Oncorhynchus tshawytscha (Chinook salmon): 112252066
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Entry
112252066 CDS
T05605
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252066
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112252066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PYRIN
SAM_2
SAM_PNT
Sep15_SelM
Motif
Other DBs
NCBI-GeneID:
112252066
NCBI-ProteinID:
XP_024278747
LinkDB
All DBs
Position
LG06:13874619..13900347
Genome browser
AA seq
1526 aa
AA seq
DB search
MSHSMESAIQIEKWTKEEVHQWLTTRVNIHHIYADKLLEEEVSGEDLEYFQKKDLLDLNI
KHGPAVKIVSMLENLKSGLQHKSQFPAYIKKWTQEQVCQWLREEAKVYHQYVDRILEEEV
SGNCLFCFKKNDLVELGIKHGPAVKIIGMLEKLNNGPEPILQPPTHINGDQDNLQKTPEK
QVELCQVLPVQTVSPMKSEPNIEELKIVKPSGKTVTQKKEEPKPQAMVAEKLPSKISSTP
SSLTLLQNTLDDLHQDEFKRFKSSLKDLKLNGYRLIARSHLEDSKTRTEVADSMTKHYEE
EALNVTLQILGRIEHNELAARLKRDMGSQMMTAQDPKKDLRRETNQGDKLKNVLTCGGNM
MDYYDQFVIVVNKCHSEQIEHLQFLSKLKLFCVLDFDPDSAAPGGVCSSYRESRVANLHL
PAQFQGEPNVVIKNLNLYKQTSWVFCNGRHDLDRESDRQLDYKDWFRGKRREIEHMVSFI
CKPEVLPNGRTLVIFLLLSPVTDRDPVFDTFLAFYSHAEESIVSICESRSTFEKWKDLIQ
EKCESDITRQSIFELTLGEVNGTIMSLGPHNQPSGRLLPSSDSSTVVLQQKDEDRMTALD
ILCQNECEKVYDENCTEFQDFKIKVEEEFYRGGKVNWWNFYFCEKPKAKPFIRRDKYDNL
KKMVKYQDPKTTCVLLNLFHHPGCGGTTLAMHVMWDLRRVFRCAVLKDNTLPKAEVAFQV
KNLMRLGSQKSTPVLLLVDDSKEAENTQALQNCIRQTFEEENTSRTVEDSSNSKVIIVSC
VRCHNPEDQFKQCSTNRLQITAKLTKKEQDNFEEKLVELKGSHEKPENFYSFMIMKSNFD
KKYIADVVSNTLKDLDMSTKKAQLLAFLALLNSYDAESDISMSLCEEFLGMKSLQMAYWG
QDHVLDRMEPYSNLLKQFNVEERGRYKAIRILHHDIASACLEELDRRYNIKRSEITLDML
HCDILFKPRVVKDTLMLTIQRVLVERQRKKVGATHFSPLIEKIHSQAGGQNIRDIFVKAS
SRFVTRASIPQALARYLYLYEQDFPQALIWAVKAMGVKENSYTADTVGQVYKSNLKHNIQ
SEKLKTPLKPEDFETNLKIAQKASNAFQMAQKLAMKNETEEQTDENLTKTPYNTSGYVGE
METTLTVFEMISNLPFFEGTDKVKRMNMQSFLKGTLSIKHVPKEDNEINSKYVDIIKEHT
QFLLALKPQVKEVFEFFNGYFTYIKGNNTGELESLNQKKISDHFTRYITLVCSSPAEIFK
ERADNPELRLSMDIEEHRMFLEEKNADTFAGILAKLHQKIDKTAEEVEKITECYTFLRHN
SVQNRKVETNFILVNIILHTLKPRSKHVKRHNELSDILMKTLQDIGLQHPYPEPYYLALL
LLWPDSNAEDTNIRAYVNSLGKSSHRQMSYLLRKSSTIAHFYLGPKEGLQRLVTKPKLDE
CFSRLPRADLAQLWRSGNIFKEREIVDRLYRVNGTVEQSELYANYGNLKIPVRPAYLGGI
RSGFSTEKVSFFLGFAIDGPLAYDIK
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgagccattcaatggagtctgcaattcagattgaaaagtggacgaaggaagaagttcat
cagtggttgacgacgcgggttaacattcaccatatctatgcagacaagttgctagaagag
gaggtatcaggggaagacctagaatacttccaaaagaaggatcttctggatctgaacata
