Oncorhynchus tshawytscha (Chinook salmon): 112252578
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Entry
112252578 CDS
T05605
Name
(RefSeq) cat eye syndrome critical region protein 2 homolog isoform X1
KO
K25830
cat eye syndrome critical region protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112252578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112252578
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
CERF complex
112252578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
DDT
AT_hook
Motif
Other DBs
NCBI-GeneID:
112252578
NCBI-ProteinID:
XP_024279682
LinkDB
All DBs
Position
LG06:43687367..43747751
Genome browser
AA seq
1557 aa
AA seq
DB search
MSQGCTISVEEIQSWWEVPAIAHFCSLFRTAFNLPDFEIEELEEALQKQDTDFLADLLVS
LLQGCYQRTDITPQAFSSYLDDIINYRWELEEGKPNPLRQGPFEELTPRTQVELLHRLCD
YRLDAADVFDLLKGLDADSLRVEPLGQDGSGALYWYFYGTRMYKEEPVKRKAEQLDEAPE
IKPTEKRKRGRPPKKKVEEIQLSEVESEVKENGLEGLHSGTDRERGAWSLMCDTEEQWAS
LAESIRDKTSPQDRHLYRIISQNFLPEISSMIEHKVNEQKQRLLDPTPVRSSYRLSEKRM
SQEEEDTLQAIANREQQKQKDEDMDRQALLVEQRREEEMLLQEERQREELERLQAVEERA
RRRKLREEKAWLISQGKELPPELLHLEPHSPIRRSRRTKEFYEIDDDYTALYKVLEALRA
HKDAWPFLEPVDESYAPNYNAVIQTPMDLSTIETKLNEGEYIAKEEFVSDMKLIFENCIE
YNGEDSEYSIMAESLERCFSRALLKHFPSEDGDTDEEFHVSGEDRERDRKEKRRSKGNKQ
AGPESLIRATEQASRKRTHPGGKGSTPMEEEGNKPAQPPPPPHWANGPPHPHGIPHGQPH
PGNLYYPAQQQLQHPPNAHGPHMYGQRMDPGYAYPGQGHMPRPGDPNAHHMPQHYSMQPH
MRDGHHVGHGYQMGLDGRPLQPQHHRQQHPYMGPTHGPSLGPRPVALQSGGLCTPMPDSS
MYLSRQRTNGHPLHPGGNCYPGPDIPPRHNYPAFHPGMGMPPNMWSGMNHQGQERPSGPG
KKVQNMANHQQLSYNPGGPRPMGPKPWPEQPGGPGGYPSHPNGPMALRTPMPHQDSRQCL
ASMLESPEMIALQQLSASSTGLSAGSSHQDMGNFQQQPLQGVGSAPTHPSQYHPPPEIQL
LRPARDNGPDSQAAHHADLKPKGSTSDPKTSNNHAGALVTPVPSEQERTSFPRPTEPPSR
PTRGMQSPSAPNWGRSQERVSGTREQAASGLGLPQSSETNDNQEGESRGQSVSQTPPQNN
PSIVHPPHPHNAPRSQNSHHSQNPPQHITQSPPQQILENATRLQNAHQHNTQNAQQQNIP
QHITRNAPQQGSQNPHQQNSQNTPPHVAQNVPQPISMHGMPQSDPQGAQPGPGPSQPAPL
TSLPPSHPVSQLPPQPSPDDQRPSEPTSRRDSGGSSGNSSMMKSGPPNGIYKQQTFSPKA
QQTQPGNQGPRGPAPGHNPAIPLHSQGQDNGAMRQYDMGSPTHLHYSQPMGKPMPPSNQQ
PYPNQPVPQTMNPHHNSAGYPTYHQQGAAYPYHMAQQQHPQGHPNMYPQYQQQHFYPQPP
GNIRGGYPSEEWHRQQQYQPRHPMPSNTYLPATSANVNGRLKEGSSMGSPLGSEGSAGSL
MSPNPLPEGPRGGSVEKESMEAGSPVKHQPARVEESSERPESPKEILDLDSHNAAARRRS
AQPPPHVANFLYDSRAVHTGMQQGGAPPPHIMSHAPYPNQPGYPSGHYAPRDPTPTSWKP
CTGPSTFPFPGADPHGHVQTSPGRRPLPGHDGPAERPGARTLLSPRAADDVSQWSQQ
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagggatgtacaatttctgtggaagagatccagtcttggtgggaagtccccgcc
