Oncorhynchus tshawytscha (Chinook salmon): 112252231
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Entry
112252231 CDS
T05605
Name
(RefSeq) basigin isoform X1
KO
K06535
basigin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112252231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112252231
04515 Cell adhesion molecules [BR:
otw04515
]
112252231
04090 CD molecules [BR:
otw04090
]
112252231
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
112252231
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Other
112252231
CD molecules [BR:
otw04090
]
Proteins
112252231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
Ig_VEGFR-1-like_5th
ECSCR
Motif
Other DBs
NCBI-GeneID:
112252231
NCBI-ProteinID:
XP_024279058
UniProt:
A0AAZ3STC5
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All DBs
Position
LG06:21252828..21262764
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AA seq
319 aa
AA seq
DB search
MKVLWGLSALLLCLNRANAQTEPVPDYLQESFVGVVEQNNRRTLYVHIYLDIPSNDWIRL
FQPHLLLTDPLIEAEPMEVYNQTSAVLSCKLTDPPSTVKGHYWMRNGKVIESSKHNLPTL
YTEHTLAKIDSHSGGLYECVFLSEPEVKTTIEVKTAPLVSAYKRSEHGNEKDKGVLVCVS
YGYPLPTDWKWYKLEGEDKTAITNGTDRYEIKSTPNRTTLTIDNLDIAMDIGDYICDGTS
EFGSTSNKVHLRVRSRLAALWPFLGIVAEVIILVSIIFIYEKTRKPDEINDDDDSGSAPL
KSNANTDHKNKDVRQRNSN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgctgtggggtttaagtgccctcctattgtgcttgaaccgagccaatgcccag
acagaacctgtaccggactaccttcaggagagttttgtgggcgtcgtagagcaaaacaac
cgacgtacactatatgtacacatttatttggacattccttcaaatgactggattcggcta
tttcagccacacctgttgctgacagatcccttaattgaagctgaacctatggaggtatac
aaccagacctctgctgtcctctcatgcaaactgaccgaccccccgtccacagtcaaaggc
cactactggatgaggaacggcaaagtgatcgagtcatccaagcataacttgccaactctc
tacaccgagcacaccttggctaaaatcgattcccattccggtggattgtatgagtgcgtc
ttcctttctgagcccgaggtgaaaacaaccattgaagtcaaaactgctccacttgtctct
gcctacaaacgctctgagcatggtaacgagaaggacaagggtgtgctggtgtgtgttagt
tatggatacccactgcccactgactggaagtggtacaaactggagggagaagataagacg
gccatcaccaacggtaccgacaggtatgagatcaagagcacccccaacaggaccaccctg
accattgacaacctggacatcgccatggacataggcgactacatttgcgacggcacgagc
gagttcggctcgacctccaacaaggtccacctgcgcgtccgcagccggctggccgccctc
tggcccttcctgggcatagtggctgaggtcatcatcctggtcagcatcatcttcatctat
gagaagacgagaaagcctgatgagatcaacgacgatgatgactcaggatctgctcccctg
aagagcaatgctaacacagaccacaagaacaaggacgtcaggcaaaggaactccaactga
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