aaacatggtccggctgtgaaaattgtgtcaatgcttgagaatttgaagagtggattacag
cataaatcacaatttcctgcatacatcaagaaatggacacaagaacaagtttgtcagtgg
ttaagggaagaggcgaaggtataccaccaatatgtagaccgtattttggaagaggaagtg
tcaggcaattgcctgttttgcttcaaaaagaatgatcttgtggaactaggcattaaacat
ggtcctgctgttaaaataattggcatgctagaaaagttaaacaatggaccagagcctata
ttacaaccccccacacacatcaacggtgaccaagacaatctacagaaaacacctgagaag
caagtagaactatgtcaagttctaccagttcagactgtatcccccatgaagagcgaacca
aacatagaagagctcaaaatagtgaaaccatcagggaaaacagttacacaaaagaaggaa
gaaccaaaaccacaggccatggttgcagaaaagttaccgtccaagatctcaagcacgcca
agttcacttaccttgctccagaatacccttgacgacttacatcaggacgagtttaaacgc
tttaagtcttctctgaaagacctaaaactgaacggatatagactgattgcacggagtcac
ttggaagacagcaagacccgcacagaagtagcggactcgatgacaaagcactatgaggaa
gaggcattaaatgtcactcttcagattctagggagaatcgaacacaatgaactggctgcc
cgtctgaaaagggatatgggttcacaaatgatgaccgcacaggaccccaaaaaggatttg
aggagagagaccaatcagggtgataaattgaaaaacgtattaacttgtggaggaaatatg
atggactactatgatcaattcgttattgttgtgaacaagtgtcacagtgagcaaatagaa
catctacagtttctgagcaagttgaaattgttctgtgtcctggactttgatcctgactct
gcagctcctggtggcgtatgcagttcatacagagaatcaagagtggcaaatctccatctc
ccagcccaattccaaggcgaaccaaatgttgtgataaaaaatctcaacctgtataagcag
accagctgggtgttttgtaatgggaggcatgaccttgacagggaatcggatagacagctg
gactacaaagactggttcaggggaaaacgcagagagattgagcatatggtttcattcatt
tgcaaacctgaagttcttccaaatggaagaactcttgtcatatttcttttactgtcacct
gtaactgatagagatcctgtctttgatactttcctggcattctactcacatgccgaggaa
agcattgtgagtatttgtgaatctaggagcacatttgagaaatggaaagacttgatacag
gagaaatgtgagtctgacatcaccaggcaatcaatatttgaattaacactcggtgaagtc
aatggtactataatgtcacttggaccacacaatcagccatcaggaagactccttccatct
tctgactccagcactgttgttctccaacaaaaggatgaagaccggatgacagctctagac
attttgtgtcagaatgaatgtgagaaagtctatgatgaaaattgcacagagtttcaagac
ttcaaaattaaagttgaagaggagttctacagagggggtaaagtcaactggtggaacttc
tatttttgtgagaaacccaaagcaaagcctttcattagaagagacaaatatgacaatctg
aaaaagatggtgaaatatcaagatcccaaaaccacatgtgttttgctgaatttgttccat
cacccaggttgcggaggcaccaccttagccatgcatgtgatgtgggatttacgcagagtg
ttcagatgtgctgtgttgaaggacaatacattaccaaaagctgaagtggcttttcaagtc
aaaaacctaatgaggctcgggagccagaaatccacaccagttctgctgttagtagatgac
tcaaaggaagcagagaacacacaagctctccagaactgcattcgccaaacttttgaagag
gaaaacacaagcagaactgtagaagattcatcaaactcaaaagtcattattgtgagttgt
gttcgttgccataaccctgaggaccagttcaaacagtgctcaacaaacagactgcagata
