Oncorhynchus tshawytscha (Chinook salmon): 112252327
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Entry
112252327 CDS
T05605
Symbol
wdfy4
Name
(RefSeq) WD repeat- and FYVE domain-containing protein 4
KO
K24777
WD repeat and FYVE domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252327 (wdfy4)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112252327 (wdfy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
WD40
PH_BEACH
NBCH_WD40
DUF4704
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
112252327
NCBI-ProteinID:
XP_024279225
LinkDB
All DBs
Position
LG01:complement(48625342..48804197)
Genome browser
AA seq
3245 aa
AA seq
DB search
MLQQMETHTHKDSMNTSGQKHTHLSPDHTHTKKETMDQSEIDTPLPLDQKEEHLRRVLPL
YIQVCESGGGTEELDLRSLAVLTANTVVSNIHAILAEKPAEEARYEVQQFFQRRDETDNT
DDIDNSEIDSRETDRTEETDRGESHSQTTQTDNAGWLLLKTLSFLTATNSAELMSVVKPG
LPAALVKCLYLLVCLPSRKESAAVEETFQELLIQVLLQLCCHPSSVEEMVETEELQCLII
SLTSLHDQTSAPWRHQASRVLRAVSAAKTPNTVPFLQAKNCVRICIQNLQRISDRAPAPV
LAEVAVTVFSFIRDSYQLNPALFTELENNDGYIVLQAIMTRCEEGVPAEEFGPVEDLLSL
LASLCLFGRSELKVALCVTNPQPPGFKFDPSLTTGSAVRNLSAFRLLQGSFQRSEDCVFC
SQILSTIRTVWSWNRANFFLLEWTVQSLAQLAQCVSKKPPPVHRLFFSMLEMVAFHLNYI
PHEAVRAVQAVLKQGWAGAGAGGAQFGVAALGCFHRLTVRSGLLAEVLSDGGLLELLLGE
LRRRAKILRKARGAGPQDQSAVEDNERALTTSMLTVVAALTLRSIRNTVSVRDLGMVPYI
KIFLDEEQYRGPTLSILEQLSEINPDEFMSTAIGALCSSTQQELGLKQDLLQSVLKVLER
PNSWGAFRHARGFTGLLSLVVDMEGALSDPTQGGVWGAKGQQGILDLLFLTLHTLALAVH
VHPVNSHQFQAEGFYERLAEALLRLGCFQTEGWEATERMEGHTGGMMSRGLGQRWGQRET
EDNHSLGRSFHQFLELSETPVLTSLSSTSKPPLPPPLQTCIRLLSYLDQLATGTYAALEM
TAGHVGEKREEGGDGETQGGGGGGERLQTVPPTRKTSQTPEDELPGGSRPAGHSVAVVCS
ETNYRFTCDQTILYPGALRVIMTLLPHVFTAEDPQLSVEVQYSVAHHLQVMVTSEKNRQI
VCKGGLVSTLLTHCRSILLRPDHPLYLPDTRILEKISSHSISHIDLRRFLCLCDPLMCQA
NKIAATSAPESNTQCPFSPSNGHSPEKADSLTDSETTTRSIMKRSFSLLSSSPPIGSPVG
QPLPLHQIISLVSMTSPRSFRPHRVSTSPAFVEFDMTESGYGCLFLPSLATVKGVNADSI
PTGGIGGDCRGFPPAAGLSYSCWFLISKFSSACDSHPIWLLSVVRHMSRAEQQYVCLSVS
ISASDGCLVISTEEEPFTFLDMMEPEVRTPSPLPGSLRFKCSSQLTPGQWHHLAIVMAKD
VKKSCKVTAHLNGELVGAAKMLYIQPFPGQYISMEPTAVIDVCAFIGTPSIWKQHASLVW
RVGPTYLFEEVLSPGAVGVIYNQGTAYLGNYLALRNTGSGPDLLPFRLVPEERISFGINP
AVATLTTVAKIRESYNEVDCRLIAKEMGITSRDNSTPVFLSQNISHHLTGTARTIGAALV
GHFGVRTFAPSIAGDSFLYLGGPAVILSMVAMAADDGALYAAVKVLLSVLETSPAMEREM
TRINGYKLLAFLLKIKSSVLSSRTFQLVLSLSGSVDHLGSGAACLHNRPAFNALLCNLEV
WKNTAESLDLSVLNHFAEILTSSSGDHGNAKVMHNLGLVPKLLFLLADPMVTPRKVKVAT
