Oncorhynchus tshawytscha (Chinook salmon): 112252623
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Entry
112252623 CDS
T05605
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112252623 (lamb4)
04518 Integrin signaling
112252623 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112252623 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
Motif
Other DBs
NCBI-GeneID:
112252623
NCBI-ProteinID:
XP_024279810
UniProt:
A0AAZ3QX29
LinkDB
All DBs
Position
LG06:46463112..46484195
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AA seq
1789 aa
AA seq
DB search
MVSLFLLVLLVPGALLQEDCDVNSCHPQLGDLMVGRAAQLSASSTCGRNGPQNYCILGYL
EDEQKCFKCDSRQPYNLYNNQNSHQIENVITTFGPERKMKWWQSENGVHQVSIRLDLETL
FQFSHLVLTFKSFRPAAMLVERSKDYGYSWKVFRYFAEDCASHFPGVSQGPADSTDDVVC
DSRYSASEPSTDGEVVLKALDPSFDIENPYAPHIQEQITLTNLRVNFTHLFTLGDTLLGR
KKRNPQEKYYYALYEMVVRGSCFCNGHASMCMPVDGTRGDVLNEPGVIHGRCVCQHNTVG
TNCERCQDFYNDVPWRPAGQSDPHACRRCNCHGHSETCHFDIDQYQASGGVSGGVCDGCR
HDRMGPQCERCRPYLYQDPQLSMEDPRGCISCDCDLTGSLDNGLCDPVSGRCVCKENVAG
DRCDRCKFGFYGFSQEDPTGCQRCRCNFLGSVLIPYPCDQVTGQCICHRFAMGPLCDQCL
PGYWGLGNTVHTCSPCDCDHGGAYSSTCSSLDGQCQCLPNMVGRSCGDPAPGHFLAALDY
YLYEAENAAPLEGKSSSPLLKPTDLPVCEEYYKQQGYDIKYQNGRLVLTRRSKRQARRRR
QGQRSIPLDPGSALQIVPRERTPDVPITWTGPGFVRVLDGAGLRFTVDNLPASLDYHLVI
RYEPESPDDWMASVSIVPLLAGDGGCPTSPKGEKTLTIPGAARVAILDTPVCLNAGRRYY
VDITFRKQPNSNPQSSSHTLVDSMGLIPKMESVQDFCSQSELDSFRRFRCFELAAEQETL
PDVCYGLIGSLSARIHNGAMLCRCNIQGSHGPYCSKFGGLCECKANVVGRCCDSCAPLNF
GFGPNGCAPCECDRRGAVAELCDQVRGQCPCRMEVGGRRCDRCLSGYYGFPLCRPCKCNG
LAELCDQDTGACLDCREHSTGYNCESCVEGYFGDPVSREPCKPCLCPDTQSSGRFFASTC
NKDPESGSLTCDCLAGHTGLRCDACSAGFYGGLTAPGGGGCEECLCNNNIDPADSDACDS
VTGECLRCLHNTQGPRCQSCKPGYYGDALAQDCKECSCDRQGTDVTQCPLGSPCFCDPLT
GQCPCRAGAVGTLCDECATGFWNIQGESGCQPCKCDPANSFNNHCDKVTGHCQCHTEFGG
RQCDECGENHFGNPDLQCVSCDCNMEGTDRPACNPLTGECLCRIGVMGIFCDECAPGYDQ
VFPACLPCHPCAVLWADNVTDVHRAAQRMRTFIPPHGEQLEPGHSRQLQRMLEMHSKLDY
LGNLTGRSLPRVKDVEKLCVIISKLKDSIDPNAIIVDSSSLLNTEIDNIHHEFKMLLDNL
RNKISEAPTLDLKEMQEALEKIRKQHADFMADEKKVKEAERALENSMDTRQEIKDHLSSC
SILGDMEGLEKKVKALSVAKLNKNICGGPGDEECSKSECGGALCRDFLGQRECGGPMCKG
SFPVSHNATKTAEQVENDLIDLLQKLKDSKIKINEAKQMTQGTHEQAKELQKKITDSKEK
FKREKNDTKDLINRVKDYLTDEMVAPEDIENLVKVVLAIQLPGSPDDIRSMIQNIRGVLT
NFIDFKEDLKKLKDQAKTAQDLQEKAQAIRDRIRGIDVTDLKKTMTDTENTQDRVEQDLE
KAKESNGVSDKMIKEIEKKLNNIETNLNSTRTPEMLEEIEVLKSKTEMNREQAEQAKADA
DAAIGATTDAEKGLDKVTALFDRLKTGNTNQTDNEAANERLKNITVEAEKVAKDVQDKMK
QIDDLEKKIQDFIRNKEDKAKEVAMLLEMVEALQKEIAARVDGYINCTS
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctgttcctgctcgtgttgctggtacctggggccctcctccaggaagactgt
gatgtcaactcttgccacccccagctgggggacctgatggtgggccgcgctgcccagctc
tccgcctcctccacctgtggacggaacgggccccagaactactgcatcctcggatacctg
gaggatgagcagaagtgtttcaaatgtgactccaggcagccctacaacctctacaacaac
