Oncorhynchus tshawytscha (Chinook salmon): 112252225
Help
Entry
112252225 CDS
T05605
Name
(RefSeq) tight junction protein ZO-3 isoform X1
KO
K06097
tight junction protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112252225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
Motif
Other DBs
NCBI-GeneID:
112252225
NCBI-ProteinID:
XP_024279040
LinkDB
All DBs
Position
LG06:complement(19898597..19933449)
Genome browser
AA seq
1279 aa
AA seq
DB search
MEVRFREVEPEMEELTIFEQHTITLGKDSKMGFGFAISGGRDQPNPDSGDTAVIVSDVVR
NGPAMGRLFVRDQIVMVNGVSMENVYSTFTIQNLKSCGKTANITVKRPRKIQLPASTRPS
RAASYSNLLDQDPPQRPRRYSDGSDQAHKVDRTALNRNGTAHALPLSSGYKRLPQQAFPD
KPIKATLLKKKLADEYGLKLGSQIFIKHMTETGLAAKEGTLQEGDLILKINGMTTENLSL
LETKHLVEKSRGKLTMMVLRDDRKFLVSIPEVQDSAPNSEEDHRSNSSSELEDISDLDTD
IPTPRDRVSRSATRERRTRRRADPPLVVKSRDPSPVRSTLSRPVAKAYPSHRALSESESD
RSASPTPVRKDSPDHANKYRTLSGLSTLPNPKASPAVFDWVAPRSSRPTSSTLRPRKVVS
ESDSDHSASPPPRRGESSRVIEDHSRYRVLPNLPHPRTLRASPITIRQDPPRRVSSPVKA
PLPDSESESDSSSGPAHSQDSRSRYRATPLVAMFPQVEPPKWKAPSVTRSNPAKGNSGSE
SEASYASVPRRESTDSGGSISRVSKNRFRALPEMKSSPAPVVRQDPPRQGMTSSSPVSGS
SDSDRTPSPPRRSGSTDVESNHSIPYRVNGDVRTGISMKSNPPVYSKTEEPLYSLPPDSI
PTPSLGSDLNTVSFVKEGSVGLRLVGGNDVGIFVDGVQPNSPAQEQGLKEGDQIMQVNGV
DFGYFNREEAAMFLINIKRGEPVNIRTQNKMDIYKKILKSNLGDSFYIRTHYDNVAEGDI
GLAFTRGEVFRVVDTMHRGKLGKWLAIRMGNDLHELDKGTIPNQVRAETLARMEQAQRAS
GEGDRQVSGPRVEFWKLRGLRGAKKNVRRTHDDLLQLTIQGKFPAYERVLLRKANFKRPI
VIMGPLNDVAMEKLAREMPDEYEVAEMAPRSSGADTTSTVIKLDTVRRIAEKNKHPLLDI
TPTAVEHLNYIQYHPMVLFLDPHSRKDVKVMRQRMCPNSNKSSRRLYTQALKMRKHCSHL
FTACIDLQPSSNVWYETLKDKIRHQQAKPVWDSEVTLEGGGEEELDALDRTHSDYLSAAS
ELEDTDGEVYTDNEDLEEPFDPSNQPRMSRLTALARSSEPASEYPSPESLREVQPLMHVS
EPRSTRRPSDSPPHVDVADEIRPYHSFSDSDFRAIDQAVPTTPSDTPPDFIAPDPRVSVL
EPPLAELLPESPPAVTLSVIEKKLQQTRMAESQERKASPLFIVLAHHQAVQTRRTRIRGS
DSSDNEETDDIEWGPATEL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgagattcagagaagtggaaccggagatggaggaattaacgatattcgagcag
catactataacactcggcaaagattccaagatggggtttggctttgcgatatcaggaggc
agagaccagccgaacccggactcaggggacacagccgtgatagtttcagatgtggtacgg
aacggacccgctatgggacggctgttcgtcagagatcagatcgtcatggtcaatggcgtg
tcaatggagaatgtctactctaccttcaccatccagaacctcaagtcatgtggcaaaaca
gccaacataacagtgaagcgtcctcgtaagatccagctccccgccagcaccagaccctcg
cgtgctgcctcctactccaacctgctggaccaggaccccccacagaggccccgacgctac
tccgatggtagtgaccaggcccacaaagttgaccgcaccgccctcaaccgcaacggaacc
gctcatgccctgccgctaagttcagggtacaaacggctcccacagcaggccttcccagac
aagccaatcaaagccaccctgctgaagaagaaactcgcagacgagtatggactgaagttg
ggaagccagatcttcatcaaacacatgactgagacggggctggctgccaaggagggcact
ctgcaggagggagacctcattctcaagatcaatgggatgaccacagagaacctgtccctt
ctggagaccaagcacctggtggagaagtcccggggaaagctgaccatgatggtcctgcga
gacgaccgcaagttcctggtcagcatcccagaagtgcaggacagtgcccccaacagcgag
gaagaccaccgcagcaacagcagctctgaactggaggacatttcagacctggatacagac
atccccactcccagagacagagtgtcacgctctgcaactagagaacgacgcacacgcaga
agagctgatcctcctctagtagttaagtcacgtgatccgtccccggtgcggtcgacactg
tcccggcctgttgctaaagcctacccctctcaccgagccctctcagagtctgagtctgac