atagcccacttctgttcgctgttcaggactgcattcaacctaccagactttgaaattgag
gagttggaagaggcgctacagaagcaggacacagactttctggctgacctcctcgtctca
ctgctgcaaggatgctaccagcgcacagacatcactccccaggcgttcagcagttatctg
gacgacatcatcaactaccgctgggagctggaggaggggaagcccaaccccctgcgccag
gggccctttgaggagctgaccccgcgcacacaggtggagctgctgcacaggctgtgtgac
taccgcctggacgccgcagacgtcttcgacctgctcaagggcctggatgcggacagcctg
cgcgtggagccgctggggcaagatgggagcggtgccctctactggtacttctatggtacc
cgcatgtacaaagaggagccggtcaagaggaaagcggagcagctcgatgaagcccctgag
ataaaaccaacagagaagaggaaaaggggaagaccaccaaagaagaaagtggaggaaatc
cagctaagtgaggtggagagcgaagtgaaggagaatggactggaaggtctacactcaggc
acagaccgggagcgcggtgcctggtccttgatgtgtgacacggaggagcagtgggccagt
ctggccgagagcatcagagacaaaacgtccccccaggaccgccacctctaccgcatcatc
agccagaacttcctccctgagatcagcagcatgatcgagcacaaggtgaatgagcagaag
cagaggctgctggaccccaccccagtacgcagctcttaccggctctctgagaaacgcatg
agccaagaggaggaggacacgctgcaggccatagccaatagggagcagcagaaacagaag
gatgaggacatggacaggcaggccctgctggtggagcagagacgagaagaggagatgctg
ctgcaggaggagcgccagagagaggagctggagagactccaagctgtggaagagcgagcg
cggcggcggaaactgcgtgaggagaaggcctggttgatatcccaggggaaggaactgccc
cccgaactgctgcacctggagccccactcacccattcgacgctcccgcaggacaaaagag
ttctatgaaattgatgatgattatacggcgttgtacaaagtgttggaggccctgagagcc
cacaaagatgcctggcccttcttggagcctgtggatgaatcctatgcccccaactataat
gcggtcattcagactccgatggacctatccaccatcgagactaagctgaatgaaggggag
tatattgccaaggaagagtttgtgtctgacatgaagctcatatttgaaaactgcatcgag
tacaatggggaagacagcgagtacagcatcatggcagaatccctggagcgttgtttcagc
cgggcgctactgaagcacttcccgtcggaggacggcgacacggacgaggagttccacgtg
agcggcgaggaccgtgagagagaccgcaaggagaaaaggcgaagcaaaggcaacaaacag
gcagggccagaaagcttgatccgagccaccgagcaggcctcacgcaaacggacacatcca
gggggcaagggcagcaccccaatggaggaggaggggaataagccagcacagccacctcct
cccccccactgggccaatggacccccacacccccatggcatacctcatggacaaccccat
cctgggaacctttactacccagcacagcagcagctccagcacccccctaatgcccacggc
ccacacatgtacggccagaggatggaccccggctacgcctaccctggacagggacacatg
ccccggcctggggatcccaatgctcatcacatgcctcaacattacagcatgcagccacac
atgcgtgatggacaccacgttggccatggataccaaatggggcttgatggccggcctctt
cagccacagcaccaccggcagcagcacccctacatgggtcccacccatggtccctcactg
ggcccccgtcccgtggccctccagtctgggggcctctgcacccccatgcccgacagcagc
atgtacttgtcccgccagcgcaccaacggccatcccctacaccccggagggaactgctac
cccgggcctgacatcccaccacgacacaactacccagccttccatccaggcatgggcatg
cctcctaacatgtggtcagggatgaaccaccaaggccaggagaggcccagtggacctggg
aaaaaagtgcaaaatatggctaaccaccagcagctctcttataaccccgggggacctcgt
