Oncorhynchus tshawytscha (Chinook salmon): 112252249
Help
Entry
112252249 CDS
T05605
Name
(RefSeq) A-kinase anchor protein 13-like isoform X1
KO
K16529
A-kinase anchor protein 13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252249
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112252249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
Ank_5
C1_2
Ank_2
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
112252249
NCBI-ProteinID:
XP_042179010
LinkDB
All DBs
Position
LG06:22203803..22384240
Genome browser
AA seq
2477 aa
AA seq
DB search
MKLNPQQAPLYGECLLTVQLGDGERLEDEENVEFYLLFAGTTQRHLTSTLRISHVTLQAV
CPAHDCCESVQVTLCSARSDGSVDPVAEERFQFVQDLAFDMAQFLVSAAGRADGLEGALL
LDECQIPLQECERLDESLSLALRHLALPQGWSVLGSNVGTPPGPNLDNSIAEPGPHETLL
HFAARRGLQRVALFLLQQPGGREALRLPNKQGSTPVSVAEKRGHDQLQQLFTEVETLSET
RIKTEERQCYPGGRVLQHHPKLNTYTLTVDTLLGKPLPSLKGEVEELQKLIQRHRDDKED
HVLQQQSPDELNTTAGSSGISNTSTHSATESQPPHSHAQQRREGETPAFSAPSCGDQQEE
ADRERTGVITATQGSKAGRCKRNQEENEKWRAETETGDKAVAAPTKASRAMGHAQSQEHT
EAKHQSLRTTGSSSSGCGDTSVQRTMERQGEPENIQEMESGAPVENGQHDKHSVEVEIEY
AEATSECTLQTLTGAVSRHEAQAVEAQDSEQRQETTTAVTSYSVEPEWADNSNQTWESER
GGTDERKTEAGNPSQQTNGSTETTSSRSGETDTNSMKQSPIMVEGEIKSSHSHRPGCVTA
KEPSEQQVLDQQVEDTVEVVATPPQPRRDQDSTHSQGHETGQECEEQPSTDLASRTAEDR
ESGETMGRQHCDVTVHTSSFEEGELVQSVGCSTDKLPKEGTVTGQEVPGKKVSVQWASFE
EADSLACREEIAATAVAVVAVAVAAAVASLEQCNSNSMLEGGQVQEAAAESQSKHQTGRK
DTARRSGVTVSEATENLSTSDRGPTVSASPLEEDVMVKNPSKGADEPHVRQGEENSDLSN
TTHGSENGVEAQLPGLSLTQEESVEASRECADSHSHTLLHDERAVDRQSAEVISSSSSIS
PERSSELTHQEAIPESPAPPAPPEHTHTPSDLTLTTLTHPDSGTSPNPELTSPLELDNGK
GLYDEQYSSSVEVVIGMSLGLQYSDTLESLDGVCVRTLDTKEEHSEDLRQLDKPVKDKDI
VCPSQGEEKEKKESLSDTADSTLIHKEKESFYPVQPCTDPTLQVKTTIPECTEFPVSPCS
EIVGGSVSTTGALRDSVSDLDSLGEEGVFRKGEEAVTRPSESNSGVSVSFSSIDDVASVG
PLSASSQGSVGPLSVSSQGRVGPAWAGAGVLSTRASWSAGDAWQTTGRGGEEDERKDKLT
EVPVCSAILRSSIRSLSPFRRHSWGPGKNPAGDTDMNQRSLLQGQGEGKPRKPTFHRRSM
SWCPSNVPPPHLEQIDSRSYSLEGLAGEEDAGKISSGVGTVARLDSEERGSLLSLTEEQE
SDLGDYSSLDSQKSGRVLPVRHSCPSIPHQALTKSVSMLAISHRDLDGMGSASLEHSISE
EDPGPLRSDSEGRQGTKVSRTFSYLKSKMSTKKNKEKEKAQGKDKDPKEKEKKNLNGHLF
SSVNPAPSSTCHQCNKPIITKEAFLCTNCNAQVHKGCRERLPVCVQVKMKQQKQQTVPDS
ESISGVVLRSKSTSSTSSRERPWSAILSPDDQAMVTVAAVVPRRNHSILPFNKSNLSKSI
SISNIAGPLMDEMPLKGLKYLSQSTDSLHKTSKVNESTESLTDEGTEMMDSQLMGEFEAE
SKDLEADSWTFTVDKKYVKGLKKEVVKRQDVIYELVQTEMHHVRTLRIMSEVYSKGLQKE
LQLEALTVERVFPMLDELLDLHTDFFTHLLERKRESSIEGRDDGSFLIHKIGDVLVSQFS
GPNADRMKKVYGKFCSRHNEAVNFYKELHTKDKRFQAFIKKKMSSTIVRRLGIPECILLV
TQRITKYPVLLQRILHHTKENEEDHDDITQALRLVKEILNAVDNKVNEHDKKKRLKEVYS
RTDSKSIQRMKSGQMFAREDLVRGRRLLHDGPLQLKNSAGRLKDVQAMLLSDVFVFLQEK
DQKYVFASLDQRSTVISLQKLIVREVANEERGLFLITAGIEKPEMVEVLASTKEERNTWM
QLIQDAMHSIEKDDDEGIPSETEEDKRLLETKAREIRELLRKKDEQIMSLLEEKVKVFRD
MCEGPAEETKQTQSIRTKMLFRATPDDITKGEPIMKDALREVETLHVLVNGSLGGAVGQQ
