Oncorhynchus tshawytscha (Chinook salmon): 112252592
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Entry
112252592 CDS
T05605
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112252592 (lrrc29)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112252592 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box
F-box-like
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_5
Motif
Other DBs
NCBI-GeneID:
112252592
NCBI-ProteinID:
XP_024279723
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All DBs
Position
LG06:complement(44300705..44305925)
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AA seq
649 aa
AA seq
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MGEITMETPELPLEIVTYILSFLKASDRKEASLVCWSWYDASQDLQFQRNDTFKFPASIS
SLDLIRGLSRRSRCSLVISHLDGSSMSRAVLQEIGLHLGPRLESLALPGSSVTESSLLAL
LPHLTALRRLDLRGLDSLFMSGAFLSKEEHRQQVGVALAGLEELDLSDLRYLSDLTFNRL
TGCTLRLRRLSLAGCHIAFEFDPYRGCPVGPDSSALLSLRNLRRLLQEQASTVRGLDLSR
TSITPESLRSVAQVGGLSLEELRLRGCKELTDYSVEVLCKHQPGLRILDLSACTELTSRA
VLAVALSLKGLRFLSLSRDWRMTDKGLADLMMLPELRNLDLSECLHVSGAEIVKGLSALE
PRARLETLSFKSCTYIRDLAVFSLARLLGSSLRELDLTSCVYLTDLSVRAIATYLPGLVV
LRLGWCKEITDWGLLGMVELTKECDPSKEMEDKGPSFTRTFGNMGFFRPPSMPFQEKPRL
VTDEDLGVFKEQDGSSLLALRSLQELDLSACSKLTDSSITQVLRYPDLQRLSLSMLPEIS
DDSLASVAYHCRSLTSLALSHCPQISDQGIARAAPYLARLQHLYLSCCDAVTDRSLSMLV
QHCKRLRTLDISMCKDISITTVDLLQSQLPFLENVHCRFVGGADLTLTL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaataaccatggaaacgcctgagttacctcttgagatcgtcacctacatccta
agtttcctcaaagcatcagacaggaaggaagcctctctggtgtgctggagctggtatgat
gcaagccaagacctccaatttcagaggaatgacaccttcaagttcccagcctctatctcc
tccctggatctgatccggggcctgagtaggcgttcccgctgcagcctggtcataagccat
ctggatgggtccagtatgtcccgggctgtgcttcaggagatagggctccatctaggccct
cggctggagagcctggccctgccaggaagcagtgtgaccgagtcttccctcctggccctg
ctgccccacctgaccgccctgcgcaggcttgacctccgtggcctggacagcctcttcatg
tctggagccttcctgtccaaagaagagcaccgccagcaggtgggggtagctttagcaggt
cttgaggagctggatctctctgacctgcgctatctatcagatctcaccttcaaccgactc
acaggctgcactctcagacttcgccgtctctccctggccggctgccacatcgcctttgag
tttgacccgtaccgtggctgccccgtggggcctgactcctctgccctgctctccctacgt
aacctccgcaggctgctgcaggagcaggcctccactgtgcgggggctggacctgagcaga
actagcatcaccccagagtcgctgcgctccgtggcccaggtagggggcctgtctctagag
gagctgcgtctgcggggctgcaaggagctgacagactactccgtggaggtgctctgcaag
caccagcctggcctccggatcctggacctcagcgcctgtacagagctcaccagccgggct
gtactggctgtggccctgagcctgaagggcctccggttcctctctctgtcccgggactgg
aggatgacggataaagggctggccgacctgatgatgctgccggagctaaggaacctggat
ctgtctgagtgcctgcatgtcagtggggctgagatagtgaaagggctctctgccctggag
cccagggcacggttggagacactcagcttcaagagctgcacctatatcagggatctggct
gtgttctctctggctcggctgctgggctccagtttgcgggagctggacctcacctcctgc
gtctacctcacagacctgagcgtgcgtgctatcgccacctacctgcccgggctggtggtg
ctgcgactgggctggtgcaaggagatcacagactgggggctgctgggcatggtggagctc
accaaggagtgtgatcccagcaaggaaatggaggacaaggggcccagcttcacccgtact
tttggaaatatgggtttcttccggcctcccagcatgcccttccaggagaagccccggctg
gtgacggacgaggacctgggggtgttcaaggaacaggacgggtcctcactgctggccctc
aggagcctccaggagcttgacctgtctgcctgctccaaactcactgacagcagcatcaca
caggtgctgcgttatccagacctccagcgcctctctctctccatgctgcctgagatcagt
gatgacagcctggcgtcggtggcctaccactgccgcagcctcaccagcctggcactcagc
cactgcccccagatcagtgaccagggtatcgcccgcgccgccccctacctcgccaggctg
cagcacctctatctgtcctgctgcgacgcagtcacagataggtctctctccatgctcgtc
caacactgtaagagattgcggacgctggacatctccatgtgtaaagacatctccataaca
acagtggacctcctccaatcccagctgcccttcctagagaatgtccactgccgctttgtg
ggcggagctgacctgaccctcacactctga
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