Oncorhynchus tshawytscha (Chinook salmon): 112252411
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Entry
112252411 CDS
T05605
Name
(RefSeq) mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1
KO
K07369
mucosa-associated lymphoid tissue lymphoma translocation protein 1 [EC:3.4.22.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112252411
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112252411
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C14: caspase family
112252411
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MALT1_Ig
Peptidase_C14
Ig_3
Ig_2
I-set
ig
V-set
Ig_VEGFR-1-like_5th
Ig_4
Ig_5
C2-set_2
GABP-alpha
Motif
Other DBs
NCBI-GeneID:
112252411
NCBI-ProteinID:
XP_024279373
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All DBs
Position
LG06:31184123..31203072
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AA seq
645 aa
AA seq
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MCMVFGRSSDIVIVQHPVSVYVPLNYKVTLSVRAEGTGILNYQWFKSSKEEVFGGTRADL
IVTAQRSQLYICRVNDQFCNCMFSKWVTVKVLDIAKPGLPVAWRGEPHIAVHPAPQTVRQ
GERLTLSCTAFGIPTPHYQWYRNGLPLLGKTTDTLQIENAESDHRGTYLCYVSNVQEERW
TEAADVEIVPSNQLTATDKVALLIGNLNYSHHPDLMAPTMDVHELANLLQQLGFRVVSLL
DLTREEMLAAIDKFLLLLDRGVYALFYYAGHGYERLGRNYLVAIDAPQPYRSENCVCVQR
VMCKMQERRTALNVVLLDTCRTWYNLDCIASEIRPLVPMGNTVYGYATCENAEAYEVQDG
GKSTGIFTKYLNKHILQLEKVTHILELVSESQCSYLGRDPFVIGKQAVEIRHTLKEPRSL
TDPIRTTGHTGELHLRDACRRQANELPHQKLLIFNCGVEVEVSFSALFSNVMVAFGRVKT
TGPRAQDCTITLRSTPAMEDIFSSPGRSGEMDSLLLNNLVAENPDCSLRLCGLQKLQGSL
VIKVDLHYTHMDRKLWLQESKQLDIGKPLVASCDLHRGQQAMVSQRRDGAPAQSMGHSRI
SHSKQRPRQTLGQPGRPFTKSAECAAKVPTARSNEPGENDETEPH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatggtgtttggtcgcagttcagacatcgtcattgtgcagcatcctgtttctgtg
tatgtaccactgaactataaggtgactctgagtgtgagagcagagggaaccggtatcctg
aactaccagtggttcaagtctagtaaagaggaggtatttggtgggaccagagcagatctg
attgtcacagcccagaggtctcagctctacatttgtcgcgtgaatgaccagttctgcaac
tgtatgttcagtaaatgggtcacagtaaaggtcctggacattgctaaaccaggtctccca
gtagcatggcgaggggagccccatatcgctgtacaccctgcaccccagactgtcagacaa
ggggagagactcaccctcagctgcaccgcctttggcattcccacccctcactaccagtgg
tacagaaatggacttcctctgttgggcaagaccacggacacactgcagatagagaatgca
gagtcagaccatagaggaacatatctctgctatgtatccaatgttcaagaggagagatgg
acagaggcagctgatgttgaaatagtgccatctaatcaactcacagcgactgacaaagtg
gccctgcttattggtaacctcaactactcccaccatccggacctgatggcccccactatg
gatgtccatgagctggccaacctgctgcagcagctgggcttcagagtggtgtctctactg
gatctcaccagggaggagatgctggcggctattgacaagttccttctcctgcttgacagg
ggcgtgtatgccctgttctactatgctggtcatgggtacgaacgtttagggagaaactat
ctggtggccatagatgctccacaaccataccgttcagagaactgtgtctgtgtacagagg
gtcatgtgcaagatgcaggagagacggactgcattgaatgtggtcttactagacacctgc
agaacatggtacaacctagattgcatagcttctgaaatcaggcccttggtaccaatggga
aacaccgtgtatggatatgccacatgtgaaaatgcagaggcttatgaggtacaggacgga
gggaagagcaccggaatcttcactaaatatctgaacaagcacatcctacagctagagaaa
gtcacccacatcctggagctggtgtctgagagtcagtgttcttatctgggcagagaccct
ttcgtcataggcaagcaggcggtggaaatcagacacacactaaaggagccccgctccctc
acagatccgatcaggaccaccggccacactggagaactacatctgagagacgcctgccgg
agacaggccaacgagctaccacatcagaagttgcttattttcaactgtggagttgaggtg
gaggtcagcttctcagccttgttctccaacgtcatggttgcttttggcagagtgaaaacc
actggacccagagcccaggactgcactatcactctgaggagcacacctgcaatggaggat
atattctctagtcctgggaggtcaggtgaaatggactctctgttgctaaataacttggtt
gctgaaaaccctgactgtagcctcagactttgtggccttcaaaagcttcagggatcctta
gtgataaaggtggacctacactatacccacatggacaggaagctgtggctacaagagagc
aaacagctggacatagggaagcctcttgtggcatcctgtgatctgcacaggggacagcaa
gcaatggtttcccagagacgagatggtgcccctgcccagagtatgggacacagccgcatc
tcacacagtaagcagcgcccacgtcagacattgggccagccaggccgccccttcactaag
agtgcagagtgtgctgccaaagtccccactgcaaggagcaatgaaccaggggagaatgat
gagactgagccccattga
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