Oncorhynchus tshawytscha (Chinook salmon): 112252023
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Entry
112252023 CDS
T05605
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460
Fanconi anemia pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112252023
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112252023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112252023
03400 DNA repair and recombination proteins [BR:
otw03400
]
112252023
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112252023
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
112252023
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
112252023
NCBI-ProteinID:
XP_024278670
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Position
LG06:11275544..11277543
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AA seq
267 aa
AA seq
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MPADIMEKTSVSPVAATTASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNSDPTVLGKYRAGFSECTNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPTGPPHRAFGQSMVHIPNS
SPQGNVMPLPCKGGSPQSMSPETTKVYGGFHLVPATDGQFAFLIPNAAFTPNGPVIPVYA
NQVNTPVPAAVSPGAPTGNSDSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatataatggaaaagacatcagtctctcctgttgctgctactacagccagc
atgaacacgacacctgataaacccaagacggcttccgagcacaggaagtcatccaaacct
atcatggagaaaaggagaagagccagaatcaacgaaagcttgggacagttgaaaacactt
atcctggatgcgctcaaaaaagatagttccagacactcgaaacttgaaaaggcggacatc
ctggagatgaccgtaaaacatctccggaacctccagagagctcaaatgactgctgctttg
aactctgatcccaccgtgctagggaaatacagagctggattcagcgagtgtacaaatgaa
gtcacccggttcctgtccacctgcgaaggggttaacaccgaggtcaggacgcggcttctc
ggtcacttggccagctgcatgacgcagatcaacgctatgaactaccccacgcagcaccag
atccctaccgggcctccccaccgcgccttcggccagtccatggtacacatccccaactca
tctccacagggcaacgtgatgcccctgccttgtaaaggtggctctccccagagcatgtca
ccagaaacaacaaaagtatacggcggcttccacctggtacctgccacagatggacaattc
gccttccttatccccaatgcagcttttacgcccaacggtcccgttatccccgtgtacgcg
aaccaggtcaacacgcctgtcccagcagcggtgtcccccggtgcaccgacaggcaactcg
gactcagtgtggcgaccctggtag
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