CIITCLLRGHFTSTDIRRLGLFLVYTVPPPSVSESSGLSDTLDEETKAQSFSPARLVWVR
NQLLSSLCDLISSDSLLTADEQKELIQTLGSDWFLLFLQPRLHSSTLCLGLRLLTLLLAN
QSERNSFREGVFPGTLVESLDEPSVVIDNLRAYEWSYECQSVTCAGFDVLQRLLVRQAHL
PQVYGALAALLLGKRGGETPDGQLDLDEVLQAVIDSTEYTNSAPLQLCSKSAAMLLELVK
AIITQGSSAADASWELQFPGSVMQFLCLVHNHRPRDPLWTSPEFLHTLASTVFPPESEEE
VCQPTRKQVCDFIRILLMDSLLNVPAKEHTHPLLLLLEYSPEGASLERRQVFQTELLEFF
MEIIHMTSQENGHNTHLTTQESNSQSPEGQMATLMENMVLFSQTFLEKLYSGMFLVEPEN
LLTFLADQIVVVMEKGLSQKENTVSSLYTSTNRALLYFLSRPQHTQAEQDAVIRTLQVVM
ARWDVVMATYNANVNFITCLLHCLLLIRSGSYPEGFGFESHKKHQRRILSHLFPLKTSHT
TTFSQVPDSDTELMSQVESVWSKILTERRTILEDTYKIELSANQTQRMGPVSMSDISPLW
EETALKVWQLYTGNVKRKLTSTIQRKDSVISSAIRSVHKRLGRETGTVEEFLSCMEAHLK
RGQEMFEKLRKNHTQLCVYEWERLGTMWLCVEEELLRERGVFGPGPGVVLTRGWVQDAAE
GPNRTRPRIRRRAQRHSKRLADMCVRNGLPEESKGRTETDSESRILFEPGTEEEEDGGED
CNRLTFFPVLTETTAPLTEPFAPASTTPEPCSHTHTCSHTHTILQELEPEEEVKAKVCVV
VVSGLSVTEGLLLFGTDSLYMCEGFTLSPAGDVCCRKHHPTGVRDAFVSSMLTKDISSSS
PSCKRWPYQDIRDVRFMRFLLEENALEIFMQNGHSTFLVFFNKDHVSAFKRLCSVVPALI
GRGVAEVITNARKTPVMEKTTQVKWQRGDISNFEYLMHLNTLAGRTYSDLMQYPVFPWVL
ADYKSETLDLTKPATFRDLSKPMGAQTEKRRDMFIQRFNEVENSEGDLAVRCHYCTHYSS
AIIVSSFLVRMEPFSHTFLTLQGGYDIAERMFHSVKKDWDSASRDNMSDVRELIPEFYYL
PDFLVNTNNFKLGCMQDGTTLGDVVLPPWAKGDPREFIRVHREALESEYVSSHLHLWIDL
IFGHCQQGPAAVESLNTFHPYFYAQRRKGTRGQDALRDPLIKSTIQGYVNNFGQVPKQLF
NKPHPPRAGSKKEGSAPAQPTPFFFRLDKLKPSIQPFKELLRGPVGQVVCVDKEVLVVEK
NRLLIPPLWNVYFSWGFPDNSCSFGHYTTEKTFAVCESMCDWGKMLCAACPNQATIVTAG
ISSVVCVWDVSISKDKLTHMKLRQALYGHTDAVTCLAVSEVHGVIASGSRDLTCILWDLE
ELNYITQLPGHKASITALAINDLTGEIASCAGPVLYLWSMKGQLLTWLDTSCGSDVTSCS
SDGDILSVCFTQRHEWDPRNVIVTGCADGIVRIWRTEYTRTSPDPPQQPTSPGQDQSAIT
IDGMSGPSQSWERHLVLCRPLNRSEAVSRRRYKNNPAVTALAMSRTHATLLVGDGWGRVF
TWTCE
NT seq
9738 nt
NT seq
+upstream
nt +downstream
nt
atgctccaacagatggagacacacacacacaaggatagtatgaacacctctggccagaaa
cacacacacctctcccctgaccacacacataccaaaaaggaaaccatggaccagagcgag
atagacacacccctccccctcgaccaaaaagaggaacacttgcgccgagtcctgcctctc
tacatacaggtatgtgaaagtggtggtgggacagaggagctggatctgaggagtctagct
gttctgactgcaaacactgtggtctccaacatccatgccatactggcagaaaaacctgca
gaggaggctcgctacgaggtgcagcagttcttccagagaagagacgagacggacaacaca
gacgatatagacaacagtgagatagacagcagggagacagacaggacagaggagacagac
aggggagagtcacacagccagacaacacagacagacaatgcaggatggcttctgttgaag
actctgtctttcctgactgctacaaactctgctgaattgatgtctgtagtaaagccaggt
ctgccggcggccctggtgaagtgtctctacctgctagtgtgtctaccgtcccggaaggag
agtgcagcagtagaggagacctttcaagaactgctcatacaggtcctgttacagctgtgc
