Oncorhynchus tshawytscha (Chinook salmon): 112252547
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Entry
112252547 CDS
T05605
Name
(RefSeq) myopalladin isoform X1
KO
K22028
myopalladin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112252547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112252547
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112252547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
112252547
NCBI-ProteinID:
XP_024279624
LinkDB
All DBs
Position
LG01:50097511..50143873
Genome browser
AA seq
1922 aa
AA seq
DB search
MQEDNVNQHTSLSQLLRENYLAEARARHSGMSRSDSSRHLVYAPLKGKAEDSAGQDKPQP
QFPDLSAFLSQEELDKSVNLACQAIGHKACEERTEFKAPVTPSVTSTASNTPDTQPDLEL
KEPLPTHVTFFPERRSFSPLSIPNNVIRIDKQIYQPSQLSIQDNAIRTDRQKYPLSQPSI
QDNDTRTDRELYPPSIQDNDTRTDRELYPPSIQDNGMRTDRQTFPPSIIQDITMNNWVAR
EAFEDFKRSGARGINTPEYGLGTQSKKEFLNKAADFIEELSSLFKANSSKRIWPRSCKTH
RSRANKGQVDGSVYSLNADNRERTILLQDFETEMEMERPTNPFSIQPSEVQGLGMDPGFG
HAYFPMQDRRTTEEQYDEAESPALVEITPGVYTADPICEPPHFIQKLKSREVLEGSKVQL
DCIVRGLPMPEVRWFCEGKELENCPDIQIINNRELHSLTIAEAFEEDTGRYSCFASNFYG
TGSTSAEIYVEGASSTDSEGEQHSELAQLQRTRAQPGAQSLPPVVSVVSLCVDDATICTE
EQPQEATSLPSSQVVTASVPVQVATNVLPVTEVTTAPSTQVAFTLVPAQEMSAQLLVQEV
STLDLPPVDTVSVLSLPTPSRVPVTSTPLPTQTVSTTALPLTQVVSSTLPAQVAAVQTTL
AENLNGDSYTLSPDIYPQGLDGRPIIAAPVFTKSLQDLLASESELVVLECRVKGVPSPKV
DWYREGTVIEDSPDFRILQKKPRSMDESEEICTLVIAEVFPEDSGKFTCTASNKYGTVSS
IAALRVKGNENTNNNHVKTLVGTLTMESTQVPEPSSSDLTLPRLKPQAEALVTNSIKPHS
STIRLDPFSSSNLRLEPLSTSTLRLDPLNSSMLRQVPISPNMPSLDPLSLGSSLRIGTRS
SNTYHLDPLYLSTPHPDLPTSSSGLCQDPQSSGEMPKTDQGDSRAFSVLPDPPVGLWPKV
AGTPIHKPEPPPHVNLPDPPNSSCLKPGVLVNHNGPRSSSRAGLRVHFKLPEDETENQSE
ASNSHSYEDMSQLANKEPPPVLAKPKLDPVQLQLLHNQVLMEQQQTETEPNGATKSQPEA
SAWPAQTHHESQAQTQAQPQSNLPRSSTPMLLQTTHAAPILTTAPTPFLNSAPVTSLNTT
PTPQLNTSPPAHLLNIASAPLLNPYTTHSYSTSSPLLNTSPVPPKNTTSATLLNTAPPAP
VMGTLLSLPQLKTAPSCKSSPPSASLLRTVPAPHLYTSPASPPYMTQQNTTHSSQLNLTH
SSLPKAIHVPKFSTPPTPHLNTAPTASLSSIPVDFKKAPTTMQNTSPTPLLRTTHASLLN
LAPTSQSFNYSRPKEFITAQTPLSPFRSPSPTESPVPLLHKLAAELNSSNPNQFSPQPRV
LPTRVLKSPTSPPSFMSSPNSPTMLPAAYLNSVFALPQQSPPQAASPTSSTSSPIQNHVA
FLSSVLPSLHTTQATNSMGLPRSAHRPLQGILKKLPTSTRPILDDDIRSSQQTLLHDIEK
KLRFNEGLMRGHVQQKPSTYEGKTASRHLGSNIPATVFNYDEEYKVSNFEQRLMSEIEFR
LERTPVEESDDEVQHDEIPTGKCIAPMFGKKLKNFRAMEGVPMTFSCKVVGIPVPKVYWF
KDGKQILRKNYHYKKIREGDGTCALHIEVTNNDDDGNYTVLAANPQGRISCSGHLIIQTG
PLRNRMTPMIHSQRVRARIQEVEEGEPTQERFFQPHFLQAPGDMVAHEGRVCRLDCKVSG
LPNPELMWLINGRPIYPNFYHRMLVRENGIHSLVIDPLKQDDAGTYTCIASNKAGQSSFS
LELRVVEKEMKQVPQFVEKLQNTGIAEGTPVRLECRVLGMPPPVIYWKKDNDTIPHTKAR
VSLHQDATGYVFLLIQPTRKEDAGWYTVSAKNKAGIVSCTARLDIYAQWHQHVPLPMKKA
PW
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggacaatgtgaaccagcatacatcattgtctcagctcttgagagagaactac
ttggccgaagcgagggcgagacacagcggcatgagccgttccgactcctcgcggcacctg
gtctacgcgcccctcaaaggcaaggcggaggactccgcggggcaggacaagccccaaccc
cagttcccagacctctcagccttcctgagccaggaagaactggataagagtgtcaacctg
