Oncorhynchus tshawytscha (Chinook salmon): 112252607
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Entry
112252607 CDS
T05605
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252607
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112252607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
DUF745
AAA_13
FxsA
SOGA1-2-like_CC
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
112252607
NCBI-ProteinID:
XP_024279760
LinkDB
All DBs
Position
LG06:complement(44963891..45077003)
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AA seq
1078 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERDTLRAQVPSSTAHMLMDWLDMDRYSERVSVNLCSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHYHKLNSTEEMLKQELLSRTSLETQKLDLMD
EVSYLKLKLVDMDEEQNHNDSSEDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EAQGESGARKAYSQCPDVGLGGSDVEEFCCRCGGQNGFLQELRFLKSKVDELEGEKSQYE
KKLKATKLSISYSLHVCYQSLLSKLSSLKLTVEHTQVEKQHWEERWRTAQAEIADLQQML
ASKDSAIEGLQSQLVSRGPMTNENPERVEEVYRRQLTDKYQELQRLKMGMESLVATNYEK
DRHIEELTVLLGQYRKMKEVMALTQGSSEKLLVGSSEEELSGSLKMRAITHKAHSDIIRS
AMSSRGSSPLLVSPSSFQKELDSSCRSIQTSLETSMVMVSQSDAGCFYSGEWSQPQMLSS
SLEELQSGSLPKHVVVDQPVEPVSENQHIEMNKYQTLPGKLSRPDMNGDREQCSTPDQLS
PDDSEDSEFHLRKSERLDESTLSDLSPLSSGVDSGQQSPVSPENKKNHRGIKKLWGKIRK
TQSGSLQGEDLEPGEFKRGGLRATAGPRLARAGETLTSVRDLKTPFSKWTPEQVCCWLEE
YGLGQYVILARHWADSGQTLLSASPQDLEKEMGIKNPLHRKKLQLALKSFSTKLTEKSSE
LDHIWVTRWLDDIGLPQYKDQFHQGRVDGRMLQYLTVNNLLFLKVTSQLHHLSVKCAIHV
LHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLI
ILEPRFNSDTLAMLLNIPPQKTLLRRHLSTNFNMLVGSQAQQEKREFMESSGYTPLSTTA
KVRPKKLGFSNFGHLRKKRCDDSTDYICPLEAAQAQAQLQAVVNGAHRPYSGFRGLSPIL
DRDPDRREQMAVTEGTVLQIEALSEGINQLTGFREERGAGAVPNIKGRPILVIRETTL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcagccttggagcaaatggatgacatcatt
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctccccgggc
agcgcgggacccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagagggacaccctgagggcccaggtccccagcagcaccgctcac
atgctcatggactggcttgacatggacaggtactcagaaagggtctcggttaacctctgc
tccccggtgaacaatgagagctatcaggagcggctagttcgcttagagggggacaaagag
tctctggtgctccaggtgagcgtgctcacagaccaagtggaggcccagggagagaagatc
cgagacctggagagctctctggaggagcactaccacaagctcaactccactgaggaaatg
ctaaagcaggagctgctgagccggacctcattggagacccagaaactggatctgatggat
gaggtttcctacctgaaactgaagctggtcgacatggacgaggaacagaaccacaacgac
agcagcgaggaccagcagaacaaagctgagtgtgtggtaaatctgattagcgagctccag
gagcagatgtgtaggtttcaggaagagatccatacccggatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcaaggcctacagtcaatgccccgacgtgggcttg
ggtggctctgacgtggaggagttttgctgtcgctgtggaggacagaatggctttctgcaa
gaactccggtttctcaagagtaaagtggatgagctggagggggagaaatcgcagtatgag
aaaaaactaaaggccacaaagctgtctatctcttactctctccatgtgtgttaccagtcg
ctcttgtccaagctctctagcctgaagctcactgtagagcacactcaggtagagaagcag
cactgggaggagcgatggcggaccgctcaggcggagatagcagacctacagcagatgctg
gcttccaaagactctgcgattgagggcctacagagccagctggtctccagaggcccaatg
accaatgagaacccagagagagtagaggaggtgtataggagacagctgacagacaaatac
caagaattgcaaaggttgaaaatggggatggagtctttggtagcaactaattatgagaaa
gaccgtcacatagaggagctgactgttctcctgggccagtacaggaagatgaaggaggtg
atggccctcactcaagggtccagtgagaagctcctggttgggagcagtgaggaggaactg
agtgggagtctgaagatgagggctatcacccataaagctcattcagacatcatccggtca
gcgatgtcttctagaggctcctctcccctgttagtgtctccctcgtccttccagaaagag
ctggactccagctgccgcagtatccagacctccctggagacgtcgatggtgatggtctcc
cagagtgatgctggttgcttctacagcggagaatggtcccaaccacagatgctttcaagt
agcctggaggagttacaaagtggatcgttaccaaagcatgtcgtggtggatcaaccagtt
gaaccggtttcagagaatcagcacatcgaaatgaacaaatatcagaccctaccagggaag
ctgtctcgacctgacatgaatggcgatcgagagcagtgttcgacgccagaccagctgtcc
cctgacgatagcgaggacagtgagtttcacctaagaaagtcggagagactggatgagtcc
acactgtcagacttgtctcccctgtcgtctggagtggactcaggacagcagtcccctgtc
tctccagagaacaagaagaaccaccggggcatcaagaagctctggggaaagataaggaag
acacagtctggcagcctgcagggagaggaccttgagcctggagagtttaagaggggggga
ctgagagccaccgccggccctcgcctggcccgggccggagagacattgacctctgtgcgg
gatctgaagacgcccttctccaagtggactccggagcaggtgtgttgctggctggaagag
tatgggctgggccagtatgtgattctggcccgacactgggccgacagcgggcaaactctc
ctctctgcctcaccacaggatttagagaaggagatggggattaagaatccactgcacaga
aagaagctgcagttggccctgaagtcgttcagcaccaaactgacagagaaatcctctgaa
ctggaccacatctgggtcacacgttggcttgatgacattggtttacctcagtacaaggat
cagtttcaccagggaagggtagacggcagaatgcttcagtacttgacagtgaacaacctc
ttgttcctgaaagtgaccagtcagctccatcacctcagtgtgaagtgtgctatccacgtc
ctccacgtcaacaagttcaaccccaactgcctgaagagaaggcctggagatgagaacaag
acgtctccctcggaggtggttcagtggtctaaccacagggtgatggagtggcttcgctcg
gtggatttggcggagtacgctcccaacctgagaggcagcggggtgcacgggggccttatc
attctggagcctcgttttaactcagacaccctggccatgctgctgaacatcccccctcag
aagaccctgctgcgacgccacctgtccaccaacttcaacatgctggtgggctcccaggct
cagcaggagaagagggagttcatggagtcgtctggctacactcccctcagcaccacagcc
aaagtcaggccaaagaagttgggcttctcaaacttcggccacctgaggaagaagagatgt
gacgactcgactgactacatctgccccctggaggcggcccaggcccaggctcagctccag
gcggtggtgaacggggcccaccggccctactccggctttaggggcctcagcccaatcctg
gacagagacccagacagacgagagcagatggcggtgacagaggggaccgtactgcagata
gaagctctttctgagggaataaaccaactcacaggtttcagagaggagagaggggctgga
gctgttccaaacatcaaaggcagacccatactggtcataagggaaaccaccctctga
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integrated database retrieval system
