Oncorhynchus tshawytscha (Chinook salmon): 112252230
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Entry
112252230 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252230
04121 Ubiquitin system [BR:
otw04121
]
112252230
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112252230
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112252230
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112252230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zinc_ribbon_9
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
C1_2
zinc-ribbons_6
DZR
DZR_2
Motif
Other DBs
NCBI-GeneID:
112252230
NCBI-ProteinID:
XP_024279056
LinkDB
All DBs
Position
LG06:21239069..21245284
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AA seq
354 aa
AA seq
DB search
MSLASQRRHDIVYQCDLGFLLENHTRTKKMAEAPPWPSRFFCHRCSEEISPRLPDYTCPR
CESGFIEELLEERRSENGSTSTISSGDQNQHPFENVDPSNIFTFPSGYGQFAMGVFDDSF
DFGAGLGGAGLGGAGLGGAGLRTEDNRDAENRREREMASRQRYGARQPRGRHGVRRQAGR
PEGVPTLEGIIQQLVNGIIAPAAVPNIGVGPWGVLHSNPMDYAWGANGLDAIITQLLNQF
ENTGPPPADGDKIMSLPTVLITQEHVGSGLECPVCKEDYSAGENVRQLPCNHLFHNDCIV
PWLEQHDTCPVCRKSLSGLNTAMNPPGLSGMNFASSSAPPSSSSTSNENSANNS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagctagccaacgtcgacatgacatcgtctaccagtgtgatttgggatttcta
ttggagaatcatactagaaccaaaaaaatggcggaagcacctccatggcccagccggttt
ttctgtcaccgatgttcggaagagatcagccctcgtctccccgattacacatgtcctcgg
tgtgaatctggctttatcgaggaactgctggaggagagacgcagtgaaaatgggtccaca
tccaccatctccagtggtgaccagaaccaacatccatttgagaatgtggacccttcaaat
atatttacgttcccctcgggttatggccagtttgctatgggtgtctttgacgactccttt
gactttggagcggggctgggaggagctgggttgggaggagcagggctaggaggagctggg
ttgcgaacagaggacaaccgcgacgcagagaatcgacgagaacgggagatggcatcacgg
cagcgatacggcgccaggcaacctcgcggtcgccatggcgtcaggaggcaggcagggaga
ccggagggagtgcccacattagagggaatcattcagcagctagtgaatggaataatcgcc
cctgcggcagtgccaaatattggtgtgggaccctggggcgtgcttcactcaaaccccatg
gattacgcctggggtgccaacggactagatgcaatcattacacagttattaaatcagttt
gagaacactggtcctccgccagctgatggggacaaaatcatgagccttcccacagtccta
atcacacaggagcatgtaggctctggtctagaatgtccagtgtgtaaagaagactacagt
gctggagaaaacgttaggcaacttccatgtaatcatttgtttcacaatgattgcatagta
ccctggcttgaacagcacgacacatgtccagtgtgcaggaaaagcttaagtggactgaac
acagccatgaatcctccaggtctatcagggatgaactttgcctcttcctctgcacccccg
tcctccagctcaaccagcaatgagaactcggccaacaactcctaa
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