VSSTQDASGGSVGPVCLPRRAETFGGFDSHQMNISKNGEKEEGDDSLDLRRTESDGVLKK
GGNNNLLLLLKRNSEQVLQSVTHLHDLLSTLQAVVVQQDTFIEDQRHALAERPASRHSST
SSLSSSSSRPNSLIEQEKQRSLEKQRQEVANLQRQQVAHADERRRREREWEVRESGLGDR
EVQVKEQEEETVKRRRQMEEERKELLRRKEEYQRDLERLRDAQRKLDRDKETLQREAEMV
EQMKKAEAEQAHRTQRTPSTTSEESMKFQSSTSLDKEPGGGEAELSSSPATKDPFLRMGS
KRKGKNLNPFSSSSSSSNASSKAQSSTEGQNQIPNRLMQLAKTKDKKEKKKKKGKGQQSQ
PDTGVTEPQCDGKIFFC
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaatccacagcaagctccgctatatggtgagtgtcttctgacggtgcagctg
ggtgatggagagcgtttggaggatgaggagaatgtagagttctacctgctttttgctggc
accacccagaggcacctgaccagtaccttgaggataagccatgtcaccctacaggctgtg
tgcccagcccatgactgctgtgagtcggtgcaggtcacgctgtgctctgcgcggtctgat
ggctcggtggaccctgtggccgaggagcgcttccaattcgtccaggacctggccttcgac
atggcccagttcctggtgagcgctgcagggcgggccgacggtctggagggggctctgctg
ctggatgagtgccagatccccctgcaggagtgtgagagactagacgagagcctctccctg
gcactcagacacctggccctgccccaggggtggagcgtcctgggctccaacgtaggcaca
ccaccaggccccaacctggacaacagcattgctgagcccggtccacacgagaccctcttg
cactttgcggctcggcgcggtctgcagagggtagccttgtttctgctccagcagccagga
ggcagagaggctctcagactgcccaacaagcagggctctacaccagtcagcgtggcagag
aagaggggccacgaccagctacagcagctcttcactgaggttgagaccttgtcagagacc
cggataaagacggaggagagacagtgttacccaggaggccgagtgctgcagcaccaccct
aaactgaacacatacaccctgacggtggacacgttgctagggaaacctctgcccagccta
aagggagaggtggaggagctacagaaactcatacagcgccacagagacgacaaggaagat
catgtgctccagcagcagtcaccagatgagctgaacactacagcaggatccagtggcatc
agcaacacatcaacacactcagccacagagtcccagcccccccacagccatgcccagcag
cggagagagggcgagactccagctttcagcgcaccatcctgtggagaccagcaggaggaa
gctgatagagagaggacaggcgtaatcactgccacgcagggcagcaaggcagggcgctgt
aaaaggaaccaggaagagaacgagaagtggagagcagagactgagacgggcgataaggct
gttgctgctccgacaaaggcttcacgagccatgggccacgcgcagtctcaggaacacacg
gaagctaagcatcagtccctgaggactacaggcagcagcagtagtggctgtggggacaca
agtgttcagaggactatggaaaggcagggcgagcctgagaacatccaggagatggagtct
ggggctcctgtggagaatggacagcacgacaaacatagcgttgaggttgagattgagtat
gctgaggccacttctgaatgtactcttcagactttgacgggagctgtgagccgccatgag
gcacaagctgtagaggcacaggactccgaacaaagacaggaaaccactacagcagtgaca
agttattctgtggagcccgagtgggccgataacagcaaccagacctgggagtctgagagg
ggcggtacagacgagagaaagacagaggcaggaaaccccagccaacagaccaacggtagc
actgagacaaccagcagcagaagtggagagactgacacaaacagcatgaagcagagcccc
attatggtggagggagagatcaagagcagccattcacacagaccaggttgcgttacagca
aaagaacccagtgagcagcaggtcctggatcagcaagttgaggatacagtggaggtagtg
gcaaccccaccacagccaaggcgggaccaggacagcacccacagccagggccacgagact
gggcaggaatgtgaggaacagccgtccactgacttagccagcagaacagctgaggacaga
gagagtggagagaccatgggacgacaacactgtgatgtcacggtccacacatcctctttt
gaggagggggaactcgtccagtctgtcggctgctccacagacaaactgcctaaggagggg
acagtcacaggacaggaggtccctgggaagaaggtttctgtacagtgggcatcgttcgaa
gaggcagactctctggcatgtagagaggaaatagcagccacagcagtagcagtggtggct
