcatcgcctccatacaggactacctgagtaagatccataaaaggtcgtgggtgctc
catgagtgtgttgaacgtgtcccagagaacgtggacgctgccaaggagctgttgcagtac
ggcctgaaggggacagacctggaggcactcatcgctatcggcaaccgagaggacggtggc
aggttcatcctatcaggtgaccttgatgttgatgacgctccgtacgaagacttcctgtct
gcagaaaaagagatggagttaaagagagagaaggagagccggaagagacaggagctcctg
gccagggtcgacttcagcaggttgaccctggagcagaaggagttgtgtcgcagcagactg
aagctgctgtgttacctggaccgcctggccacctacgaggatatattaggtggtcccgat
gctgcagaacagagatatgactcggagttctttaaaaagttccggaaccagaatatcatt
ctgtcagccagaacctacgccagggagagtaatgtccaggcactggacatcctgttcacc
tatcatggagcagagcttctccaacaccgattggctatcctcttcaacttcccagaaacc
acctcgccacacgagtacaccatcctgctgccggaggcctgtgtggatgagagaggcgat
ttgggggtgatcccctgggatgaacagagacacagggagatggactggtgtgaggaggac
cagtgcaggacggtattggatcaaaacctccaggaccatgcccacttcctgtatgaggac
gctcctgattggctgcggttccgtacggccacgccccccatggacctgttgactgactgg
tacctgagccgtgcccaggacatcgactcctgttctagacaggtggactgtgcactgtca
ttggtgcgtctcgggaaggagcgggatatcccggggttggagcggctgtgtgatgacctg
gtaaccatggagacgttggtgtacgagacagcgtgcgagctcagcctgacactaagagac
ttgcagcagctcggcgacatcgacaagctccgcctcctcatgaagaactccagtgcagag
cgctatgttaaagatgtgttccagtggatggttcctttcctgcatcgctgtgaaaagcag
agcgggggcgctagtgaggccctgctgagagaatatctggtgaccctctctcggcaagac
ctgtctctacccctggctgtcttccaacactccagacctgacagccagcagaaggtgctt
ggggacccagatcagctgatgactgtggcgttggagtgtatctacagctgtgagagagac
gatcagctgtccctctgctacgacatcctggagtgtctccctcagagaggctacgggccg
gagacgaacatcaccgcatctctccacgatcaggtggacaaactggaaaaacacctcagt
gtggtagaggtgttggagaagcatggtcttcagaagcctgtttcctatgtgaggagcagc
cagaccagtacagaggaggctcatgctctcatggtcaaactctgcagacacaccgggcgc
aggaccccccctgtcagtgagtctgtgtggagaggtgttctacaggacctgctggacatg
cagcacagcgtgtacacctgtctcctacctgacacctgtcaccagatatttgtggagtca
ttgctgtgcagtagccgcccagagaacgtagtcctggctggtcagctgatacactgttca
gcggtcagccatgatgtggttccggtcagcgggtcattccgagaccggggtcgcggcggg
ttgagcgctaaggtcaactaccacacagccgtagagctggttctggctgctgccagggaa
tatttcaactcgtccaccaccctcaccgacccctgtatagaactggcacgggaatgtctg
aagctgatcacagactgtccacctgcagttcaggaggagatggatatcatcagctccctc
tctgtgctggagtccttcaatgtcaatatactaccactacaagtgcgtctgcgtgtggag
cggttgtctataattgagcagtgtatttcccagtgttctaaggcctacacacaatcagcc
ctgcttctggacctggcctcactgctccgagtcgcaggtggtgatgagtggaggtgtaag
ggtcaggtgttctctctactagctcaacaggctcttcaggcgctggactacaagacctcc
tacatacactgtcaggacctcatggcctcaggttatggtgatggctgggaagtgtgtagc
ctgcttggacagtgtgaggggtacatggacctcagggctcgccaggagctgttggccttc
tctttgacatactgccccccgnccagcatccaccccctcctggctgcctctagtgaccta
cagacacaggtgttgtaccaggcagtgaactatcagatggatccccctgaacctgaatgc
ttccgggacgagactgactcagtacagtccgctggtcctcccagctctgtttcaccattg
ggtggcgctgcaggagacctactccatcgtaccaccaatagaaccatagaggtcctggcc
agtactggcctgaccactaaggctgttctgactgccgtcagcgaccacaaatggtggaag
aaccagctcaactacctccgaccactgcatggtcggagtggaggctccaaggctgtagga
agagaggagaacagtggtctggagagacagggtgttaaccccttctaccagggactgttt
gatgatccatatgtagaccagagtgaagatgtgtatgggtcgtatgatgccgtacctcag
gagcagtttgctgaggttctactgcggactgggaagctggctgagaccaagacagaggga
cagaccctgttccctgccacagaggtactgctgcagctggccagtgatgcctttcccaga
gacatgaccctgtctctggcctatctcctggccctaccgcaggtcctggatgctaacagg
tgttttgagacgcagtcccactcggccctgtccctgcagctagcagcctactactatagt
ctacagatctacaaccacctggtcccatgcctcaaggccaacacacacactctctacagg
gccgaccccaaggagctgatccgattggtcacccagcacgtgacggcccattctgattgg
ccagcggacgtggaggagttgattggccagctccaggtgtataacgagcgtctgacagac
ctgacgcaggcccaggtgttgcaggggctgggacgtggggtcgacacaagacgattcagt
tccgacgcacactacaagaaacagaccattctgggtctgactgagaccctggatgacagc
gtgtggaggatcagtctgtctctagcccagcgctacagcattcccctctgggacatctat
atgactcacctggagttcctcttcactgacagcggtctctctaccaaggacattgagggt
cgtgtggacaccttggctctatttgactgtctgaagtcagaacctgagtctttccacagt
cacatgtctaaatatgtgttgacctccgtggaagggacagacctgcccaggctgttgtat
tactataccctgttggaggagtgttgtggatcgtactgctcttctgtcatcacccctgac
actcacatcaaactgctcaagaagctccgctccgtcactaccgggctggactaccgtaag
atgaccgatgaggtgtcggatcccctggccgctctggaacccgttctaaccagtcagaat
gtcctgtccatctccaaactggccaatcggctccctcgcccaggagggggtgtggtttct
gctagcgcagtgcacgcaacctggctaaggaagctgttctggaggggagacccacaggtt
ttaaagagacccccccagacagagcaggactaccttcacgcctatgacacctgtgcaaaa
tacttggacagactgcttcctgctgatgctgtccacttcctggatgacataacattctct
ccactagcagtcaatcaggtgaggatatga
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