Oncorhynchus tshawytscha (Chinook salmon): 112252570
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Entry
112252570 CDS
T05605
Symbol
bicd1a
Name
(RefSeq) protein bicaudal D homolog 1 isoform X1
KO
K18739
protein bicaudal D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112252570 (bicd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252570 (bicd1a)
04131 Membrane trafficking [BR:
otw04131
]
112252570 (bicd1a)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112252570 (bicd1a)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112252570 (bicd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BicD
ATG16
ApoO
ZapB
Motif
Other DBs
NCBI-GeneID:
112252570
NCBI-ProteinID:
XP_024279658
LinkDB
All DBs
Position
LG06:43349566..43450825
Genome browser
AA seq
1024 aa
AA seq
DB search
MAAGGGCGETVDQYRAEVERLTQELADANREKIRAAECGLVVLEENQTLKQQYADLESEQ
ETLKQELEQLQEAFGQAYSNQRKVAEDGESNEESLLQESASKEAYYMGRLLELQTELKLS
RSVASNASNESERLNAVLQENSESNEVLELQRSRMREEIRECKFREARLLQDYTELEEEN
ITLQKLVSTLKQNQVEYEGLKHEIKVLEEETVLLNSQLEDALRLKDISQSQLEEALDALK
IEREQKNSLRKELSHHITLSDSVYGAGAHLALTATVDGLKFATEEVGSNGTAMPNGTNGN
EDSNSDCNGHLGLVKVNGDYRLPRKGEGLHGPVSDLFSELNLSEIQKLKQQLLQVEREKS
SLLMNLQEAQTQLQHTQGALTEQHECVHRLTERVNAMKRLHSDKEMADAQESETHDGLPA
PGRRDYVVNIHGMEILECKYKVAVTEVIDLKAELKALKEKSNQCVEGQGEEWSSSDGKVQ
ALDEQVKRLEKSCREARDKVTRLEAELQAATGVATESHDMLNRAQDELVTFSEELAQLYH
HVCLCNNETPNRVMLDYYRQSRNTRSGSLKGSEDPRALLSPRLARRLAAVNAGLSEAPRS
PMDSPSKDPPSGDNGTTGRESPAPGSQGNPIRTPIGSPVINSSNGSPSSSSVPPEAGGDL
RKEPMNIYNLNAIIRDQIKHLQRAVDRSLQLSRQRAAARELAPLFDKDKEACMEEILKLK
SLLSTKREQIATLRLVLKANKQTAEGALANLKSKYENEKCMVTETMMKLRNELKALKEDA
ATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLE
FDTEQTRDRGRGAKVPKIKSSPPKVSRRAALTAPPSPTMIHSPSSTCSHTFNTSLTLCSP
PSLELPLSSNPWSASDGGTSQTSSLVSSLPPLGHPQWSLGTQTFIIDPESLSLECCRLVN
SRDASPHSPSSAPVSPYRSPIPKTWQHLSPGSVRTRTQKDAPRPSALVTSPSNPVPHAYH
SKMP
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggtggaggatgcggggagactgtggatcagtaccgggcggaggtcgagcgg
ctcacccaggaacttgcggatgcgaacagagagaagatcagggcggcagaatgcggtctt
gttgtgttggaagagaaccagactttgaagcagcagtatgccgatttggaatcggagcag
gagacgctgaagcaggagttggaacaattacaagaggcgtttggccaggcctactccaac
cagcggaaagtggcggaggacggcgagagcaacgaggagtcactgctgcaggagtcagcg
tctaaggaggcctactacatgggccggctgctggagttgcagactgagctgaagctgagc
cgctcggtggcgtccaacgcgtccaacgagagcgagaggctcaacgccgtgctgcaggag
aacagcgaaagtaatgaggtgctggagttgcagcggagccggatgagggaggagatcagg
gagtgtaaattcagagaggcccgtctcctacaggactacaccgagctggaggaggagaac
atcaccctccagaaactagtgtccacactcaaacagaaccaggtggagtatgagggtctg
aagcatgagatcaaggttctggaggaggagactgtgctgctgaacagccagctggaagat
