Oncorhynchus tshawytscha (Chinook salmon): 112252342
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Entry
112252342 CDS
T05605
Name
(RefSeq) phagosome assembly factor 1 isoform X1
KO
K27411
phagosome assembly factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252342
Membrane trafficking [BR:
otw04131
]
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Other autophagy associated proteins
Others
112252342
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
112252342
NCBI-ProteinID:
XP_024279243
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All DBs
Position
LG06:complement(27097902..27107859)
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AA seq
425 aa
AA seq
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MLDLEVVPERSLGHEQWEFALGMPLAQAISILQKHCRIIKNVQVLYSEQMPLSHDLILNL
TQDGMKLLFDACNQRLKVIEVYDLSKVKLKYCGVHFNTQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEPNFAHGLASLQIPHGATVKRMYIYTGNNLQ
DTKAPVMPLACFLGNVYAECVDVLKNGAGPLGLRLRILTAGCGPGVMADAKVRAVERNIY
FGDSCQDVLSALGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDST
THLVKKFVLHTNFPGHYNFNIYHRCDFKIPLVIKKEAADAQWEDCILTTYSKWDQIQELL
GHPMEKPVVLHRSSSANNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGAPRPSSRVRP
EASAH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaagttgttcctgaaagatctttaggacatgagcaatgggaattcgca
ttagggatgccattggcccaggccatttccattttacagaaacactgccgcatcatcaag
aatgtccaggttctctacagtgaacaaatgccactcagtcatgacctcatactcaacttg
actcaggatggaatgaaactgctgtttgatgcctgtaaccagagactgaaggtgattgaa
gtatacgacttgagcaaagtgaaattgaaatactgtggagtacatttcaacactcaggct
atagcacccactatagagcagattgaccagtcctttggtgccacacaccctggagtatac
aatgctgcagagcaactgtttcacttgaactttcggggactctccttctccttccagctt
gactcatggaatgaagctcccaagtatgagcctaactttgcccatggcttggcctccctg
cagattccgcacggggccacagtgaaacggatgtacatatatactgggaacaacctacag
gacaccaaggctccagtgatgccccttgcctgtttccttggcaacgtgtatgcagagtgt
gtggacgtgctgaagaatggtgcgggaccacttggtctgagacttcgcatcctcactgca
ggctgcgggccgggggtgatggctgatgccaaggtgcgtgctgtggagaggaacatctac
tttggagactcctgtcaagatgtgctgagcgctctgggctcgccacacaaggtcttctac
aagtcagaggacaagatgaagatccactctccgtcgcctcacaagcaggtcccgtccaaa
tgcaatgactacttcttcaactacttcaccctgggggtggacatactctttgattccacc
acacacctggtgaagaagtttgtccttcataccaacttccctggtcattacaatttcaac
atatatcatcgatgcgatttcaagattccacttgtcattaagaaagaagctgctgatgct
cagtgggaggactgcattctcactacctacagcaagtgggatcagattcaggagcttctt
ggacaccccatggagaagcctgtcgtgctccacaggtcatcctcggcaaataataccaat
cccttcggctctacgttctgttttggactacagcgaatgatctttgaggtgatgcagaac
aaccacatagcttcagtgactctgtacggtgcccccagacccagcagccgggtccgaccc
gaggccagcgcccactga
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