actgctaaactgaccaaaaaggaacaagataattttgaggaaaaactggtggaacttaaa
ggaagtcatgaaaaacctgaaaacttctacagttttatgatcatgaagagtaactttgac
aagaagtacatagctgatgttgtgagcaacactctgaaggacttggacatgagcacaaag
aaagctcaactccttgctttcttagcactgttgaactcatatgatgcagaatcagacata
tctatgtctctctgtgaggaatttttggggatgaaaagtttgcaaatggcttactggggt
caagatcatgtacttgacagaatggagccttactccaatttgctaaaacaattcaatgtt
gaggaacgtggaagatacaaagcaattcgaatccttcatcatgatatagcctctgcatgt
cttgaagagttggacagacgctacaacattaaacggagtgaaataaccttggacatgctg
cactgtgatatactgttcaaaccccgtgtagtaaaagacaccctcatgctaacaattcaa
cgcgtgctagttgaaaggcagcgcaaaaaagttggagcgactcatttttctccattgata
gaaaagattcacagtcaagcgggaggacaaaacatccgagacatctttgtgaaagcatct
tcccggtttgttacaagggcatctattcctcaagctcttgcaaggtatctctacctctat
gagcaagattttccccaagcactcatttgggcagtaaaggccatgggcgtcaaagaaaac
tcatacacagctgatacagttggacaggtttacaaaagtaatcttaaacataatattcag
agtgaaaagctaaagactccactcaagccagaggactttgagactaacctaaagatagca
caaaaagcctcaaatgcctttcaaatggctcaaaagctggccatgaagaatgaaacggaa
gagcaaactgatgaaaatctcacaaaaacaccctacaacacctctggttatgtgggagag
atggaaactacactgacagtctttgaaatgataagcaacctgccgttctttgaaggtact
gataaagtgaaaaggatgaacatgcagagctttctgaaaggaacattatccatcaaacat
gtgcccaaagaagataacgaaatcaacagtaaatatgttgatattatcaaagaacataca
caatttctccttgctttgaaacctcaggtcaaggaagtttttgaattcttcaatggttac
ttcacatacataaaaggaaacaatacaggagagcttgaatcactgaatcagaagaaaatc
tctgatcatttcaccagatacataacactggtctgctcttccccagcggaaatatttaaa
gaacgagcggacaaccctgaactcagattaagcatggatattgaagagcataggatgttt
ttggaggaaaagaatgcagacacctttgcagggatacttgcaaagttgcatcaaaagatc
gacaagactgcagaggaagtggaaaaaatcacagaatgctacacattcctgcgccataat
tctgtgcaaaatagaaaagtagaaaccaatttcattttggtaaatataattctccacaca
ctgaagccaagatctaaacacgtgaagagacacaatgaactcagtgatattcttatgaaa
acattgcaagatataggattgcaacatccctacccagagccatactatctggctttgttg
ttgctttggccagattcaaatgcagaagacaccaatataagggcatatgtgaactcactt
gggaagtcatcccacaggcaaatgtcttatttgttgagaaagagcagcaccattgctcac
ttctacttgggtccaaaagaaggattacaaagacttgtaactaaacccaaacttgatgag
tgtttttcacgcctaccacgtgctgatttggcccaactttggcggagtggaaacattttt
aaggagagggaaatcgttgaccgtctctatagggtcaatggaaccgttgagcaatcagaa
ctttatgccaattacggcaacctcaaaatcccagttcggccagcctatctgggtggaata
agaagtggtttcagcactgaaaaggtgtcgttcttcttaggatttgccatagatggacca
cttgcatacgatatcaagtag
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