Oncorhynchus tshawytscha (Chinook salmon): 112252025
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Entry
112252025 CDS
T05605
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112252025
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112252025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112252025
04147 Exosome [BR:
otw04147
]
112252025
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112252025
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112252025
Exosomal proteins of colorectal cancer cells
112252025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
Sugar_transport
TMEM_230_134
DUF202
Atthog
DUF1218
DUF6594
ActD
TMEM61
Motif
Other DBs
NCBI-GeneID:
112252025
NCBI-ProteinID:
XP_024278672
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All DBs
Position
LG06:11504886..11508406
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AA seq
217 aa
AA seq
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MTSSAVQLPGYALALIGLVGSVIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDATRH
TMCVNYKSLFHLPAEILITRVVMILSVLLSAIGVLVATLGMRCTRCLEEDENQKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIRSFVFSDSPTSLHNRFEFGNAVLVSWGAGICSVVGG
FLLGCRYLWSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctctgcggttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcagtgattgccaccactatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacgtacctggggttatggatgtcatgcaccgtcgacgccacaagacac
acgatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgatcacccga
gtggtgatgatcctcagtgtcctgttgtcagccattggcgtgctggtagccacgctgggg
atgagatgcactcgatgcctggaggaggatgaaaatcagaaggatagagtagccattgtt
ggaggattcctcttcatcattgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccggtcctttgtattctcagactcacctacttccttacataacaggttt
gagtttggcaacgctgtgctggtgagctggggtgcaggtatctgctctgtggtgggcgga
tttctcctgggctgcaggtatctgtggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaattcctggcaccaggcccggcacccactatgtttaa
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