gctctgcgtctgaaggacatctctcagtcccagctagaggaggccctggatgccctgaag
atcgagagggagcagaagaacagcctgaggaaggagctgtcccaccacatcaccctcagc
gacagtgtatatggggccggagcccacctggcactcaccgccacggtcgacgggctcaag
ttcgccacagaagaggttgggagtaatggtacagccatgcccaatggcaccaatgggaat
gaggatagtaacagcgactgtaacggccacctgggactggttaaggtgaacggcgactac
cggctgcccaggaagggggaagggctgcacggtcctgtgtcagacctcttcagcgagctc
aacctgtctgagatacagaaactcaaacagcagctccttcaggtggagcgtgagaagtcc
agcctcctgatgaacctgcaggaggcccagacccagctgcagcatacgcagggggccctg
accgagcagcacgagtgtgtccaccgcctcaccgagcgcgtcaacgctatgaagcgcctc
cacagtgacaaggagatggccgacgcccaggagtccgagacgcacgacgggttgcccgcg
cccggtcgccgcgactacgtggtgaacatccacgggatggagattctggagtgtaagtac
aaggtggcggtaaccgaggtgatcgacctaaaggcggagctaaaagctctgaaggagaaa
tctaaccaatgtgtggagggccagggggaggagtggagcagcagcgatgggaaggtccaa
gctctggacgagcaggtcaaacggctggagaagagctgccgcgaggcccgcgataaggtg
acgcgtttggaggcggaactacaggcggcgacgggcgtggccacagagagccacgatatg
ctgaacagggcgcaggacgagctggtgacattcagcgaagagctggcccagctctaccac
cacgtgtgtctctgcaacaatgagacccccaaccgcgtcatgctggactactaccgtcag
agccgtaacacccgcagcggcagcctcaagggctctgaggacccccgggcacttctctcc
ccccgcctggctagacgcctcgccgccgtgaacgctgggctctcagaggccccccggagc
cccatggactcaccctccaaagacccccccagtggggacaacgggacaacagggagggag
tccccagcaccaggcagtcaggggaatcccatccgcacccccattggctccccggtcatc
aacagctccaacggctctccctcctcctcttccgtccctcccgaggcaggcggggacctg
cgtaaggagcccatgaacatctacaacctgaacgccatcatcagggatcagatcaaacac
ctgcagagagccgtggaccgctccctccagctgtctcgacagagggcagccgcccgggag
ctggcccccttgttcgacaaggacaaggaggcctgcatggaggaaatcctcaagctcaag
tccctcctcagcaccaagagggagcagattgccacgctcaggctggtgctcaaagccaac
aaacagactgcagagggggcgctggctaatctaaagagcaagtatgagaatgagaagtgc
atggtgacagagaccatgatgaagctgaggaacgagctgaaggctctgaaggaggatgcc
gccaccttctcctctctcagggccatgttcgccaccaggtgtgatgagtatgtgactcag
ctggatgagatgcagagacagctggctgcggcggaggatgagaagaagaccctgaactcc
ctgctccgtatggccatccaacagaagctggccctgacccaacgcctggaggacctggag
tttgacaccgagcagacccgggaccgcggccgcggcgccaaggtgcccaagatcaagagc
agcccgcccaaagtaagtcgacgagccgccctcacagctccccccagccccaccatgata
cacagcccttcttccacctgctcccacaccttcaacacctccctgaccctctgcagccct
ccctccctggagctgcccctctcctccaacccctggtcggcctcagacggcggcacttcc
cagacctcatccctggtctcctctctgcctcccctgggtcacccccagtggtccctgggc
actcagaccttcatcattgacccagagtcgctgagtttagagtgctgtcgactcgttaac
agtcgagacgccagtccgcactctcctagctccgcccccgtgtctccttaccgctcaccc
attcctaagacttggcaacacttgtcaccggggtcggtcagaactcgtacccaaaaagac
gcacctcgcccctctgctctggtcacatctcccagcaacccagtccctcacgcctaccat
tccaagatgccctag
DBGET
integrated database retrieval system