gtagcagtagcagctgctgtagcaagcctagaacaatgcaactcaaactccatgctggag
ggaggccaggtacaggaagctgccgcagagagccagagtaagcatcagactggacgcaaa
gacactgcacgaaggtcaggggtcacggtgtctgaggccactgagaaccttagcacctca
gacaggggtccgactgtctcagcaagtccattagaggaggatgtgatggtcaagaacccc
tcaaagggagcggatgagcctcatgtcagacagggagaggagaacagtgatctgtccaat
accacacatgggagtgagaatggagtggaggcccaactaccaggcctgagtctgacacag
gaagaaagtgtagaagccagcagagagtgtgcagactcccactcgcacacgttattacat
gatgaaagggctgtggacagacagagtgctgaggtcatatcctcctcctcctctatctcc
ccagagagatcctcagagctgacacatcaggaggccatcccagagagcccggccccacca
gccccacctgaacatacacatacacccagtgacttgaccctgaccacccttacacaccca
gacagtggtacatccccgaatccagagctgacttccccattggagctagacaatggaaaa
ggcctgtatgacgagcagtacagctcctctgtggaagtagtcattggcatgtccttgggc
cttcagtattcagacacactggaaagcctggatggtgtgtgtgtgagaacactggatact
aaagaagagcattctgaagatttaagacagcttgacaagccggtgaaagacaaagacata
gtctgtccatcccagggagaagagaaggagaagaaggaatccctctcagacacggcagac
tctacactgatccacaaagagaaggagtcattttaccctgtccagccctgcacagatccc
acactgcaggtgaaaaccacgatcccagaatgcacagaattcccagtatccccatgctca
gagattgttggaggctctgtgtcgaccaccggtgccctgcgggactctgtcagtgatttg
gacagtctgggagaggaaggtgtcttcagaaagggagaagaggctgtgactaggccaagt
gaaagcaacagtggtgtgtcggtgtccttctcctccatagacgacgtggccagtgtgggt
cccctcagcgccagctcccagggcagtgtgggtcctctcagtgtctcctcccagggcaga
gtgggtcccgcttgggcgggggcaggggtgttgagcactagggccagttggagtgccgga
gacgcctggcagacgacagggagggggggagaggaggacgagaggaaagacaagctgaca
gaggtgcctgtgtgctccgctatcctgcgctcctctatccgctcgctctctccattccgc
cggcacagctggggcccggggaagaatcctgcaggagacacagacatgaaccaacgcagt
ttattgcaaggtcaaggggaagggaaacctcgaaagccaacatttcataggagaagtatg
agctggtgtccctccaacgtcccccctccccacctggaacagattgatagcagaagttac
agtttggagggtctggctggagaggaggatgctgggaagatctcctctggtgtgggaact
gttgcgcgtctggacagtgaggagaggggctcgcttctgtccctaacagaggagcaggag
tcagacctgggagactacagcagcctcgacagccagaaatcaggtagagttctgcctgtg
agacacagctgtccctccattcctcaccaagcactcaccaagtcggtgtccatgctggcc
atcagtcacagagacctggacggaatgggatcggcatcgctagagcatagcatctctgag
gaggacccggggccactgcggagcgactctgaggggagacaggggaccaaggtcagccgc
accttcagttacctcaagagcaagatgagtactaagaagaacaaggagaaagagaaggct
caggggaaggataaagaccccaaggaaaaggagaaaaaaaacctgaacggccatctcttc
agctctgtgaacccagccccatcctcaacctgccatcagtgcaacaaacccattatcact
aaagaagccttcctctgcaccaactgcaatgcacaggtccataagggctgcagagagcgt
cttcctgtgtgtgtccaggtcaaaatgaagcagcagaagcagcaaacggtgccagattct
gagtccatatccggagtcgtgttgagaagtaaatctacatcatcgacatcgtctcgggag
cgtccgtggtctgccatcttgtcccctgatgaccaggccatggttacggtggcagcggtg
gtgcctcgcaggaatcacagcatcctcccctttaacaaaagcaacctgtccaagagcatc
tccatcagcaacatcgcagggccattgatggatgagatgccactgaagggcctgaagtac
ctgtcccagtccacagactcactgcacaagacctccaaggtcaatgagtccactgagtct
ctcactgatgaagggactgagatgatggacagccagctgatgggagagtttgaggcagag
