Oncorhynchus tshawytscha (Chinook salmon): 112252555
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Entry
112252555 CDS
T05605
Symbol
srgap1a
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252555 (srgap1a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112252555 (srgap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112252555 (srgap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_9
SH3_2
DUF3631
Motif
Other DBs
NCBI-GeneID:
112252555
NCBI-ProteinID:
XP_024279634
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All DBs
Position
LG06:41696144..41860794
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AA seq
1113 aa
AA seq
DB search
MSNTKFKKDKEIIADYETQVKEIRAQLVEQQKSLDQQTEMRVQLLQDLQDFFRKKSEIEM
EYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDIY
LNNVIMRFMQISEDSTRLLKKSKEITFQLQEDLMKVLNELYTVMKTYHMYHTESISAESK
LKEAEKQEEKQIGRAEPVFSIRLEDKHQRRSSVKKIEKMKEKRQAKYSENKLKSIKARNE
YLLTLEATNSSIFKYYIHDLSDLIDCCDLGYHASLNRALRTYLSAEYNLETSRHEGLDII
ENAVDSLDPRSDRQRFMELYPTAFCPPMKFEFQPHMGDEVCQIAMQPPVNGELMLRFQQL
QSRLATLNIENEEIKKTSEATLTTIQDMVTIEDYDVSECFHHSRSTESVKSTVSETYLSK
PSIAKRRANQQETEQFYFMKFREFLEGSNLISKLQAKHDLLKRTLGEGHRGDYMTTRPPN
VPPKPHGGTNRRARPRSVFNVKLFNGNLESFVKDSGQAIPRVVESCIRFINLYGLQHQGI
FRVSGSQMEINDIKNSFERGNDPLTDDENNHDINSVAGVLKLYFRGLEKSLLPKERFNDL
LSCIRIENLYERSLYIRKILLTAVPRSVLIVMRYLFSFLNHLSQYSDENMMDPYNLAICF
GPTLMPTPNIEDQVSCQAHVNEVIKTVIIHHETIFPDAKELDGPVYEKCMAGGDYCESPY
SEHGAIEEVDNEGGTETHTSEDESEPIEAIAKFDYVGRSARELSFKKGASLLLYQRASDD
WWEGRHNGIDGLVPHQYIVVQDMDDNFSDTLSQKADSEASSGHGAEDKDMCSGKDMGSPT
DTKIPDAYIGRHRKRTEPPSRRPPVRPSDVHCIVHSQQSHGGQVHTPEMGSPVLGHSFSP
RDLLRSRNHGQLPMDSPERRRRTGHGSLTNISRHESLKKMESPPIRRSTSSGQYTAVFQE
PHPHPHGGGGKPLDPETIAQDIEETMNTALNELRELERQSSAKHAPDVVLDTLEQRQSTG
GPTPASSSESLSPLHNILLRAQTGEAGGAPMRRSTSSSSDTMSTFKPVVVPRMGVQLKPP
ALRPKPLVLPKTGPTHLPAAPPPQDPLDKSCTM
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatacaaagttcaaaaaggataaagaaatcattgctgattacgagactcaagtt
aaagagatccgtgcccagctggtggagcagcagaaatccctggaccagcagaccgagatg
agggtgcagctcctccaggacctgcaggacttcttcaggaagaagtcggagatcgagatg
gagtactccaggaacctggagaaactggctgaacgcttcatggcgaagacgcggagcacc
aaggaccaccagcagtacaagaaggaccagaacctgctgtcaccggtcaactgctggtac
ctgctgctgaaccaggtgaggagggagagcaaggaccacgccaccctcagtgacatctac
ctgaacaacgtcatcatgcgcttcatgcagatcagcgaggactccacacgcttgctcaaa
aagagtaaggagataacgtttcagctccaagaagacttgatgaaggtcctcaacgagctc
tacactgtgatgaagacctaccacatgtaccacacggagagcatcagcgccgaaagcaag
ctgaaagaggcggagaagcaggaggagaaacagatcggccgggccgagccggtcttcagt
atccgtctggaggacaagcaccagagacgcagctccgtcaagaagatcgagaagatgaaa
gagaagcgccaggccaagtactctgagaataagctgaagtcaatcaaagcgcgaaacgag
tacctgctgacgctggaggcgacaaattcctccatcttcaagtactacatccacgacttg