cccatgggccccaaaccctggccagagcagcctgggggccccggagggtacccctctcat
cccaatggacccatggccctgcggacccccatgcctcatcaggactccaggcagtgtctg
gcctccatgctggagagcccagagatgattgccctgcagcagctgtctgcctcttccacc
ggactctctgctggctcctctcaccaggacatgggcaacttccagcagcagcccctacag
ggtgttggcagcgccccaactcacccctcgcagtaccaccctccccctgaaattcagctg
ctgcgtcctgccagagacaatggcccggacagccaggctgcccatcacgcagatttgaag
ccgaaagggtccacgtcagatcccaaaacatccaacaaccatgcaggagctctggtaacc
cccgtcccatctgaacaggaacgcacctcgttcccccgtcccacagagcctcccagtcgc
cccactcggggcatgcagagcccctctgctccaaactggggcagatcacaggagagggtt
agcgggacccgggagcaggctgcgtctgggctgggactcccacagagctcagagacaaac
gacaaccaagagggggagagcagaggacaatctgtcagccagactccccctcagaacaac
ccttccattgttcatcctcctcacccccacaatgcacctcgctcccagaactctcatcac
tcccagaatcctccacagcatattacccagagccccccccagcaaatcctagagaatgcc
actcgtcttcagaacgcccatcaacacaatacccagaatgcacagcaacaaaacatccct
caacatatcactcgaaatgccccacagcaaggatcccaaaacccccaccaacaaaactct
cagaacacacctccacatgtggcgcagaatgttcctcaaccaatctccatgcatggaatg
ccacagagcgacccccagggggcccagcctggccccggtccatcccagccagcacctctc
acctccctgccccccagccaccctgtgtcccagttgcctccccagcccagcccagatgac
cagaggccaagcgagcccactagcaggagggactctggaggcagttctggtaactccagc
atgatgaagtctggacctccaaatggcatctataaacaacagacgttcagtcccaaggca
caacagacacaacccggtaaccaggggccaaggggaccggcacctggtcacaacccagcc
attcctctccactcccagggccaggacaatggagccatgcgtcaatatgacatgggcagc
ccaacacatctgcactatagtcaacctatgggcaaacccatgcccccttcaaatcaacag
ccttacccgaaccaacctgttccccagaccatgaacccccaccataactctgccggctac
cccacctaccaccagcaaggagctgcctatccataccacatggcccagcagcagcatccc
cagggccaccctaacatgtacccccagtaccagcagcaacacttctacccccagcccccg
ggcaacatccgggggggctacccctccgaggagtggcacaggcagcagcagtaccagccc
cgccaccccatgccctccaacacctacctgcctgcaactagtgccaacgtcaatgggcgc
ctgaaggagggcagcagcatgggctcccccctgggctctgaaggctccgcgggcagcctg
atgtcccccaatcccctgcccgagggcccccgtggaggatctgtagagaaggagagtatg
gaggccggcagccctgtgaagcatcagcctgctcgggtggaggagagctcagagcggcca
gagagccccaaagagatcctggacctggacagccacaacgctgccgcacgccgccggagt
gcccagcctccacctcacgtggccaacttcctgtacgattcccgagcggtgcatactggg
atgcagcagggcggggccccgcctccccacattatgtcccatgctccataccccaaccag
ccaggttaccccagtggacactatgcccccagagaccccacccccacctcatggaagccc
tgcaccggccccagcaccttccctttccccggggcagacccgcatggccatgtacagaca
tccccaggccggaggccacttccagggcatgatggtccagcagagaggcctggcgcccga
acacttctttcacccagggcagcagatgatgtctcccagtggtcccagcagtaa
DBGET
integrated database retrieval system