tctaaggatcttgaggcagactcctggaccttcactgtggacaagaagtatgtgaagggg
ctcaagaaggaggtggtgaagagacaggacgtcatctatgagctggtccagacagagatg
caccacgtacggacgctgaggatcatgtctgaggtgtatagtaagggcctgcagaaggag
ttgcagctggaggccctcacggtggagcgggtgttccccatgctggacgaactcctggac
ctacacacagacttcttcacccacctcctggagcgcaagagggagtcttcaatcgagggt
cgggatgacgggagcttcctcatccacaagataggggacgtccttgtctcacagttctca
gggcccaatgcggaccgcatgaagaaagtctacgggaaattctgcagtcgccacaacgag
gcggttaacttttataaggagcttcacaccaaagacaaacgcttccaagccttcatcaag
aaaaagatgagcagcacaatcgtccgaagactaggcattccagagtgtatcttattagtg
acacagcgaataaccaagtaccccgtgctactacagaggatactgcatcacaccaaagag
aatgaggaagaccatgacgatataacccaggctctgagactggtgaaggagattctaaat
gcggtggacaacaaggtgaatgaacacgacaagaagaaacggttgaaagaagtgtacagc
cgtacggacagcaagtccattcagaggatgaagagcggccagatgtttgcacgggaagac
ctggtgagaggcaggaggctgctgcatgatggaccactgcagctcaagaactctgcaggc
agactaaaggatgtccaggccatgctgctgtctgacgtgtttgtgttcctccaggagaaa
gaccagaaatatgtctttgcctcactggatcagcggtccacggtgatctccctgcagaag
ctgattgtgcgtgaggtggctaacgaggagaggggtctgttcctgatcacagcggggata
gagaagccagagatggtggaggtgctggccagcaccaaggaggaacgcaacacatggatg
cagctcatacaggacgccatgcactccatagagaaggatgacgatgagggaatccccagt
gagaccgaggaagacaagagactgctagagaccaaagcacgggagattagagagctgctg
aggaagaaggatgagcagatcatgagtctattggaggagaaggtgaaggtgttcagggac
atgtgtgagggaccagcagaggagaccaaacaaacccagtctatcaggaccaaaatgctg
tttagagccaccccagatgacatcaccaagggagagcccatcatgaaggatgccctgagg
gaagtggagactctccatgtgctggtgaatggaagtctgggcggggctgtggggcagcag
gtgtccagtacccaagatgcatcagggggcagtgtggggccagtgtgtctgcctcgccgc
gctgagaccttcggtggctttgacagccaccagatgaacatctccaaaaacggagagaaa
gaagagggggatgactcattagaccttcggaggactgagtcagacggtgtgttaaagaag
gggggcaacaacaacctactgctactgctcaagaggaacagtgagcaggtcctccagagt
gtgacacacctccatgacctcctcagcacactgcaggcagtggtggtgcagcaggacacc
ttcattgaggaccagcgtcatgctctggctgagcggccagcctcgcgccactcctccacc
tcctccctgtcctcctcctcctcgcggcccaactccctgatcgagcaggagaaacagcgc
agcctggagaagcagaggcaggaggtggccaacctgcagcgccagcaggtggcccacgct
gatgagaggaggaggagggagagggagtgggaggtgagggagtcggggctgggcgacagg
gaggtgcaggtgaaggagcaggaggaggagacagtgaagaggcgtaggcagatggaggag
gagaggaaggagcttctaaggaggaaggaagagtatcagagggatctggagaggctgagg
gacgcccagaggaagctggacagagacaaggagacgctgcagcgggaggctgagatggtg
gagcagatgaagaaagccgaggcagagcaggcacacaggacccagcggacgccctccacc
acctcagaggagtccatgaagtttcagagctccacctctctggataaagagcctggagga
ggggaggcagagctgtcttcctcccccgccaccaaagaccccttcctcaggatgggctcc
aagaggaaagggaagaacctgaaccccttctcctcctcgtcctcttcctccaacgccagc
tccaaggcccagagcagcacagagggccagaaccaaatccctaaccgcctgatgcagctg
gccaagaccaaggacaagaaggagaagaagaagaagaaagggaaggggcagcaatcacag
ccagatactggggtcacagagcctcagtgcgacggaaagatcttcttctgctga
DBGET
integrated database retrieval system