tgtcacccttccagtgtggaggagatggtggagactgaggagttgcagtgtctgatcatc
tcgctcacatcactacacgaccagactagtgccccctggaggcaccaggcatcacgtgtt
ctcagagctgtctctgctgctaagacacccaataccgtccccttcctacaggctaagaac
tgtgtgcgtatctgtattcagaacctgcagcgtatcagtgatcgtgccccagctccagtc
ttagctgaggtggctgtcacagtgttcagcttcatcagagactcctaccagctcaaccct
gctctgttcaccgagcttgaaaataacgatggatacattgtcttacaggccatcatgacc
cggtgtgaggagggtgtgcctgcggaggagtttggtccagtagaggacctgttatctctg
ctagcgtctttgtgtctgtttgggaggtcagagctgaaggtggcgctctgtgtcaccaac
cctcagccacctggcttcaagtttgacccctcactcaccacaggctctgcggtaaggaac
ctatcagcgttccgtttgctccagggttccttccagcggtcagaggactgtgttttctgc
agccagatcctaagcaccatcaggactgtgtggtcatggaacagggccaacttcttcctg
ttagagtggactgttcaatcactggctcagctagctcagtgtgtttcgaagaaaccacct
cctgtacacagactgttcttctctatgttagagatggtggcattccatcttaattacatc
ccccacgaggctgtgcgtgcggtgcaggcggtgctgaagcagggctgggcaggggccggg
gccggaggggcacagtttggagtggctgccctcggctgcttccacaggttgacagtgcgt
agtggtctgctagcggaggttctcagtgatggaggtctgttggaacttctgcttggagaa
ttacgcaggagggccaagatactcaggaaggctagaggagcaggtccccaagatcagtca
gctgtagaggacaatgagagagctctcaccaccagcatgctcacagtagtggctgccctc
accctacgctccatcagaaacacagtgtcagtccgtgaccttgggatggttccctacata
aagatatttctagatgaggagcagtacagaggaccaaccctcagcatcctggagcagctg
tcagagataaaccctgacgagtttatgtctacggctataggagctctctgttcctctaca
caacaggagctggggctcaaacaagacctgctgcagtcagttttgaaggttctggagaga
cctaacagttggggggcgtttcgacatgcgcggggcttcaccggcctgctgtccctggtg
gtggacatggagggggctctgagtgaccccactcagggtggggtgtggggtgctaagggg
cagcaggggatactagacctcctcttcctcaccctacacaccctcgccctagctgtccac
gtacaccctgtcaactcacaccagttccaggctgaagggttctacgagaggctggctgaa
gccttactacggctgggttgtttccagactgagggctgggaggcaacagagaggatggag
ggccacactgggggtatgatgagtaggggcctgggccagagatggggtcagagagaaaca
gaggacaatcattcacttgggaggagcttccaccagtttctggagctgtctgagacccca
gtgctcacctccctctcttccacctccaagccacccctgcctccccctttacagacctgt
atcaggctcctctcctacctggaccaattagctacagggacctacgctgcccttgagatg
acagcaggacatgtgggagagaagagagaggaggggggagatggagagacccaggggggt
ggtggtggaggagagaggctgcagactgtgccaccaacccgaaagacttcacagacacca
gaggatgaactaccggggggatccagacctgcaggccacagcgtcgctgttgtctgctct
gagactaactacaggtttacctgtgaccagaccatactgtatcctggagccctcagggtc
atcatgactctcctgcctcatgtctttactgcagaggatccacagctgtcagtggaggtc
cagtactcagtagcccaccacctccaggtgatggtaacatcagagaagaaccggcagatt
gtctgcaaggggggtttggtgtccactctactaacccactgtcgaagcattctgctcagg
