Oncorhynchus tshawytscha (Chinook salmon): 112252357
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Entry
112252357 CDS
T05605
Name
(RefSeq) partitioning defective 6 homolog alpha
KO
K06093
partitioning defective protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112252357
09144 Cellular community - eukaryotes
04530 Tight junction
112252357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112252357
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112252357
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PB1
PDZ_6
L51_S25_CI-B8
Motif
Other DBs
NCBI-GeneID:
112252357
NCBI-ProteinID:
XP_024279270
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Position
LG06:27782962..27820211
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AA seq
405 aa
AA seq
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MVQSTGVQRANMSRHQRTPLKNTNNVVEVKSKFEAEYRRFALKKSGTGGFQEFYRLLQTV
HRIPSVEVLLGYADIYGDLLPINNDDNFYKALSSANPLLRIIIQKRDVDEPVVFATNSLQ
RRKKGLAGLRPAQQKTKPGLMIGHPQDFRQISSIIDVDILPETHRRVRLHKHGTHKPLGF
YIRDGVSVRVTPQGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVNGIDVDSKSLDQV
TDMMVANSHNLIVTVKPANQRNNVVLRGSKVSVGGNSSSGSIGSTISHDLAPSPASQSVS
HYSNSNSVAEGDSDEDGDLIIESDILPYLPHHCVSNGNGSHREFPLSSSLGQRPLPQSIF
LPSSGSLSDSKASLNSLTTPTHNGSPTKTSSSQESMREDGNIITM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggttcaatccaccggggttcaacgcgcaaacatgtcaaggcatcagaggaccccattg
aaaaacacgaacaatgtggtcgaggtcaaaagcaaatttgaggcggagtacagacgtttc
gctctgaagaagagcggcaccggtggctttcaggagttctaccgactgctgcagaccgtt
caccgcatccccagtgtggaggtgctgctgggatatgcggacatctatggtgacctgctg
ccaattaacaacgatgacaacttctacaaggccctgtcctcagccaatccactactcagg
atcatcatccagaagagagatgtggatgagcctgtggtctttgccaccaactccctgcag
aggaggaaaaagggtctggcagggttgcgcccggcacagcagaaaaccaaaccaggactg
atgattggccatccccaggacttccggcagatctcctccatcatcgatgtcgacatcctg
cccgagacacaccggcgcgtccgtctgcacaagcacggcacccacaagcccctgggtttc
tatatccgggacggggtgagtgtgcgggtcacgcctcagggagtggagaaggtgcctggt
gtctttatctcccggctggtacgtggaggcctggctgagagcacaggcctgctgggggtt
aacgatgagatcctggaggtcaacggcattgacgtggacagcaagtctttggaccaggtg
acagacatgatggtggccaacagccacaacctgatcgtgacggtgaagccagccaaccag
cgcaataacgtggttcttcgaggaagcaaggtctcggtaggggggaacagctcctctgga
tccataggctccaccatctcccatgacttggcccccagccccgcctctcaaagtgtcagt
cactatagcaacagtaacagtgtggcggagggcgacagcgacgaggatggagaccttatc
attgagagtgacatactgccatacctgccccaccactgtgtgtccaatggtaatggcagc
cacagggagtttccattgtcctcgtcactggggcaacggcccctcccccagagcattttc
ctgcccagcagtggttctctgtcagacagcaaggcctctctgaactccctgaccactcct
actcacaacggcagccccaccaagaccagcagcagccaggagagcatgagagaggatggg
aacatcatcacaatgtaa
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