Oncorhynchus tshawytscha (Chinook salmon): 112252021
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Entry
112252021 CDS
T05605
Symbol
uhrf1
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112252021 (uhrf1)
03036 Chromosome and associated proteins [BR:
otw03036
]
112252021 (uhrf1)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112252021 (uhrf1)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112252021 (uhrf1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112252021 (uhrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-RING_10
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Prok-RING_4
DUF3592
zf-RING_5
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
112252021
NCBI-ProteinID:
XP_024278669
LinkDB
All DBs
Position
LG06:complement(11027561..11040736)
Genome browser
AA seq
783 aa
AA seq
DB search
MWIQVRTMDGKETHRIDSLSKLTKVDELRLKILELFKVDPEKQRLFYRGKQMEDGHTIFD
YNVGLNDIVQLLVRQAAPPAAVLKSKDKEAELSDSDSGCSSAQSESDKSSTHGEAEVQAA
GTSTQTDLPDLVDPGFGCYKINEFVDARDLNMGAWFEAQIVNVTKTSGEEGSDTKPSEEE
VIHYHVKYEDYPENGVVLLHSKDVRPRARTVYQWHQLEVGMVVMVNFNPDEPKERGYWYD
AQIQRKRETRTLHEIYTKILLGDAGDSLNDCRIMFLTEIYKIEEPGALDESGVGSDSPLK
RSNGPECKHCKDDLKKNCRWCNCHVCGVKQDPDKQLLCDECDMAFHIYCLNPPLTSLPDD
DDWYCPECRNDVSEVVLAGEKLKDSKKKSKMASASSTSQRDWGKGMACVGRSKQCTIVPS
NHYGPVPGVPVGSIWKFRVQVSESGCHRPHVAGIHGRSNDGSYSLVLAGGYEDDQDNGNE
FTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALNCNASVNEKDGAEAKDWKAGKPVRV
VRSSKGRKHSKFSPEDGNRYDGIYKVVKYWPEKGKSGFLVWRYLLKRNDDEPAPWTRDGK
ERIKKLGLTMQYPEGYLEAQTAKEKEKENKKENEVTETPTKGKRKRKSQSNAEEKLSPTK
GTPKKMKVEAYKLTKEQKAWVKGDESNRKLWGEAMESLALGPKFLNKVEEVFSCICCQEV
VFQPITTECQHNVCRECLQRSFKAEVYSCPACRHDLGKNNPMTVNNPLQAILNQFFPGYS
SGR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaagtgcgcaccatggatggcaaggagacccatcggatcgactccctgtcc
aaacttaccaaggtggacgagctgcgcctcaagatcttggaactctttaaggttgaccca
gagaagcagaggcttttctaccggggaaagcagatggaggacggccacacaatctttgat
tacaacgtgggtttgaacgacatagtgcagctgcttgttagacaagccgcgccccctgct
gctgtcctcaaaagcaaggacaaagaggccgagctgtccgactctgactctggctgtagc
tctgcgcagagtgagtcagacaagagctccacccacggggaggctgaggtgcaggcagct
ggcacctccacccaaaccgacttgccagacctggtcgaccccggctttggctgttacaag
attaacgaatttgttgatgccagagacttgaacatgggtgcctggtttgaggcccaaatt
gtgaacgttacaaagacatctggagaggagggctctgacacgaaacccagcgaagaggaa
gttattcactaccatgtcaaatatgaagactacccagagaatggtgtggtgctgctgcat
tccaaggatgtgcgcccgcgtgctcgcactgtctaccagtggcaccagctagaggtgggc
atggtggtcatggtcaacttcaaccccgacgaacccaaggagcgtggctactggtacgat
gcccagatccagaggaagcgggagacacgcaccctgcacgagatctacaccaaaatactg
ctcggggatgctggtgactctctcaatgactgtaggatcatgttcttgactgaaatttac
aaaatcgaggagcctggagcattggatgaatctggagttggatctgacagtccattgaaa
aggtcaaacggacccgagtgcaaacactgcaaagatgacctcaaaaagaactgccgctgg
tgcaactgccacgtttgcggtgtgaagcaggaccctgacaagcagctgctgtgtgacgag
tgtgacatggccttccacatctactgccttaaccccccactgaccagcctccccgatgat
gatgactggtattgtcccgagtgccgcaacgatgtcagtgaagtggtcctagcaggagag
aaactcaaggacagcaagaagaaatccaagatggcgtccgctagctcaaccagccagcga
gactggggaaagggcatggcttgtgtcggccgcagcaagcagtgcaccatcgtgccctca
aaccactacggcccagtccctggcgtccccgttggaagtatttggaagttcagggtccag
gtgagtgagtctggttgccacaggccacatgtagctgggatccatgggaggagcaacgat
ggatcttactccctagtgctggcagggggttatgaagacgaccaggataatggcaacgag
ttcacctacaccggctcaggaggacgagacctgtctggcaacaagaggacagccgaacag
tcgtgtgatcagaagctcaccaatatgaacagagctctggctctgaactgcaacgcgtcg
gtgaacgagaaggacggggccgaggccaaagactggaaggcaggcaagccggtcagggtg
gtgcgcagctccaagggccgcaagcatagcaagttcagccctgaagacggcaacagatac
gacggcatctacaaggtggtgaaatactggccagagaaaggcaagtccggcttcctggtc
tggaggtacctgctcaaacgaaacgacgacgagccagcgccatggaccagggatggcaag
gaacgcatcaagaaactgggactcacaatgcagtatcctgagggctatctggaggcccag
actgccaaggagaaggagaaggaaaacaagaaggaaaatgaggtgactgaaacacccacc
aaaggaaagcggaagagaaagtctcagtctaatgctgaagagaagttgtcaccaaccaag
ggaactcccaagaagatgaaagttgaggcttataaactgaccaaagaacagaaggcttgg
gtcaagggtgacgagtccaacaggaagctgtggggtgaagccatggagtctctggccctt
ggcccgaaattcctgaacaaagttgaggaagtcttctcatgtatatgctgccaggaagtg
gtctttcaacctatcaccactgagtgccaacacaatgtctgcagggaatgccttcagcgg
tctttcaaggcagaggtgtactcatgcccggcatgtaggcacgatctggggaaaaacaac
ccaatgactgtcaacaatcccctccaagccattctcaaccagttcttcccaggatacagc
agtggacggtga
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integrated database retrieval system