ccggaccacccactatacctgcctgacacacgcatcctagagaaaatctcctcacactcc
atctcccacatagacctcaggcgtttcctgtgtctttgtgatcctctgatgtgccaagct
aacaaaattgctgccacctctgctccagaatccaacacacaatgccccttttctccctcc
aatggccacagcccagagaaggcagacagcttaacagatagtgagaccaccactcgctcc
atcatgaagcgctcttttagcctgctgagctcctctcctcctattggctctcctgtcggc
cagcccctccccctgcaccaaatcattagcctagtctctatgacgtcaccaagaagcttc
cgaccacaccgagtctccacctctccggcctttgtggagtttgatatgactgagagtggc
tatggatgtctatttctaccatccctggctacagtgaaaggtgtcaatgctgactccatc
ccaacaggggggataggaggagactgtcgtggtttccctccggcagcaggcctgtcatat
tcctgctggttcctgatcagcaagttcagttcagcctgtgattcccacccgatctggctg
ctgtctgtggtgcgccatatgtcccgtgccgaacagcagtatgtctgtctgtctgtctcc
atctcagccagcgatggatgtttggtcatctcaactgaggaggagcctttcaccttcctg
gatatgatggagccagaggtgcggacccccagcccactgccaggttctctgaggttcaaa
tgctccagtcagctgaccccaggtcagtggcaccatctggccattgtcatggcgaaggac
gtgaagaagagctgtaaggtcacggcccacctcaatggggaactggtgggagcagcaaag
atgctgtacatccaaccgttcccgggtcagtacatttccatggaacccacggcggtgatt
gacgtgtgtgcattcattggaacgccgtctatatggaaacagcacgcttcgttggtgtgg
cgcgtcgggcccacctacctgtttgaggaagtgctgagtccaggggctgtaggagtcatc
tacaaccagggaacagcctacttgggaaactacctggctctacgcaacacaggctctggc
ccagacctcctccctttcaggctggtccctgaggagaggatctcatttggcatcaacccg
gctgtagcaactttaaccacggtagcaaagatacgagaaagctacaacgaggtggactgc
cgtctcatcgccaaagagatgggaatcacgtccagggataactccacccctgtgttcctg
tctcaaaacatcagccaccacctaactggcactgcacgcaccataggagctgcactggtt
ggacactttggagtgcggacgttcgctcccagcatcgcaggggatagctttctgtacctt
ggtgggccagcggtgatcctaagcatggttgctatggcggcagacgatggagcgctgtac
gcagcagtgaaagttctgctgtctgtgttggagacaagccctgccatggagcgggagatg
acacgcatcaacggctacaagctcctagcattcctgctgaagattaagagcagtgtgttg
agcagtagaacctttcagctggtgctgtctctgtctggttcagtggaccacctgggatct
ggagccgcttgtctacacaacagacccgccttcaatgctctgctctgtaacctggaggtg
tggaagaacactgcggaaagtctggacctgtcagttctcaatcactttgctgaaatcctg
acatcatcaagtggggaccatggtaatgcaaaggtcatgcataacctgggtctggtgcct
aaactgctcttcctattggctgaccccatggtgacccccaggaaagtaaaggttgccacc
tgtatcatcacttgcctgcttagaggacacttcacctccaccgacatacgcagacttggc
ctcttcctggtgtacaccgtgcctcccccaagtgtgagtgaaagctctggactctctgac
actcttgatgaggaaaccaaagctcaaagtttcagtccagccagactagtgtgggtccgt
aatcaactgctgtcttctctctgtgacctcatcagctcagacagtcttctcactgcagat
gagcagaaagagctgatccagacactgggcagtgattggttcctgctgttcctgcagccc
cgcctccactcttccaccctgtgcctagggctccgcctactcacactcctcctggccaat
