Oncorhynchus tshawytscha (Chinook salmon): 112252233
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Entry
112252233 CDS
T05605
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112252233
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
112252233
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Com_YlbF
LPD1
Motif
Other DBs
NCBI-GeneID:
112252233
NCBI-ProteinID:
XP_024279063
UniProt:
A0A8C8I763
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Position
LG06:21268699..21380021
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AA seq
904 aa
AA seq
DB search
MDGSITSAGSLAQGHGTEVAGATTTATVKKDPRVSFSNAPSRKASSSVQNQQKMNSVSCF
KSEDISQIVTDDGEPNDNRTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQQRVKSAGN
WIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITFFKDETTAPWIIFNVVSDTFFLMDLVL
NFRTGIVLEDNTEIILDPKKIKRTYLKTWFVVDFISSIPVDYIFLIVEKGIDSELYKTAR
ALRIVRFTKILSLLRLLRLSRLIRYVHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWD
GCLQFLVPMLQDFPQDCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDI
WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIH
DYYEHRYQGKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFANTDPNFVTAMLTKLR
FEVFQPGDYIIREGTIGKKMYFTQHGVTSVLTKGTMGMKLSDGSYFGEICLLTRGRRTAS
VRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSG
VFNNRENEMIQEIVKYDREMVQQVDLHRPRAMSMCNPPTHGGIFTPSGPPQSSAIATLQQ
AVAMSFCPPMVGPLAGGGGLQSPRMVRRFKVMQSVSSPVPASPPPQTQQTMHPQLYASGA
FVAALSSPPIQSPLAAGGRTFQYGPSFGSQISLVQQVVPSPTHRPKTHNSTRSLHMGSLG
QNARALSASQPSLPQGGGAQPVAPCPSQSARVSSTSIGPPQAPSGNAGVRSAMTHRMVLP
HQMSAGAFPLASLPGTVTSLGMGMGVGTGAGLAPALLDSGLPKSDFVASLPETDRARSRL
SSNL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacggttctattacctcagcggggtccttagcacaggggcatgggaccgaggtggcc
ggggcaacaactactgccactgtgaaaaaggacccccgagtttccttctcaaatgcccct
agtagaaaagcatcgtcctctgtgcagaaccaacagaagatgaattctgtctcatgtttt
aaatctgaggatatatcccagattgtgacagatgatggggaaccaaatgacaatcggaca
tacatgcagcggcaatttagttccatgcttcagcctggagttaataaattttcactgcgt
atgtttgggagccaaaaagctgttgaaaaggaacaacagcgcgtcaaatcggccggtaat
tggattattcatccatacagcgatttcaggttctactgggatttcaccatgttgatgttc
atggtgggcaacctcatcatcatcccagtggggatcaccttcttcaaggacgagaccacc
gcgccctggatcatcttcaacgtggtctctgataccttcttcctcatggacctggtcctc
aacttccgcacaggcatcgttttagaggacaacactgagatcatcctggaccccaagaag
atcaagaggacgtacctgaagacctggtttgtggtggactttatctcctccatccctgtt
gattatatcttcttgatcgtggagaaggggatcgactctgagttgtataaaacagccaga
gccctgaggatcgtgcgctttaccaagatcctcagtctgctgaggctgctcaggctgtcc
aggctaattcgctatgtccaccaatgggaagagatcttccatatgacctatgacctggcc
agtgcagtgatgcgtatcttcaacctgattggtatgatgttgctgctgtgtcactgggat
ggctgtttgcagttcctggttcccatgctgcaggatttcccccaggactgctgggtctcc
cttaacaagatggtgaatgactcgtggagcgagctgtactcctttgccctgttcaaagcc
atgagtcacatgctgtgtatcggttatgggcgccaagccccagagagcatgtctgatatc
tggttgaccatgctcagtatgatcgtgggagccacctgctacgccatgttcatcggccac
gccaccgcccttatccagtccctggactcatcccggcgccagtaccaggagaagtacaaa
caagtggagcagtacatgtctttccacaaactgccagctgacttccgacagaaaatccat
gactactacgagcacagataccagggcaagatgtttgatgaggagagcatcctggaggag
cttaatgaaccactgcgggaggaaattgtcaacttcaactgccgtaagctggtggcgtcc
atgcccctgtttgccaacaccgaccccaactttgtgacggctatgttgactaagctccgc
tttgaggtcttccagcctggagattacatcatcagggagggcaccatcggcaagaagatg
tacttcacccaacatggtgtgaccagtgtcctgaccaaaggaaccatgggcatgaagctc
tcagatggatcctattttggagagatctgtctgttgacccgaggtagacggacggccagt
gtgcgagcggacacgtactgccgtctctactccctgtctgtggataactttaatgaggtg
ctggaggagtatcccatgatgagacgagccttcgagactgtggccatcgaccgactggac
cggatagggaagaagaactcgatcctaatgcacaaggttcagcatgacctcaattcgggc
gtcttcaataaccgggagaacgagatgatccaggagattgtgaaatatgaccgtgagatg
gtgcagcaggtggacctgcataggccacgtgctatgtccatgtgcaacccacccacacat
ggcggcatcttcaccccctctggccctccccagagctcagccatcgccaccctccagcag
gctgtggccatgagcttctgtccccccatggtaggccctctggcagggggtgggggcctg
cagtccccccggatggtgcggaggttcaaggtgatgcagagtgtatccagcccagtgcca
gcctcccctcccccccagacccagcagaccatgcatccccagctatacgccagtggtgca
ttcgtcgcggccctctccagcccccccatccagagccccttagcggctgggggacggaca
ttccagtacgggccctcttttggctcccagatctccctggttcagcaagttgtgcccagc
cccacacacaggcccaaaacccataacagcacccggtctctgcacatgggcagtctgggt
cagaatgccagggcactgtctgcctctcagccctccctgccccagggaggaggggctcag
cccgtggctccctgcccatcacagtccgcccgtgtctcctccacctccatcgggccccct
caggccccctcgggcaatgcaggggtcaggagcgctatgactcataggatggtgcttccc
caccagatgtctgcgggggcgttccctctagcctccctcccggggactgttacatcgctg
gggatgggcatgggagtgggcacgggggcaggcttggcaccagccctgctggactcagga
ttacccaagagtgattttgtagccagcctccctgagacagaccgtgctagatcgaggctc
tcttccaatttgtga
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