tctgacttaattgattgctgtgatctgggctaccacgccagcctgaaccgggccctgagg
acctacctgtcagcggagtacaacctggagactagtcgccacgagggcctggacatcatc
gagaacgccgtggacagcctggacccccgcagcgaccgccagcgcttcatggagttgtac
cccactgctttctgcccgcccatgaagtttgagttccagccccacatgggcgacgaggtg
tgtcagattgcgatgcagcccccggtgaatggcgagctaatgctgaggttccagcagctc
cagtcccgcctggccactctgaacattgagaacgaggagatcaagaagacgtcagaggcc
accctgaccaccatccaggatatggtgaccatcgaagactatgacgtgtccgagtgtttc
caccacagccgctccacagagtcggtcaagtccaccgtgtcggagacctacctcagcaag
cccagcatcgccaagcggagggccaaccagcaggagacggagcagttctacttcatgaaa
ttccgggagtttctggagggcagcaatctcatctccaaactgcaggccaagcacgacctg
ctgaagaggactctgggagaaggtcacagaggggactatatgaccacaaggcctcccaat
gtgccgccaaaacctcacggtggcacgaataggagggctaggccccgctcggtctttaac
gtcaagttgtttaatggcaatctggagtcctttgtcaaggactctggacaagctatcccc
cgcgtggtcgagagctgtattcgattcatcaatctgtatggccttcaacatcaagggata
ttccgtgtgtccgggtctcagatggaaatcaatgacataaagaactcattcgagagaggt
aacgacccgttgacagatgacgagaacaaccacgacatcaactcagtggccggtgttctc
aaactctacttccggggcctggaaaagtccctcctgcccaaggaaagatttaacgacctc
ctctcctgtatcagaatagagaacctgtatgaaagatccctgtacatccgtaagatcctc
ctgaccgccgtgcccaggtctgtcctcatcgtgatgcgctacctcttctcctttctcaac
cacctgtcccagtacagtgatgagaacatgatggacccctataacctggcaatctgcttc
ggccccaccctcatgcccacgcccaacatcgaggaccaggtgtcatgccaggcgcacgtc
aacgaggtcatcaagacggtcatcatccaccacgagaccatcttccccgacgccaaggag
ctggatgggcccgtctacgagaagtgcatggccgggggagactactgtgagagtccctac
agtgagcatggggccattgaggaggtggacaacgagggagggacagagacacataccagc
gaggatgaaagtgagcccatcgaagcgatcgccaagtttgactacgtgggacgctcggcc
cgcgagctgtccttcaagaagggtgcctccctgctgctgtaccagcgggcatcagacgac
tggtgggagggacggcacaacggcatcgacggcctggtgcctcaccagtacattgtggtg
caggacatggacgataatttctcagacacactaagtcagaaggctgacagtgaggccagc
agcggtcatggagctgaggacaaagacatgtgttcaggcaaagacatgggctcccctaca
gacaccaagatccctgacgcctacattggcaggcacagaaagaggacggagcccccatcc
cgccgcccccctgtccgccccagtgacgtccactgcatagtgcactcccagcagagccac
gggggccaggttcacacccctgagatgggttctccggtgctgggtcactccttcagcccc
cgggatctgctgcggagccgcaaccacggccagctgcccatggacagcccagagcgccgg
cggcgtaccggccacggcagcctgacaaacatcagccgccacgagtcgctgaagaagatg
gagagcccgcccatccgacgctccacgagttctggccagtacacagccgtgttccaggag
ccccacccacacccgcacggtggtggcggcaagcccctggacccggagaccatcgcacag
gacatagaggagacaatgaacacggcgctgaacgagctgcgggagctcgagaggcagagt
tcggccaagcacgcccccgacgtggtgctggacactctggagcagaggcagtcgaccggg
ggccccaccccagctagttccagcgagtccctcagccccctccacaacatcctgctgagg
gcccagaccggcgaggccgggggggcgccgatgcgccgcagcaccagctcctccagcgac
accatgagcaccttcaagccggtggtggtgccccgcatgggggtgcagctcaagccgccc
gctctgagacctaagcccctggtcctgcccaagacgggcccgacccacctccccgccgca
ccccctccccaggaccccctggacaagtcgtgcaccatgtga
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integrated database retrieval system
