Oncorhynchus tshawytscha (Chinook salmon): 112252103
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Entry
112252103 CDS
T05605
Name
(RefSeq) survival motor neuron protein isoform X1
KO
K13129
survival motor neuron protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112252103
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
112252103
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GFIT
Motif
Pfam:
SMN_Tudor
Tudor_3
TUDOR
SMN_YG-box
Motif
Other DBs
NCBI-GeneID:
112252103
NCBI-ProteinID:
XP_024278820
UniProt:
A0A8C8M566
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Position
LG06:15615251..15630616
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AA seq
383 aa
AA seq
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MAECPASIVLRSEGVESSNIEKESVTKLLPNLQKLFESELSESCVPSLETVDPRANSKSD
EKESDEKLADNPQKLSESCVPSKGPFDPKANLKWEIGSHCKAVWSEDGRVYPATLVWLEG
ERCKVKFDNYGNEEEMDLSAMLPEAADQPRKEKRVWMLGSRCRAVYSEDGLVYPAVLVWM
RGERCRVKFEGYGNEEELELSTLLSPDDLGRHCGRATAKAVEGFRSTSNNSADWKKDREW
RTPQQEGQAEPSSPRPPEFPPGKGFNLGNEQGNKKKPSSRKEEPNGRSREPNDHPFPFFP
PVPPPNGSLDFLSLLPPPPPPPCVWPPRAGLVDAGDGLGSSVTDLSSMLLSWYLCGYHTG
CYMAMQQTAASHKRAHKEKRAEE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtccagcaagtattgtattacgaagtgaaggagtcgagagctcaaacatc
gaaaaagagagtgtcacaaagcttctccccaatctacagaaactgtttgagtcagaactg
tctgaatcttgtgtgccaagtctggaaacagttgacccaagggcaaactcaaagagcgat
gaaaaggagagcgatgagaagcttgcagacaatccacagaaactctcagaatcttgtgtg
ccaagtaagggaccgtttgacccaaaggcaaacttaaagtgggagatagggtcccactgc
aaggctgtgtggtcagaggatgggcgggtttatcctgccaccctggtctggttggagggg
gagcgctgcaaggtgaagtttgacaactatggaaatgaggaagagatggacctgagcgcc
atgctacctgaagctgctgaccagccccggaaggagaaacgggtgtggatgctgggttcc
cggtgccgtgctgtgtactcagaggatggcctggtctacccagcggtgctggtgtggatg
agaggggaacgctgccgggtgaagtttgaaggctacgggaacgaggaggagctggagctg
agcaccctgctatcgccagatgacctgggacggcactgtggaagagctactgccaaggct
gtggaagggttcaggtccactagtaacaacagcgcagactggaagaaggatagagagtgg
aggacacctcaacaagagggacaagcggagccttcctcacctcgaccacctgagtttcct
ccaggaaaaggctttaaccttggcaatgagcaggggaataagaagaagccaagtagtcgg
aaagaggaaccaaatggccggagtcgggaaccaaatgatcacccgtttcctttttttcct
ccagtgccaccgcccaatgggtctttggacttcctgtcactcctgcctcctcctccacct
ccaccgtgtgtatggcccccccgagcagggctggtggatgctggcgatgggctaggctcg
tccgttacagacttatccagcatgctgctctcctggtacctgtgtggctaccacactggc
tgctacatggcaatgcagcagacagcggcaagtcacaagagggctcataaagagaaacgg
gcagaggaataa
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