gcctgtcaggctatcggacacaaggcctgcgaggagaggacagagttcaaggccccggtc
accccttctgtcacctccactgcatccaacactcccgacacccagcctgacctggaatta
aaagaacccctaccaacacatgtgacattcttcccagagagacggtcattctcacctctg
tccataccaaacaatgtgataaggatagacaaacagatatatcagccatcccaactgtcc
attcaggacaacgcaataaggaccgacagacagaaatatccactgtcccaaccatccatc
caggacaacgacacgaggacagacagagagttgtacccaccgtccatccaggacaacgac
acgaggacagacagagagttgtacccaccgtccatccaggacaatggaatgaggacagac
agacagacgttcccaccgtccattatccaggacattacaatgaacaactgggtggccagg
gaggcctttgaggactttaagaggtcaggggctagggggataaacactccagagtacggc
ctggggacccagtccaagaaggagttcctcaacaaggcagcagacttcatcgaggagctc
tcctctctgttcaaggctaacagctccaaaaggatatggcccagatcatgcaaaactcat
aggagcagagccaacaagggtcaagtggatgggagtgtttactccctgaatgcagacaac
agggaacgaaccattcttctccaagacttcgaaacggaaatggagatggagaggcctact
aatcctttcagtattcagccatcagaagtccagggtttgggcatggatccagggtttggg
catgcttacttccccatgcaggaccggaggactactgaggagcagtatgatgaggctgaa
agccctgccctggtggagatcacccccggggtgtacacagccgaccccatctgtgagccc
cctcacttcatccaaaaactgaaaagcagggaggtgctggagggcagcaaggtacagctg
gactgtattgttcgaggactccccatgcccgaagtccggtggttttgtgaggggaaggag
ctggagaactgccctgacattcagatcatcaacaaccgcgagttgcactctctgaccatt
gctgaggcattcgaggaagacacagggcggtactcttgctttgcatccaacttctacggc
acaggctctacatccgccgaaatctacgtcgaaggtgcctcctctacagattcggagggg
gaacaacattctgaacttgcacaactacagaggacccgagctcagccgggtgcccaatct
ttacctccagtggtcagtgttgtgtctctgtgtgtggatgacgcaaccatctgcactgaa
gaacagccacaggaggccacctcactgccttctagccaggtagtcactgcatctgtacct
gtccaggtagctactaatgtccttcctgttacggaggtgacaacagcaccatccacccag
gtggcgtttacattggtccctgcccaggagatgtcagcacagttacttgtccaggaagtt
tctactctagatctaccgcctgtggacacggtgtcagttctgtcactgccaacaccgtca
cgtgtcccagtgacgtccacaccattaccgacacagacagtctctaccacggcactaccg
ctgacccaggtggtctcctctacactgcctgcccaggttgctgcggtacagacgactcta
gccgagaacctaaatggagacagctatactctaagtccagacatctatcctcaaggtcta
gacgggaggcctatcattgctgcccctgttttcacaaagagtctgcaggacctgttggca
tcggagagcgagctggtggtgctagagtgccgtgttaaaggagtcccctcccccaaggtg
gactggtacagagaaggaactgtcatagaggactcccctgacttcaggatcctgcagaag
aagcctcgatccatggatgaatcagaggaaatatgcactttggtcattgctgaagtcttc
cctgaagattctggaaaattcacttgcactgcaagcaacaaatatggaactgtatccagt
atcgctgcactaagggtgaaaggaaatgaaaacaccaacaacaaccacgtgaaaactctc
gtaggcactttaacaatggagtccacacaagttccagagccttcttcatcagatctcact
ctgcccagactaaagcctcaagctgaggctcttgtcaccaacagcatcaagcctcactcc
agcaccatccgcctggatcccttcagctccagcaatttacgactggaacctctgagcacc
agtaccctccgtctagaccctctgaactccagcatgctgcgccaggtgcctatcagcccc
aacatgcccagcctggatccactaagcctgggcagcagcctccgtataggcacccgtagc
tccaacacatatcatctggacccactctacctgagcacacctcacccagacctgcctact
agctccagtgggctatgccaggatccccagagcagtggtgagatgcccaagactgaccag
ggagactccagagccttttcagtgttacctgaccctcccgttggtctttggcctaaggtg
gcagggactcctatccataaacctgagccccctccccatgtaaacctccctgatcccccc
aactcctcctgccttaagcctggggttctggttaaccacaacgggcccaggtccagctcc
agagcaggcctccgtgtgcactttaaactgcctgaggatgaaacggaaaaccagagtgaa
