Oncorhynchus tshawytscha (Chinook salmon): 112252561
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Entry
112252561 CDS
T05605
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252561
03041 Spliceosome [BR:
otw03041
]
112252561
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112252561
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112252561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
PHM7_cyt
RRM_Nup35
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
112252561
NCBI-ProteinID:
XP_024279643
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All DBs
Position
LG01:complement(50163943..50186074)
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AA seq
408 aa
AA seq
DB search
MEDECHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTAKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKS
VPQMEYGQGQWGQWSQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNLSRQSQSPAWVGGFGSPAPSQPQTGPVMPNQGNFNMAGYQTQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaatgccaccccaaaaccctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgata
actgagcaacccgatagcaggaggatgaactcttctgtcggattttctgttttgcagcaa
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaatgggaggaagatattgggaaaggaggtcaaagtaaattgggcaacc
actccaagtagccagaagaaagacacatctaatcacttccatgtatttgttggagacctg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatctcg
gatgctcgtgttgtgaaggacatgactacagcgaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccattgtgcacatggggggacagtggttaggg
ggacgccagataaggaccaactgggcaactcgcaagccacccgccccaaagaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcaccgtgtactgtggaggaatccagtccggactatcagagcatctcatgcgacagaca
ttttcaccctttggacaaatcatggaaataagagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtttctgtaaatggaacatcc
atcgaatgccacatagtgaagtgctactggggcaaagaatcccccgacattgccaaaagc
gtaccacagatggagtatggtcagggtcagtggggacaatggagccaaatgtatgggagc
ccccaggcccagcagtatggacaacagtacatggcaaatggttggcaggtgccctcttat
ggagtgtcttatggacagtcttggaatcagcaaggatttggtgtagaggactctattctg
gctgcagcagcacagaacctttcaagacagtcccagtccccagcctgggttggcgggttt
ggatccccggcaccgtcccagcctcagaccggtcctgtgatgcccaaccagggaaacttc
aacatggctggctaccagacacagtga
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