Oncorhynchus tshawytscha (Chinook salmon): 112252545
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Entry
112252545 CDS
T05605
Name
(RefSeq) class E basic helix-loop-helix protein 41
KO
K03730
class B basic helix-loop-helix protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112252545
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112252545
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Utp13
Oscp1
Motif
Other DBs
NCBI-GeneID:
112252545
NCBI-ProteinID:
XP_024279619
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Position
LG06:complement(40147837..40150540)
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AA seq
433 aa
AA seq
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MDERIPRLQDRQFTDHEHFLGLEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQKIIALQNGDRSM
KTSVHADLDAFHSGFQACAKEVLQYLNKFENWNTREQRCAQLINHLHKVSAQFQPSAPLL
HSQQPAGDVLERDGQKAEIQAGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKTDGNKGC
DRSKAVKIKQEFGDERAAKKTKMNWAGNGTTGADTTTRPDLAFMNSLMGITGVGQQTPFC
MPFYFINPSAAATYMPLFDKSNLEKFVYPAAAAAALSAPFPWLYPGLNSHASATAAAAAG
AFSGMSTEKSSGFGSNSKHSLSDDSDMSNVEPGSPEEREDNPENDVDYDDDDVDDDDDDD
DDDDGIRERLPRQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaataccgcgtctgcaagacagacaatttactgatcatgaacatttttta
gggttggaatactcctcactctacatgtgtaaatctaaaagaggactgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgattgatagagaagaagaggagagacagaatc
aatgaatgtatcggacagctgaaggatttgttacccgaacatctcaaattgacgacgctc
gggcatttggagaaagcggttgttctcgagttaactttgaagcatttaaacgctttgact
gcagtcactgagcaacaacaccagaagattattgctttgcagaatggggatcgatcgatg
aagacgtccgttcacgctgatttggatgcgttccactccgggttccaagcatgtgccaaa
gaggtcctgcagtacctcaacaagttcgagaactggaatacgcgcgagcagcggtgcgcg
cagctcatcaaccacttgcacaaagtatctgcgcaatttcagcccagtgcgccactgctc
cattcccagcaacctgccggagacgtgctggagcgcgatggccagaaagctgaaatccaa
gccggacatgaccgcgtatcggtcatacagaggagccacggggagcttaacgagaatgac
acagacacagacagtggatacgggggtgaggcggaaaagaccgatgggaataaaggatgt
gaccgtagcaaagcagtgaagataaagcaggagttcggggatgaacgcgcagccaaaaaa
acgaagatgaactgggctggaaacggtacgacgggcgcagacacgaccaccagacctgat
ctggcctttatgaactctttgatgggaataactggcgtgggacagcagactccattttgc
atgcctttttacttcatcaatccctctgcagcagcgacctacatgccgctattcgacaaa
agtaacctagagaagtttgtgtaccctgctgcggcagcagcagctctctcagccccgttt
ccatggttataccccggccttaactcacacgcttcggcaactgcagcggctgccgcaggt
gctttctccggcatgtcgacagagaagagctctggattcggttccaactccaagcactct
ctctctgacgacagtgacatgtcaaacgtggagcctggctcacctgaggagagggaggac
aaccctgagaatgatgttgattatgatgatgatgatgttgatgatgatgatgatgatgat
gatgatgatgatggtattagggaacgactccccagacaatga
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