Oncorhynchus tshawytscha (Chinook salmon): 112252387
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Entry
112252387 CDS
T05605
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112252387 (chd2)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112252387 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
112252387
NCBI-ProteinID:
XP_024279323
LinkDB
All DBs
Position
LG06:complement(29849493..29884034)
Genome browser
AA seq
1821 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNHSGLESGSQSESEQGRERRRLHHSGESNSSS
ESGSQSGSESESQQASAEVKDRQPVKKKDNLSDVKKMWEEHPDVYGVRRSNRSRQEPARL
NIGAGGSSDSEGESPKRKAPRQKKKENTWKSDESDDDDDDDEEDASSADSEQEEKKVRSR
RLPARRPKNKSSTVKKQQPPKGRKTRKQESSVEEDDDDDDDDDDDDEDTPKRQTRRRVSA
KVSYKEDQNDFETDSDDLIEMDGAEVEPEDDSETIEKIMDTRTGKKGACGASTTQYAVEE
NGDPGADFDPEKDEGEIHYLIKWKGWSYIHNTWESIESLTQQKVKGLKKLDNFKKKNDEL
SAWLSKASPEDSEYYNCQQELTTDLNKQFHILERVIATKTGKTQGLSDFPSHSHKNGASS
NEPEYLCKWMGLPYSECSWEDGALLGKKFQHCIDGFTNRNSSKTVPSKDCKVSEVLKQRP
RFVALKNQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSY
MFHQHQLYGPSLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEWVCHQTK
RIKFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSNHRLLIT
GTPLQNSLKELWSLLHFLMPDKFENWEDFESEHGKGTDNGYQSLHKVLEPFLLRRVKKDV
EKSLPAKVEQILRVDMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELKKCTNHG
FLIKQPEEECDTPQEHLQALVRGSGKLVLLDKLLTRLRDRGNRVLIFSQMVRMLDILAEY
LALKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFD
SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTT
GRTVLDNNSGNSNSNPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILRLAETRE
SDQGSSATDELLSQFKVANFSNMEESAPEMVERMVPDWDDIIPEDQRRRLEEEQKQKEME
DIYMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSGDDKKPKRRGRPRARKNN
VEGFTDAEIRRFIKAYKKFGAPLERLEGIARDSELVDKSQADLKRLGELIHSSCVTAVQE
HEEHLRENPSEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPANPTERNQFQ
LTCRVKVPHFDVDWDLQDDTQLLLGVYEHGYGNWDLMKTDPDLKLADKILPDDPEKKPQG
KQLQARSDYLLKMLKKEADCKDVTKEEAKVKKRKPRVKKENKAPKDEQGNDISSPRMSDN
PSEEGEVRDDGTEKTPTKKRQKKKDNKENKEKHGTPKKEKDADKDKKRPKPKKEKAKGAK
GKKPQGPVHITAGSDPVPIGEEDDELDQENFSICKERMRPVKKALKQLDKPDEGLSVQEQ
LQHTRTCLLKIGDRITECLKAYSDPDHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKK
RSREEEKEHRKKGDDPSGRKKTFRAEASGSSRDSTGTQPSSKSHPGMPHPSPTSPHGPHR
EGYNQSNKRHFGNDDRGDWQRDRKYNYPGNSNQPWQSERHHPYDAHRYKDHHYGDRRPRE
DSYRSSSSSYRSGGSSSSPRKRPYDQYDSDREHRDRRAYYDRHPDSKRRRGDDFRPPQDF
RGSGGHPQDFRVRMPEHRGPPGPAGPEHFTRPYPDIKPPPLLDPRSPQAQKSPQDSRSPT
AERTAEQKAAAADLNWNNRKT
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaagaagatgaaggttcgactcaaagcaatgcatca
agcaattcggcctcagaagaatcgaaccactctgggttggagtctgggagtcagtcggag
agtgagcagggcagggagaggagaagattgcaccactcaggagagtccaacagctcttct
gaatctgggagccagtccgggtctgagagtgaatcccagcaggcctcggcagaggtcaag
