Oncorhynchus tshawytscha (Chinook salmon): 112252309
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Entry
112252309 CDS
T05605
Name
(RefSeq) zinc finger protein ZFPM1 isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112252309
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
112252309
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FOG1-like_PR
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-H2C2_2
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
112252309
NCBI-ProteinID:
XP_024279196
UniProt:
A0A8C8J9S5
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All DBs
Position
LG06:24614604..24718280
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AA seq
1237 aa
AA seq
DB search
MSRRKQSKPRQIKRSTGDLEGDEDNTPDDVSLSGDECGASDPEDSAECDSSSPPPYTPLY
IEEPRTHDCLGAPDDEDEEQKGPTHTEEEGEEMEEEEDGLHWRGPDDLELSDDTAGPKVL
ARRDLTTDTLWGPYTGIVQTEETGDDQVPEQISRLTLVCEDDNGWLSRVPLTSDATAANC
TIYSQGEELYCKVTQDISTGDSLLATLSLSSAKQLSSSQTQDVVVKEEPTGVYPASLHSE
IQLLPQQAGMAAILATAVVNKDIFPCKDCGIWYRSERNLQAHLMYYCASRQKQQASSSPP
LDKAKESYPNERVCPFPQCNKSCPSASSLEIHMRTHSGERPFVCLICLSAFTTKANCERH
LKVHTDTQNGVCHGCGFVSTTRDILYSHLVTSHMVCQPGSCSEVYSPGPGLPKLPLSTGL
SPGDSGVVLKCQVCGHITDSPAQLQQHVRTHLEVRVPAERSPTPRQTTPSSADHPEHLDR
EPPACVPHPDSSSPGANGSSATPRGCSPPDQLPTDIRIKEEPHSDSENEGQEEEMEEERV
EKSRGHRGTGSSQTSTSPMSPSAVAVKAEPTSPTPGSSPAHLGGAGSVLPGEDVFLPQYM
FSQEPAILPQASEILAKMSEMVHSRLKQGQIPPGAAPAFYPAGTTTTVQKGATCFECDIN
FNNINNFYVHKRLYCSSRHQQGDVAGPVKEGASGATVPSVGHGSSPQAGSGSRAASASPS
DSDPVPGSTATQGKLVEVKSENPGVKEAVSSSSSEGEGGGGGGRASECSQSPSGSAEDQE
DDPTRTFCQACNIHFSRHENYTVHKRFYCASRHDPSNQRSTAGKATFLPQPIRTRKRKKM
YEIHMARTEALANAAAASLSAPGLSLAVKQEAAASVERVLESPVPALALGLRPATSRSTS
PDRDGPIDLSKRPRLREAPRGSSIPSLPLTDYHKCTACSISFNSIENYLAHKTYYCPATT
LQPHTLETLHRLKRPASISPKSRALERSDVHSEAKGLLTEKAPRGASLSPHLSALPGSGS
EATSPYSVPAAKGPGSPSVVCPYCPPNRAVTCDLVEHFRSMHGLVLSLEGQPAVISPSLS
PRDGTPATPPKLVLRACRDSINGRIRRDTVSPSSPLVNGSPLGHHAGGGSSPKAAPPAVS
PTRSLPLTVSPVPEVLREVGVLNHQVAVTLLPDKASLTLGLPLPVPAPPTPKTLLIPPVQ
NGNTRFCRLCNIKFSSLSTFIAHKKYYCSSHSAEHVK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaagaaagcagagcaaaccccggcagatcaaacgttctactggggacctggaa
ggtgacgaggacaacacacctgatgacgtcagcctatcaggcgatgagtgtggagcctcg
gacccagaggactcagcagaatgtgacagctccagtccaccaccatatacccccctgtac
attgaagagccaaggacacatgactgccttggtgcacctgatgatgaggatgaggaacag
aaaggtccaactcacactgaagaagagggggaggagatggaagaggaggaagacgggcta
cattggagaggtccagatgacctggagctaagtgacgatactgctggccccaaggttctg
gcccgcagagacctcaccactgacacactatggggaccatacactgggatcgtccaaaca
gaagagactggagatgaccaggtgccagagcagatctccaggctgacgctggtgtgtgaa
gacgataacggctggctcagtagagtcccgctaacatccgatgccacagctgccaactgt
accatctacagtcaaggtgaggagctgtattgtaaggtgacccaggacatctccacaggt
gacagtctgttggccacactgtctctctcctccgcgaagcagctgtcctcatctcagacc
caggatgtggtggtgaaggaggagcctacaggtgtctacccagcttctctccactctgag
atacagctcctcccccagcaggctgggatggcagccatcttggccacggcagttgtcaac
aaggacatcttcccgtgcaaggactgtggtatctggtaccgcagtgagaggaacctccag
gcccacctcatgtactactgtgccagccggcagaagcagcaggcctcctcctccccccca
