Oncorhynchus tshawytscha (Chinook salmon): 112252099
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Entry
112252099 CDS
T05605
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112252099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112252099
Spliceosome [BR:
otw03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
112252099
Complex B
112252099
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
112252099
NCBI-ProteinID:
XP_024278818
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All DBs
Position
LG01:46855381..46871257
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AA seq
498 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPFLTQLEKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA
ETRDERLERKRREKIERRQTVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIYIVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDHPPIGGERERERGPEPRGE
RRERSRERERGVEKERGGERRRSRSRERRRRSSRSRERGDRGLVQAGPAEESVGGGRRRD
RERERGGGGPGGDSHSRERSRDKGERKRRSRSRERKRDRERGKGGEGDEGLVLGDGMIGE
GGERMPEEPSVGEEVGEERGGRERDRDRERDRDRRRSHRDKDRERDRERHRGDREKDREH
KRDRERGGGERREDRHGSLLLPSAEQNDVGNGEEGDAPPQPEENSQDGLMMDQESVQSGE
GYVSNENGYKVETQAEEY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttttaccccccaatctgctggccctatttgcgccgcgggaccccatacca
tttctgacccagttggagaagcttccacatgagaaacaccacaaccagccatactgtgga
attgctcccttcatcaggcactttgaagatcccagagatgcccctccccctactagggca
gaaactcgtgatgagaggttggagagaaagaggagggagaagatcgagaggaggcagacg
gttgtggagacagaactaaaactctgggatccacacaatgaccccaatgctcagggggat
gccttcaagaccctgtttgtggctcgtgttaattatgacacaacggaatccaagcttcgc
cgtgagtttgaggtctatggacccatcaaaaggatctacatagtctacaacaagcggtca
gggaagcccagaggctacgccttcatagagtacgagcacgagagagacatgcactctgcc
tacaagcatgcagacgggaagaagatcgacggaaggagagtgctggtggatgtggagaga
ggccgcactgtgaagggatggcatccccgcaggctaggcggtggtcttggtgggacaagg
agaggtggggctgacgtcaacatcaagcactctggaagagacgacacctcacgttatgat
gaccaccccccaattggaggggaacgtgagcgcgaacgtggacccgagcccagaggggaa
cgcagagagcgcagccgtgagcgcgaacggggggtggagaaagagcgcggtggcgagaga
cggaggtcccggtcccgggaaagacgcaggcgcagctctcgctccagggagaggggtgac
aggggtctggtccaggctgggcccgcagaggagagcgtagggggtggcaggagacgagac
cgagagagggagcgggggggaggagggccagggggagacagtcatagcagggagaggagc
agagacaaaggtgaaaggaagaggaggagccgcagtcgagagcgcaagcgagaccgggag
aggggcaagggtggcgaaggtgatgagggcttggtgctaggagatggtatgataggggag
ggaggagagaggatgcctgaagagcctagtgtgggtgaggaagtgggagaggagcgcggc
gggagggagcgtgacagagacagggagcgggaccgtgaccggaggcgcagccacagggac
aaggaccgtgagagggaccgtgagaggcacaggggcgacagggagaaagacagggagcat
aagagagacagggagcggggtggcggggagcgcagggaggaccggcatggctctctcctg
ctcccctcggccgagcagaacgacgtgggtaacggggaggagggcgacgcgccgccccag
ccagaggagaacagccaggatgggttgatgatggaccaagagtcggtgcaatcgggggag
ggttacgtttccaatgagaacggctacaaggtagagacccaggcagaagagtattaa
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