gacagacaaccagttaaaaagaaagacaatctgtcagatgtgaagaagatgtgggaagag
catccagatgtctatggggtcaggcgatcaaatcgcagtagacaagaacctgctcgtctc
aatattggagctgggggtagcagtgactccgaaggtgaaagtcctaaaagaaaagcacca
cgacagaagaagaaagaaaatacctggaaaagtgatgaatcggatgatgatgatgatgat
gatgaggaggatgccagcagtgcagacagtgagcaggaagagaaaaaagttagatccaga
cgacttcctgctagaagaccaaagaacaaatcatctacagtcaaaaaacagcagcctcca
aagggaaggaaaaccaggaaacaagagtcatctgtggaggaagatgatgacgacgatgat
gatgatgatgatgatgacgaagataccccaaagagacaaacccggcgaagggtgtctgct
aaagtcagttacaaggaggaccaaaatgactttgagactgactctgacgacctgatagag
atggatggagctgaggtggagccggaagatgacagcgagaccattgagaagatcatggat
accaggacaggcaaaaaaggagcctgcggggcttccactacccagtatgctgttgaggaa
aatggggacccaggagccgactttgacccagagaaggatgagggagagatccattacctg
atcaagtggaaaggctggtcctacatccacaacacctgggagagcattgagtccctcact
caacagaaggtcaagggactcaagaaactagataacttcaagaagaagaacgatgagctc
agtgcttggttgagcaaagcatcccctgaggattcagaatattacaactgccagcaagag
ctaaccactgatttaaataagcagttccatattctggagagagtcattgcgactaaaacc
gggaagacacagggtctctcggattttccttctcacagccacaagaatggtgcttcttcc
aatgagccagagtacctgtgtaagtggatgggcctgccttattcagagtgcagctgggag
gatggagctctgctggggaagaagttccagcactgtatagacggcttcaccaacaggaac
tccagtaaaacagtcccctccaaagactgcaaagtgagtgaggtgttgaaacagaggccc
agatttgttgcactaaagaaccagccatcgtacattggggatgagaacctgcagctgaga
gattaccagttagatggactgaactggctggctcactcctggtgcaggtgcaatagtgtg
atcctggctgatgagatgggtctggggaaaaccatccagaccatctcgttcttgtcctac
atgttccaccagcaccagctgtatgggccctccctggtggtggtacccctatccaccctc
acctcctggcagagagagtttgacacctgggcccccgatatgaacgtggtggtctacttg
ggagacgtgatgagcaggaaatcgatccgtgactatgagtgggtatgccatcagacaaag
agaataaagttcaatgcacttataaccacgtatgaaattctactgaaagacaagggggtg
ttggggaacataaactgggctttcttgggtgtggatgaagctcacaggctaaagaatgac
gactccctgttgtacaaaaccctgatcgagttccggtccaaccacagacttcttatcaca
gggacaccactgcagaactctctcaaagagctgtggtcccttctgcacttccttatgcct
gacaagtttgaaaattgggaagattttgaaagtgagcatggtaaagggactgacaatggc
taccagagccttcacaaagtccttgagcccttcctcctgaggcgtgtaaagaaggatgtg
gagaaatccctgcctgccaaggtagaacagatcctccgtgtggacatgtctgctgtgcag
aagcagtactacaagtggattctgaccaggaacttcagagccctgcagaaaggcacccgc
ggcagctcctctggcttcctcaacatcgtcatggagctgaagaagtgcactaaccatggt
ttcctcatcaaacagcctgaggaagagtgtgacactccacaggagcacctgcaggcgttg
gtgaggggcagtgggaagctggttcttctggacaagctactgaccagacttcgggacagg
ggtaacagagtcctcatcttctcccagatggtgcgcatgttggacatcctggctgagtac
ctggccctgaagcgctacccattccagcgcctggatggctccataaagggagaaatacga
aaacaagcacttgaccactttaatgctgaaggttctgaggacttctgtttcctgctgtcc
acaagagctggaggtttgggtatcaaccttgcctctgcagacactgtggtcatctttgac
tctgactggaaccctcagaacgacctgcaggctcaggccagggctcacaggattggccag
aagaagcaggtgaatatctatcgcttggtcacaaagggatctgtggaggaggacattatt
gagagggccaagaagaagatggttttggaccatcttgtaattcagagaatggacaccact
