Oncorhynchus tshawytscha (Chinook salmon): 112251790
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Entry
112251790 CDS
T05605
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112251790
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
112251790
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Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Det1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112251790
NCBI-ProteinID:
XP_024278496
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Position
LG05:50048071..50053546
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AA seq
662 aa
AA seq
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MLGNGLPSCCANECGVHCRSQQPYLNQQLQQHPQRQHCCDHLSILKCHQCSLYPSSSSPR
VKNSFPATSDKSSVHSSSSSQRWPGNHQLEGEGQRQGEQQVHPHTKKVGHVGSTPSLSKS
SSPPPDTVVTSAKYNGDVGRPLSSLGASPPNLSELDSARQEPLQTLHRSVLEEVFSKGLS
EDNSKGNSEGGGDAPQKRTKDIGYRLGQRRALFGKRKQLSDYALIFGMFGIVVMVTETEL
SWGVYTKESSYSFALKCLVSLSTAVLLGLIVMYHAREIQLFMVDNAADDWRIAMTYERIF
LVVLELLVCAIHPIPGQYIFTWTARLAFTYPHSLTNADVDLVLSIPMFLRLYLIGRVMLL
HSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSVSCWIIAAWTVRVCERY
HDTQEVTNNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVAR
KSELTRAEKHVHNFMMDTQLYKRVKNTAANVLRETWLIYKHTKLVKKIDHARVRKHQRKF
LQAIHQLRRVKLEQMKLTDQANTLVDLAKTQNMMYDLVSDLQLRSEELDRRIGSLDDKLD
SILVNLQALPSLLSQAVTQQHKDFLDGLALRVRKASSESELHWVPARCQRSLSTAPQTIP
YS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgctaggaaacggtttgcctagctgctgtgccaatgagtgtggagtgcattgtagaagc
caacaaccttacttaaaccagcaactacagcaacaccctcaaaggcagcattgttgtgac
catcttagcattctaaaatgccatcagtgttctctctacccatccagcagcagcccacga
gtgaagaattcattcccggctactagcgacaaaagcagtgttcactcctcttccagtagc
cagcggtggccggggaaccatcaactagagggagaagggcaacgacaaggggagcaacag
gtacatcctcataccaaaaaggttggccatgttggttcaacgccttccctgtccaagagc
agtagcccacctcccgacacagttgtgacaagcgctaaatacaatggggatgttgggaga
cccctgagcagcttaggagcttcgccacccaacctttcagagctggactcagcaagacaa
gagcccctccagactctccacaggtccgtcctggaggaggtgttctccaaaggcctcagt
gaggacaatagtaagggcaacagcgagggaggaggagacgcgccacagaagaggactaag
gacattggctacagattgggccagcgtagagcgctatttggaaagcgcaaacagctgagc
gactatgccttgattttcgggatgtttgggattgttgtcatggtgacggagacggaactg
tcctggggggtttacacgaaggaatcatcatactcatttgctctgaaatgcctcgtcagc
ctttcaactgctgtattgctcggcctcattgtgatgtaccatgcacgggaaatacagctc
ttcatggtggacaatgcagctgacgactggaggattgctatgacatatgagcggatcttc
ctggttgtgctggagctgctggtctgtgccatccaccccatcccgggccagtacatcttc
acctggacagcccgtctggccttcacctacccacactcattgaccaatgccgacgtggac
ctcgtcctctccatccccatgttcctcaggctctacctaatcggtcgtgtcatgctgctg
cacagcaagcttttcacggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaac
ttcaacacgcggttcgtcatgaagaccctcatgaccatctgccccggcacggtgctgctg
gtcttcagcgtctcttgttggatcatcgcggcgtggacggtgcgtgtatgtgagaggtat
catgacacacaggaagtgactaataacttccttggggccatgtggctcatctctatcacc
tttctctccattggttatggagacatggtccctcacacttactgtggaaagggtgtgtgt
ctgctgactggaatcatgggggctggctgcactgccctggtggttgctgtagttgccagg
aagtccgagttgaccagagctgagaagcatgttcacaactttatgatggacactcagctc
tataaacgagtgaaaaacacagctgccaatgtactcagagagacatggcttatctacaaa
cacaccaagttagtcaagaagatcgatcacgccagggtacgcaaacatcagcgcaaattt
ctgcaagccattcaccaactgcgcagagtcaaactggaacagatgaaactcaccgaccag
gctaacacacttgtggatctagccaagactcagaacatgatgtacgacctggtgtctgac
ctacagctgcgcagcgaggagctggataggaggattggtagtttggatgacaaactggac
tccatcctagtcaatctgcaggccctacccagcctgctctcccaagcggtcacacagcag
cacaaggacttcctggatggcttggccctccgtgtacggaaagcctcgtcggaatcggag
cttcactgggttcccgctaggtgccaacggtccctttccactgcaccacagaccatacct
tacagctga
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