Oncorhynchus tshawytscha (Chinook salmon): 112252154
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Entry
112252154 CDS
T05605
Symbol
dazap1
Name
(RefSeq) DAZ-associated protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112252154 (dazap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252154 (dazap1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112252154 (dazap1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
112252154
NCBI-ProteinID:
XP_024278907
LinkDB
All DBs
Position
LG06:17193160..17211753
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AA seq
458 aa
AA seq
DB search
MNSNLAGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK
DPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKSKKIFVGGI
PHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG
KKVEVKKAEPRDSNAPGQLGPNQWGPRGILSAANGWSAQPAQGWQQSYGPPGVWVSTGQP
LGGYGPPLSASRGAPAQPPSPFNAFLVTAAPAGGFGAPQAYAQQGYSTPPQFGYSFGTPH
GDQYAPQGVPPPPTTPGTGPLGFAPATTPTQDMSKAPTGQPDFPYSQYGLGNYPQEPSSY
GPTRPSHSNGQDVQGGSSAVPCFSDYSGLQGDGAIQCLEKERYGQDLSGFGHTFADPSQQ
TASYGAPTAQPAVGPQAAAAVFARVQNHNVTGFHPYRR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaacttggccggagatgaagttgggaaactgtttgtgggtggcttggactgg
agtacaacacaggaaactttgagaaactatttctcgcagtatggggaagtagttgattgt
gtcatcatgaaggacaaaaccacaaatcagtcccggggctttggttttgtcaaattcaaa
gaccccaactgtgtccggactgtactggagaccaaaccccataatctcgatggcagaaat
attgaccccaagccatgtactcccagaggaatgcaacctgaaaaagtacgaactaaggac
ggctggaagggcagcaaagctgacagcaataaatcaaagaagatatttgtcggcggaatc
ccccataactgtggtgaaccagaactccgggaatatttcaatagatttggagtggtcaca
gaggtggtaatgatctatgacgcggagaaacagaggccccgaggttttggatttattact
ttcgaggccgaacaatcagtggaccaggctgtcaacatgcattttcacgacatcatgggc
aaaaaagtggaagtgaaaaaggctgaacctcgggacagcaacgctcctggccagcttgga
cctaaccaatggggacccagaggcatcctgagtgcagccaatggttggtcggcacagcct
gcccagggctggcagcagagttatgggcctccgggagtttgggtgtctacaggccagcca
ttgggtgggtacgggccccctttatctgcgagtcgtggagctcccgcacagcccccctcg
ccattcaacgcattcctcgtcacagcggccccggcgggggggtttggggcacctcaggcc
tacgctcaacagggatacagtacaccacctcagtttgggtacagttttggcacgcctcat
ggtgaccagtatgcaccacaaggagtgccgcccccgcccacgactccaggaacagggccg
ctagggtttgctccagccaccacacctactcaggacatgagcaaagcacccacgggacag
ccggacttcccttacagccagtatggcctgggtaactaccctcaggagccctcttcctac
ggaccaacgcgtccttctcacagtaatggtcaggatgtgcagggaggaagtagtgcagtt
ccctgcttctctgactacagtggattgcagggagatggtgccatccagtgtctggaaaaa
gaacgttatggtcaggacctgagtgggtttgggcatactttcgcagaccccagccagcag
actgcctcttacggggcaccaacagcacaaccggcagtgggaccccaggctgccgcagcc
gtttttgctcgtgtacagaatcacaacgtaacgggcttccatccataccggcgctga
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