cagagcgagcggaacagcttcagagagggcgtgttcccaggcaccctagtagagagcctg
gatgaaccctctgttgtcatagacaacctgagagcttatgagtggtcctatgagtgtcag
agtgtcacctgcgcaggcttcgacgtgctgcaaaggcttctggtccgccaggctcacctg
cctcaggtgtacggagcgctggccgctctactgctggggaagagaggaggagaaacacct
gacggacagctggatctggatgaagttctgcaggcagtgattgacagcacagagtacaca
aactctgctcccttacagctgtgttccaagtctgcagccatgctactggagctggtcaag
gccatcatcacacaggggtcatctgccgctgatgcatcttgggagttgcagtttcccggc
agtgtgatgcagttcctctgtctggtacacaatcaccgcccccgagacccactatggaca
tctccagagtttctacacacgctcgccagcactgtgtttccccctgagagtgaagaggag
gtgtgtcagccaaccaggaagcaggtgtgtgacttcatccgtatcctcttaatggacagc
ctgctcaacgtgcctgccaaagaacacacacaccccctactgctgctactggagtattcc
ccagaaggagcatcgttggagcggagacaggtcttccaaactgaattgcttgagttcttc
atggaaatcatccacatgaccagccaggagaatggacataacacacacctcaccacacag
gagtcaaactcccagagtcctgaggggcagatggccacactgatggagaacatggtgctt
ttcagtcagacgtttctggagaaactctacagcggcatgtttctggttgagccagagaac
ctgctcaccttcctagcagaccagatcgtggtggtgatggagaagggcctatcacagaaa
gagaacacagtttcctccctctacaccagcaccaaccgagctctgctctacttcctttcc
cgcccacaacacacacaggccgaacaggatgctgtcatcaggacgctgcaggtggtcatg
gcgcgctgggacgtagtcatggcaacctacaatgccaacgtgaactttattacctgcctg
ctgcactgtctactgttgatacgatctggcagctacccagaaggctttgggtttgaaagt
cacaagaaacaccagcggagaatcctgtctcatctgttccctcttaagaccagccacact
accacattcagccaagtacctgattcagacacagagctgatgtcccaagtagagtctgtg
tggtctaagatccttactgagagacgcaccattctagaagacacctataagattgagctc
tcagctaatcagacacagaggatgggacctgtcagcatgagtgacatcagccctttgtgg
gaagagacagcactcaaggtgtggcagttatacacaggcaatgtgaagaggaagctgact
agcaccatccagaggaaagatagtgtaatcagctctgctattcgctctgtccacaaacga
ctggggagagaaactggcactgtggaggagttcctgtcttgtatggaggcccatttgaag
agaggtcaggagatgtttgagaagctgaggaagaaccacacacagctgtgtgtttatgag
tgggagcggttggggactatgtggctgtgtgtggaggaggagctgctaagggagaggggt
gtgttcggcccggggccgggggtggtgctgacacgaggctgggtccaggatgcagctgaa
ggccccaaccgcaccaggcctcgcatccgcaggagagcccagcgacactccaaacggttg
gcagatatgtgtgtgagaaatggtctgccagaggagagcaaaggaaggacagagaccgac
tcagagtcaaggatcctctttgagccagggacagaggaagaggaggatggtggagaggac
tgtaaccgcctaacctttttccctgtcctgactgagactactgcacctctcactgagccc
ttcgccccagcgtccaccacccctgagccctgctcacatacacacacctgcagccacaca
cacaccatactacaggagctggagcctgaggaagaggttaaagcgaaggtatgtgtggtg
gtggtcagtgggctgtctgtaacagaggggctgctgttgtttgggacagacagtctgtac
atgtgtgagggcttcaccctaagccccgcaggagacgtctgctgcagaaaacaccacccc
