Oncorhynchus tshawytscha (Chinook salmon): 112252613
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Entry
112252613 CDS
T05605
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112252613
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112252613
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112252613
NCBI-ProteinID:
XP_024279785
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Position
LG06:45735587..45751768
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AA seq
468 aa
AA seq
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MPQKEYYNRATWESGVASMMQNKVYDICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAIYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEK
QQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNTDGCPPSDGGGENTNSISSNG
EDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQPTTPGWISFSSGS
MLGRPDTALTNTYSALPPMPSFTMANNLPMQAPVPSQTSYSCMLPTSPSVNGRSYDTYTP
PHMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgttgcgtccatgatg
caaaacaaggtgtatgacatctgtaacgaaggtcacagcggagtgaatcagcttggcgga
gtgttcgtcaacggcagacccctgcccgactcaaccagacagaaaatagtcgagcttgct
cacagtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaa
gtccaagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcaga
tactatgaaactggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagca
actcccgaggtggtcggaaaaattgccatatacaagagggagtgcccgtcaatcttcgcg
tgggaaattcgtgacagactgctttcagagggggtctgcacaaacgataatatacccagt
gtaagttcattgagtgtgtcatcgataaacagagtactgcgcaacctggctagcgaaaag
caacagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactggg
acgtggggtacccggccgggctggtaccccggaacctcagtgccaggacagcccaacaca
gatggttgcccaccgtcagacggcggaggtgagaacactaattcaataagttcgaatgga
gaagactctgatgagacccaaatgagacttcagctgaaaagaaaattgcaaaggaaccgc
acttcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactat
ccagatgttttcgcaagagaaagacttgctgcaaaaattgacctcccagaggccagaata
caggtgtggttttcaaatagaagggcaaagtggaggagagaggagaaactccggaatcaa
aggcggcaagccagtaactcctccagtcacatccctatcagcagcagtttcagcaccagt
gtctaccagcccatcccacagcccacgacaccaggttggatatcgttctcgtcaggatcc
atgttgggaagaccagacacagcccttacaaacacatacagtgccctgccacctatgcca
agcttcaccatggccaacaacctgcctatgcaagctcctgtgcccagccagacctcctac
tcctgcatgctgcccaccagtccctcagtcaacgggcggagctacgacacgtacacccct
cctcatatgcaggcacatatgaacagccagtcaatggcaggttcaggaggcaactcaaca
ggtctcatctctcctggagtatctgttcctgtccaagtgccaggcagtgaagcagacatg
tcccagtactggcccaggctacagtag
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