KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112252251
Entry
112252251         CDS       T05605                                 
Name
(RefSeq) thyroid hormone receptor alpha-like
  KO
K05547  thyroid hormone receptor alpha
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    112252251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112252251
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112252251
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    112252251
Nuclear receptors [BR:otw03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   112252251
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 112252251
NCBI-ProteinID: XP_024279096
LinkDB
Position
LG01:47660271..47755730
AA seq 416 aa
MEPISNVEDPNSSEGDVKRWPNGPKRKRKNSTCSLKSMSALSLSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFRK
CIAVGMAMDLVLDDSKRVAKRRLIEENREKRKKDEIVKTLHTRPEPDSSEWELIRHVTEA
HHHTNAQGSHWKQKRKFLPEDIGQSPGAPTPDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLTMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggagcccatttccaacgtcgaggaccccaactcatcagagggagatgtgaaacgctgg
cccaatggaccaaaaaggaagagaaagaacagcacatgttcattgaagagcatgtctgca
ctgagcctctctgtcccaggatacatccccagctacttggagaaggatgagccatgtgtg
gtatgtggagacaaggccaccggctaccattaccgctgcatcacatgcgagggctgcaag
ggtttcttcaggcgaactatccaaaagaaccttcacccggcttactcctgtaagtacgat
ggctgctgcatcatcgacaagatcacaaggaaccagtgccaactgtgtcgcttcaggaag
tgcatcgcagttggcatggctatggacctggtgctggacgactctaagcgggtagccaag
cgtcgtctgattgaggagaaccgggagaagaggaagaaggacgagatcgtgaagactcta
catacacgtccggagcccgacagctcggagtgggagctgatccgccatgtgacagaggcc
caccaccacaccaacgcgcagggctcccactggaaacagaaacgcaagttcctgcctgag
gacataggtcagtcccccggggctcccaccccagatggagacaaggtagacctggaggcc
ttcagcgagttcaccaagatcatcacccccgccatcacacgcgtcgtcgactttgccaaa
aaactaaccatgttctcagagctgccttgtgaggaccagatcatcctattgaaaggttgc
tgtatggagatcatgtcgcttcgtgccgccgtgcgctacgacccagagagtgagacgctt
accctgagcggcgagatggcggtgaagagggagcagctgaagaatggcgggctgggcgtg
gtgtcggacgccatctttgatttgggcaagagtctggcgcagtttaacctggacgactcg
gaggtggcccttctgcaggctgtgctcctcatgagctcagatcgctctggcctgacatcg
gtagataagatcgagaagtgccaggagacatacctgcttgccttcgaacactacatcaac
caccgcaagcacaacattccccacttctggcccaagctgctgatgaaggtgacggacctg
aggatgatcggggcatgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gaactcttccctccgctcttcctggaggtcttcgaggaccaggaagtatga

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