actggtgtgcgtgacgcattcgtttccagtatgctgactaaagacatatcttcatccagc
cccagctgcaaacgatggccctaccaggacataagagatgtccgctttatgcgtttcctt
ctagaggaaaatgcgctggagatctttatgcagaacggacactctactttcctggtattc
ttcaacaaagaccatgtgtctgcttttaaaaggctgtgttcagtggtgccagcattgata
ggtagaggggttgctgaggtcataactaatgccaggaagactccagtgatggagaagact
actcaggtgaaatggcagcgtggggacattagtaattttgagtacctgatgcatttgaac
actctggctggtagaacctatagtgacctcatgcagtaccccgtcttcccctgggtccta
gcagactacaagtcggagaccctggatctgaccaaaccggcgacatttcgtgacctctcg
aaaccaatgggagcccagacagagaagaggagagacatgtttattcagagatttaatgaa
gtggaaaatagtgaaggtgacctggcagtgaggtgtcactactgtacccactattcttcg
gccatcatcgtgtcttccttcctcgttcggatggaacccttctcacacacctttctgacc
ctacagggagggtatgacatagcagagagaatgttccatagtgtgaagaaggactgggac
tccgcctccagagacaacatgagcgatgtcagagagctgatcccagagttctactaccta
cctgacttcctggttaacacaaacaacttcaaactaggctgtatgcaggacggtaccact
ctaggggacgttgtcctccctccctgggctaagggagacccccgggagttcatcagagtt
caccgagaggctctggagagtgagtatgttagctcccacctccacctgtggatcgacctg
atctttgggcactgccagcagggaccagccgctgtagagtccctcaacacattccacccc
tacttctacgcccagagaaggaaagggacaagggggcaggatgcactcagagaccccctt
atcaagagtaccatccagggatacgtcaataactttggacaggttcccaaacagctgttc
aacaagccccaccctcctcgtgccggctcaaaaaaggagggatcagcacccgcccagcca
accccctttttcttcagactggacaagctcaaaccctccattcaaccattcaaagagctc
cttcgtggtccagtaggccaggtggtttgtgtggacaaagaggttttggtcgtagagaag
aacagactactgatccctcctctgtggaatgtctacttctcctggggcttccctgataac
tcctgctccttcggacactacactactgagaaaacctttgctgtatgtgagagtatgtgt
gactgggggaagatgctgtgtgcagcgtgtcccaaccaagctaccatagtcactgctggg
atcagctcagtggtgtgtgtgtgggatgtttccatcagcaaggacaaactcactcacatg
aaactcagacaggcgctgtatggtcataccgatgcagtaacgtgtctggcggtgtctgag
gttcatggagtgatagccagcggttcgcgtgacctcacctgtatactgtgggaccttgag
gaactcaactacatcactcagctaccaggacacaaggctagcatcacagcacttgctatc
aatgacctcacgggtgagatagcatcgtgtgcagggccggtcctgtacctatggagtatg
aagggtcagttactcacctggctcgacacatcctgtggctctgatgtcacttcctgcagc
tcagatggggacatcctgtctgtctgcttcactcagagacacgagtgggatccacgaaac
gttatagtcactggctgtgctgacgggatagtgaggatctggaggacggagtacactaga
acatcacctgatcctccacagcagcccacatccccaggacaggatcagtctgcaattacc
atagacggaatgtcgggtccgagtcagagctgggagagacacctggtgttgtgtcggcca
ctaaacaggagtgaagcagtgtccagacggcgctacaaaaacaaccctgcagtcactgct
ctagccatgtccaggacgcatgctactctgctggttggagatggctggggtagagtcttc
acctggacctgtgagtga
DBGET
integrated database retrieval system