cgtagtgcatcacccactcctgtcaggaaggacagcccagaccacgccaacaaatataga
actctttcagggctgtccaccctccccaaccccaaagcctcacctgccgtctttgactgg
gtcgccccacgttcctcccgtcccacctcctccaccttgagacctcgcaaagtggtgtca
gagtcggactcggaccacagtgcctccccaccccccagaagaggagagagttcccgagtc
atagaagaccactccagatacagagtgctccctaacctgccccaccctaggacactgaga
gcctcccccatcaccattcgtcaggatcctcctcgacgggtctcctctcctgtcaaagcc
ccactcccagactctgaatctgagtcagacagcagctccgggcccgcccacagccaggac
tcccggagcagatacagagccactcccttggtagccatgtttccccaggtggagcccccc
aagtggaaagcccccagtgtcacaaggagcaatcctgctaaagggaactcaggatccgag
tcggaggcaagttatgcatccgtgcctcgacgggagtctacagacagtggaggctccatc
tccagggtatccaagaacagattcagagctttgcctgagatgaagtcttctccagctcca
gtagtgagacaggacccccctcgacaaggcatgacctcctccagtccagtctcaggttcc
tctgattcggaccgtacaccctcaccccctaggaggtctgggagtacagatgtggagagc
aaccacagtattccatacagagtcaatggcgatgtccgcactgggatatcaatgaagagc
aaccctccagtctactccaagacagaggaacccctctactccctgcccccagactccatt
cctacacctagcttgggctcagatctgaacacagtgtcgtttgtgaaggaggggagcgtt
ggtctgagactggtgggaggcaacgatgtgggcatctttgtggatggggttcagcccaac
agccccgctcaggagcagggtttgaaggagggggaccagatcatgcaggtgaatggggtg
gactttggttatttcaaccgtgaggaagctgcaatgttcctgatcaacatcaagagaggg
gagccggtcaacatccgtactcagaacaagatggacatttacaagaagatcctgaagtcc
aacctgggggactcgttctacatccggacccactatgacaatgtggcggagggcgacatc
ggcctagccttcaccaggggagaggtgttcagggtggtggacaccatgcacaggggcaag
ctgggaaagtggctggctatacgcatgggcaacgacctgcatgagctggacaagggcacc
atccccaaccaggtcagggccgagactctggccagaatggagcaggctcagagggccagt
ggagaaggggatcgccaggtatcagggcccagggtagagttctggaaactacgggggctc
agaggggccaagaagaacgtccgcaggactcatgatgacctgctccaacttaccatccag
ggcaaattcccagcatacgagagagttctgctcagaaaagctaatttcaaacggccaatc
gtcatcatgggtcctctgaacgatgtggccatggagaagctggccagagagatgcctgat
gaatatgaggtggcagagatggctcctcgtagtagtggcgcagacactacttccacggtc
atcaagctggacacagtacgaaggattgcagagaagaacaagcaccctctgctggacatt
actcctactgccgtggagcatctgaactacatccagtaccaccccatggttctgttcctg
gacccacacagcaggaaggatgtcaaggtcatgaggcagaggatgtgccccaactccaac
aagagctccagacgcctctacacacaggccctcaagatgaggaagcactgcagccacctg
ttcacagcttgtattgatctccagcccagctctaatgtgtggtatgagactctgaaagac
aagatcagacaccagcaggccaaacctgtctgggactcagaagtcacgttggagggaggc
ggagaggaggagctggatgcattggaccggacccactcggactacctgagtgctgccagc
gaactggaggacacagacggagaggtctacactgataatgaggacctggaggaaccattt
gatcccagcaatcagccccggatgtccaggctcaccgctctggcccggtcttcggagcct
gcctctgagtacccctcccccgagtccctgagagaggttcaacccctgatgcatgtgtct
gagcccagatcgacccgtcgtccatctgacagccctccccacgttgacgttgctgatgaa
atccgaccctatcatagcttctcagattcggacttcagggccattgaccaggctgttccg
accaccccctcggacacaccccctgacttcatagcccctgaccccagagtctctgtgctt
gagcccccattggctgaactgctgccagagagccccccagctgtcacactgtcagtcata
gagaagaaacttcaacagacccgtatggcagaatctcaggagaggaaagcgtctccattg
ttcattgtgttggctcaccaccaggctgtccaaacgagacgcactcggatccgaggcagt
gacagctctgacaatgaagagactgatgacattgagtggggtccagctacagaactttag
DBGET
integrated database retrieval system
