Oncorhynchus tshawytscha (Chinook salmon): 112252292
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Entry
112252292 CDS
T05605
Name
(RefSeq) P3 protein
KO
K14343
solute carrier family 10 (sodium/bile acid cotransporter), member 3/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112252292
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
112252292
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Gene cluster
GFIT
Motif
Pfam:
NTCP5_P3_N
SBF
Motif
Other DBs
NCBI-GeneID:
112252292
NCBI-ProteinID:
XP_024279174
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Position
LG06:24284350..24286835
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AA seq
466 aa
AA seq
DB search
MRTLFAFCCLFLITRGTDPPTEGRSLTDNNNMNVTADSNRRYIQIGDGTSQEFEFPENTK
GVIVISSQYRSAVSTKGRESWKQTVNVSSLDSEVLSILNVSNSHAGPVKSFIISIKSGLP
GRAQLLIQLLELDQDSFPVVIEERTDYCIRVAPGRDDPAAGLIQSGVLSHFSENPVLFAL
LPLIFINKCAFGCKVEVEVLRGLLRKPVPLLLGVAGQFLVMPLYAYGLSRLGSLPKALSL
GLVITCSAPGGGGGYLYSLLLGGDVTLAISMTLVSTVVAAAAMPLCSALYGRLLGVHAAL
HVPFIKILGTLLFIAIPISLGMLVKLRLPKLTRVLLALIRPFSFVLIVGGIFMAYQMGAS
ILANVRPQIVVAGVTVPLFGLLLGFGMGKLAGLAVPQRKTVSIEVGVQNSLLALAVMQLS
FRRAEADFASQAPFIVALSSTSEMLLIVLGHFAHRKFCTPTTRTET
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgctatttgcattctgttgtctcttcttgataacgagaggaacagatccgcca
acggagggcaggtccctgacagacaacaacaacatgaacgtgacggccgacagtaacaga
aggtatatacaaatcggggacgggacctcccaagaatttgagtttcccgaaaacactaag
ggcgtgattgtaatctccagtcaataccgaagcgccgtaagtacgaagggccgcgagagc
tggaagcagacggtcaatgtaagctccttggactcggaggttctttccatcctgaatgta
agtaacagtcatgcggggcccgtgaagagtttcattatcagcataaagtctgggttaccg
ggtcgggcacaactgctcatccagctattggagttggaccaggattctttccctgttgta
attgaagaaaggacagactactgcatcagggtggcgcctggcagggatgacccagctgcc
gggctcatacagtcaggcgtgctgtcccacttttctgagaaccctgtcctatttgccttg
ctgccgctcatcttcatcaacaagtgtgccttcgggtgcaaggtagaggtagaggtgctg
aggggtctcctgcggaagcctgtgcccctcctcttgggtgttgcagggcagttcctggtc
atgccactgtacgcctatggtctgtccaggctgggttccctgccaaaggccctctccctg
ggcctggtcatcacatgctctgccccgggcggcggcggaggctacctctacagcctgcta
ctgggcggggacgtcaccctggccatctccatgaccctggtgtccaccgttgtagctgca
gcagccatgcccctgtgctctgccctgtacggcaggctactgggtgtccacgctgccctc
cacgtgccctttatcaagatcctgggcacccttctcttcattgccatccccatctccctg
ggcatgctggtgaagctacgtctgcccaaactgacccgcgtgcttctggcactgatccgg
cccttcagcttcgtgctcatcgtgggtggcatcttcatggcctaccagatgggggcgtct
atcctggccaacgtgagacctcagatagtggtcgcgggggtgaccgtgcccctgtttggg
ctgctgctagggtttgggatggggaagctggcagggctggcagtgccacagaggaagacg
gtcagtattgaggtgggggtgcagaacagtctcctggcgctggcggttatgcagctgtcg
ttccggcgggcggaggctgactttgcgtcccaagcgcccttcatagtggctctcagcagc
acctctgaaatgctcctcatcgtcctcggtcactttgcccatcgaaagttctgtaccccc
accacccggactgaaacctga
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