ctggacaaagccaaggagtcctaccccaacgaacgtgtctgtcccttcccacaatgcaac
aagagctgcccgagcgccagctccctggagatccacatgcggacacacagtggtgagcgt
cctttcgtgtgtctgatctgcctgtcagccttcaccactaaagccaactgtgagcgtcac
ctgaaggtacacacggacacgcagaacggagtctgtcacggctgtggcttcgtctccacc
acgagggacattctctacagccacctggtcaccagtcacatggtgtgtcagcccggctca
tgcagtgaagtgtactcccccggccccggcctgcccaaactgcctctgtccacaggtcta
agtcctggagactccggtgttgtgttgaaatgtcaggtatgtggccacatcacagactcg
cctgctcagctccagcagcacgttcgcacacacctggaggtgagggtcccggccgagagg
agccccacaccccgccagaccaccccctcctcggccgaccaccctgagcaccttgacagg
gagccccccgcctgcgtaccccaccctgactcctccagccccggggccaatgggagctca
gccaccccgcgaggctgcagcccacctgaccagctccccacagacatcaggattaaagag
gagccgcattcggactctgagaatgaggggcaggaggaggagatggaggaggagcgggtg
gagaagagccgtggacacagaggtacaggctcctctcagacctccacctcccctatgagt
ccctctgctgtggctgtgaaggcagagccaaccagcccgacccctggctccagccctgcc
cacctgggaggagctggctcagtgctccctggagaagacgtgttcctaccccagtacatg
ttcagccaggaaccagccatcctaccccaggcctcagagatactggctaagatgtctgag
atggtccacagccggctgaagcagggccagatcccccctggggcagcgccagccttctac
cccgctggcactacaaccactgtccagaagggggccacctgcttcgaatgtgacatcaac
ttcaacaacatcaacaacttctatgttcacaagaggctgtactgctccagcaggcaccag
cagggagatgtggctggcccagtgaaggagggggcgtcgggggccacagtcccctcagtt
ggacacggttcatcccctcaggctggatcaggtagtcgggcagcctcagcctcccccagt
gactcagatcctgttccaggcagcaccgccacgcagggcaagctggtggaggtaaagagt
gagaaccctggggtgaaggaggctgtgtcctcctcttcctctgagggggagggtggagga
ggaggaggccgggccagcgagtgcagccagagtcccagcggctcagcagaggaccaggag
gacgaccccaccagaaccttctgtcaggcctgcaacatccactttagtcgccatgagaac
tacacagtccacaaacgcttctactgcgcatcacgccacgatccgtccaaccagcggtca
accgccggcaaagctaccttcctgcctcagcccatccgaacacgcaagaggaagaagatg
tatgagatccacatggctcggactgaggccctggccaacgctgctgctgcctctctctct
gcccctggcctgagcctggctgtgaagcaggaggctgctgcctcagtggagagggtcctg
gagtccccagtcccagccctagctctgggcctgcgtccagccacctcccgtagtaccagc
cctgacagagacggccccattgacctgagcaagaggccccgtctaagggaggccccgcgg
ggcagcagcatcccttctctgcccctcactgactaccacaagtgtaccgcctgcagcatt
agcttcaacagcattgagaactacctggcccacaagacctactactgcccagccaccacc
ctgcagccccacactctggagacgctccacaggctgaagagaccagcatccatctccccc
aagagcagggccctggagcgatcagacgtccactctgaggccaaagggctgctcacagag
aaagctcctcggggggcctcgctcagccctcacctctctgccttacctggctctggctct
gaggctacatcaccttacagtgtccctgcagccaaaggcccaggctctccctctgtggtc
tgcccctactgtcctcccaatagggcggtgacctgtgacctggtggagcacttcagatcc
atgcatggcctggtcctgagcctggagggccagccagccgtcatcagccccagcctgagc
cctagggatgggacccctgccaccccgcccaagctggtcctccgagcctgcagggacagc
atcaatggccggatcagaagggacactgtctccccatcctctcccctggtgaacggtagc
cccctgggacaccatgccgggggtggcagctcccctaaggcagcccctccagctgtgtct
cccaccaggtccctccccctgactgtgtcccctgtgcctgaggtgctgagagaggtgggg
gttctgaatcaccaggttgctgtcaccctgctcccagacaaggcgtcccttacactgggt
ctcccactccctgttccggcccctcctacacccaagaccctcctgatcccccctgtgcag
aacggtaacacccgcttctgccggctgtgcaatatcaagttcagcagcctgtccacgttc
atagcccacaaaaagtactactgttcctcccacagcgctgagcacgtcaagtga
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