ggtcgaactgtattggataacaactccggaaattcaaactccaacccattcaataaagat
gagttgactgccattctgaagtttggagctgaagatctgttcaaagaggcagaaggagag
gagactgaacctacggagatggatattgatgagatcttgcggttggctgaaaccagagaa
agtgaccagggatcaagtgccacagatgagcttctctctcagttcaaggtggccaacttc
tccaacatggaggagagtgctccagagatggtggagcggatggtgcctgactgggacgac
atcatcccggaggaccagcggcggaggctggaggaggagcagaagcagaaggagatggag
gacatctacatgctgcctagaagcaggagctccaataagagggcccaagccaacgacagt
gacagtgacgttggctccaagctgaagcaccgctcctcgggctccgagagcgagacggac
gacagcggcgatgacaagaagccaaagaggagaggcaggcccagagcccgcaagaacaac
gtggagggttttactgatgcagagatccgcaggttcatcaaggcttataagaaatttgga
gctccgcttgaaaggctggagggcattgcccgggactcagagctggtggacaaatcccag
gcagacctgaagagactgggcgagctgatccatagcagctgtgtgacggctgtccaagag
catgaagagcacctcagagagaatcccagtgaagccaaaggccctgggaagcgcagaggt
attaacatcaagatctcaggagtgcaggtcaatgccaagtccatcattcagcacgaggag
gagtttgagccactgcacaaagctgtgccagctaatcctactgagagaaaccaattccaa
ctgacctgcagagtgaaggtgcctcactttgacgtggactgggatctgcaggatgacact
caactgttgctgggggtctatgagcatggctacggaaactgggatctgatgaagaccgac
cccgatctcaaactcgcagacaagattctcccagatgacccagagaagaaacctcaaggg
aagcagttgcaggccagatcagactaccttctgaagatgctgaagaaagaagcggactgt
aaagatgttactaaggaggaggccaaagtgaagaagaggaagcctcgggtgaagaaagag
aacaaggcccctaaagatgaacagggcaatgacatctcctccccccgcatgtcagacaac
ccctcagaggaaggggaggtgagggatgacgggactgaaaaaactcccacaaagaagagg
cagaagaaaaaggataacaaagagaacaaagaaaaacacggaactcctaaaaaagagaag
gacgcggacaaagacaaaaaacgtccgaagccaaaaaaagaaaaggcaaaaggagctaaa
gggaagaagccccaggggccggtccacattactgctgggagtgaccctgttcccatcgga
gaggaggacgatgagctggaccaagagaacttcagcatatgtaaggagcgcatgaggccg
gtgaagaaggccctaaaacagctggataagcctgacgagggcctgtctgttcaggagcag
ctccaacacacacgcacctgcctgctaaagataggagaccgcatcactgagtgccttaaa
gcctacagcgacccagatcatgtcaaaacatggcgtcggaacctctggatttttgtgtct
aagttcacagaatttggagcgaggaagcttcacaagctgtacaagatggctcagaagaag
cggtctcgggaggaggagaaggagcatagaaaaaagggggatgacccgtcaggcaggaaa
aagactttccgagcagaggcgtctggttccagtcgagactccaccggcacccagccatcg
tccaagtctcatccaggcatgccccacccctctccaacgtccccccatggtccccacaga
gaaggctacaaccagtccaacaagcgacactttggaaatgatgatcgaggagattggcag
cgagatcgtaaatacaactaccctggaaatagcaaccagccctggcaaagcgagcggcat
catccatatgacgcccatcggtataaggaccatcactatggtgaccgtcgtccacgtgaa
gactcctaccgcagcagctctagtagttaccgtagtggcggcagcagcagctcccctcgg
aagaggccgtatgaccagtatgacagcgaccgagaacacagggaccgtcgtgcctattac
gacagacatccagactcaaagcggagacgcggcgatgacttccgtcctccccaagacttc
agggggagtggaggccatccccaagacttcagggtgaggatgccagagcatagggggccc
ccggggccagcagggccagaacacttcacccggccctatccagacatcaaaccccccccc
ctgctggacccacgctccccacaggcgcagaagtccccccaggactcgcgctcgccaact
gcagagcggactgcagagcagaaagcagctgcggctgatttaaactggaacaacaggaag
acatga
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integrated database retrieval system