gcatccaatagccattcatatgaagatatgtcgcagttggccaataaggaaccacctcca
gtactagccaagcccaaactagaccctgtccagctgcagcttctgcacaaccaggtgctt
atggagcagcagcagactgagactgagccaaacggagccaccaagagccaaccggaggca
tctgcctggccagcccagacacaccacgagtcccaggcacagacccaagcccagcctcag
tcaaacctgccccgttcatctacccccatgctcctgcagaccacccacgccgcacccata
ctgaccacagccccaacaccctttctcaactctgcccctgtgacaagcttgaacactacc
cctacaccccagctaaacactagtccccctgcccacctgctaaacattgcatctgcacca
ctactgaacccatacaccacccattcctattctacttcttcacccctgctaaacacaagc
cctgtaccaccaaagaacactacctctgcaacgctactgaacacagcccctcctgcacca
gttatgggtaccctgctgtcccttcctcaattgaagacagctccttcttgtaagagctcc
cctccatctgcctctctgctgagaactgttcctgcaccacacctgtacaccagccctgca
tccccaccctatatgacccagcaaaacaccacccattcttcccagctgaatttaacccac
tcctccctgcctaaagccattcacgtacccaagtttagcacacctcccacacctcatctg
aatacagcccccacagcgtctctcagctccatccctgtagatttcaaaaaggcccccaca
accatgcagaacacctcccccactcccctgctcagaacaacccacgcctccctcctcaac
ctggctcctacgtcacagagcttcaactactctaggccaaaggagttcatcactgcccag
actcccctctctccatttaggagtccctctcctacagagtcccccgttccattgctccac
aagctggctgccgagctcaactcctccaaccccaaccagttctctccgcaacccagagtc
ttacccaccagagtcctcaagtcacccaccagccccccttccttcatgtcctcccccaac
tccccaaccatgttgcctgctgcctacctaaactctgtgttcgccctgccacagcagtcg
cccccgcaggcagcgtccccgacctccagtacctccagccccatccagaaccatgtggcc
ttcctcagctctgtcctgccctctctacacaccacacaagccaccaactctatgggcctg
cccaggagtgctcataggccacttcaaggcatactgaagaagttgcctacaagcactcgt
cctattttagatgatgatattcgtagcagccaacaaactctcctccacgatattgagaaa
aagcttaggttcaatgaaggtttaatgcgtggtcatgtacaacagaagccgtctacttat
gaggggaaaacagcgagcagacacctcggatcaaacattcccgccactgtctttaactat
gacgaggagtacaaagtgtccaactttgagcagagactgatgagtgagatagagttccgt
ctggagcgcacgccagtcgaggagtcagatgacgaggtacaacacgatgagatcccaaca
gggaagtgcatcgctcccatgtttggcaaaaaactgaagaacttcagggccatggagggt
gtgcctatgacgttctcctgtaaagtggtggggatccctgtacctaaggtttactggttc
aaggatggcaagcagatcttgagaaaaaattatcattataagaagatacgagagggggac
ggaacctgtgccctacacatagaggtcaccaataacgacgatgatggcaactacactgtc
ctggcagctaacccccagggacgaatcagctgctctggtcatttgatcatccaaacaggt
cctctccgaaaccgaatgacacctatgattcactctcagagggtgcgggcccgcatacag
gaagtggaagagggtgaaccaacccaggaacgcttcttccaacctcacttcctccaggct
ccaggggacatggtggctcatgagggcagagtctgtagattagactgcaaggttagtggc
cttccaaacccagagctgatgtggctgatcaacgggaggcccatctacccaaacttctac
caccggatgctggtgagggagaatggaatccattcccttgtcatagaccctctaaaacag
gacgacgctgggacatacacttgcattgccagcaacaaagcaggacagagctccttcagt
ctagagttaagagttgtggaaaaagagatgaagcaggtcccccagtttgtggagaagctc
cagaacacaggcatcgcagagggcacccccgtccgactggagtgcagggtgctgggcatg
cctccacctgtcatctactggaagaaagacaatgacaccattcctcacaccaaggccaga
gtcagcttacaccaggatgccactggatatgttttcctcctgattcagccaaccaggaaa
gaggatgctggctggtacaccgtatcagcaaagaataaggctggaattgtttcatgcaca
gcgagactagacatctatgcccagtggcatcaacatgttcctctgcctatgaagaaggct
ccgtggtaa
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