caaaacagccaccagattgagaacgtcatcaccacctttggccctgagcgcaagatgaag
tggtggcagtctgagaacggggttcatcaagtcagtatccggctggatctggagactcta
ttccagttcagccatcttgtcctcactttcaagagtttccgtcctgccgccatgctggtg
gagaggtccaaagactacgggtacagttggaaggtgttccgttactttgccgaggactgt
gcctcccacttccctggggtctcacaggggccggctgacagcaccgatgacgtcgtctgt
gacagcagatactccgcctcagagccatctactgacggagaggtggtgttgaaggctcta
gatccaagctttgacatagagaacccatatgctccccatattcaagagcagatcaccttg
accaacctgcgggtcaacttcacccatctgttcaccctgggtgacaccctactggggcgg
aagaagaggaaccctcaggagaagtactactatgccctgtacgaaatggtggtgcgcggc
agctgcttctgtaatggccatgccagcatgtgtatgcccgtggatggcacccggggtgac
gtcttaaatgagcctggcgtgattcacgggcgctgtgtatgccaacacaacactgtgggc
acaaactgtgagagatgccaggacttttacaacgatgtcccctggaggccggctggccaa
tctgacccacatgcctgcagaaggtgtaactgtcacggtcattcggagacatgtcacttc
gacatagaccagtaccaggccagtgggggggtcagcgggggggtgtgtgacggctgccga
cacgaccgcatgggtccccagtgtgaacgctgccgaccctatctctatcaagacccccag
ctctccatggaagaccctcggggctgtatctcatgtgactgtgacctgacggggtccctg
gataacggcctttgtgaccccgtgtcgggccgctgcgtgtgtaaggagaacgtggcaggg
gacaggtgtgatcgctgtaaatttggcttctacgggttcagccaggaggaccccactggc
tgccagaggtgcaggtgtaacttcctgggtagtgtcctgatcccctacccatgtgaccag
gtgacaggccagtgtatatgtcatcgcttcgccatgggacccctgtgtgaccaatgtctg
ccaggttactggggtctggggaacactgtacacacctgctcaccttgtgactgtgaccat
ggaggagcctacagcagcacgtgctcttcattggacggccagtgtcagtgcctgccaaac
atggtgggccggagctgtggtgatcctgccccgggacatttcctggctgctctagactac
tacctgtatgaggcagagaacgctgccccactggagggaaaaagctcctcccctctgttg
aaacccacagacctgcctgtgtgtgaggaatactacaaacagcagggctatgacatcaaa
tatcaaaatggccgcttggtcctgaccaggagaagcaaaagacaagccaggaggagaaga
cagggacagaggtccattcccctggacccaggctcagccctccagattgtgccccgggag
aggacaccagatgtaccaatcacttggaccggcccaggattcgtgcgggtcctggatggt
gctgggcttaggttcactgtggacaacctcccagcgtccctcgactaccatctagtcatc
cgctatgaaccagagtcgccagatgactggatggcctctgtgagcattgttccattattg
gctggtgacggaggttgtcccactagcccgaaaggggagaaaaccctcaccatacctggg
gctgccagggttgccattttggatacgcctgtgtgtctgaacgcgggaagaagatattat
gtggacatcacttttaggaagcagcccaactctaaccctcagtccagctcacataccctc
gtcgactcaatgggtctgatccctaagatggagtctgtgcaggacttctgttcacagagt
gagctggactcttttagaagattccgctgttttgagttggctgctgagcaggagaccctg
cctgatgtgtgttatggcctcattggaagcctgtcggctcgcatacacaacggtgccatg
ctttgcaggtgtaacatccagggttctcatggcccctactgcagtaaattcggagggctc
tgtgagtgcaaggccaacgtggttggccgctgctgtgactcctgcgcccccttgaacttc
ggcttcggacccaacggctgtgcaccctgtgagtgtgaccgtcgcggtgcagtggcagag
ctgtgtgaccaggtcagaggtcagtgtccgtgtcgtatggaggtgggcgggcgacgctgt
gatcgttgcctgtctgggtactacggcttcccactgtgtcggccctgtaagtgcaacggc
ctggctgaactgtgtgaccaggacactggagcctgcctggactgcagggagcactccacc
ggatacaattgtgagagctgtgtggagggttactttggtgacccagtctccagggagccc
tgtaagccttgtctgtgtcctgacactcagtccagtggacggttctttgccagcacctgc
aacaaggacccagagtctggtagcctgacttgtgactgcctggctggacacacaggtctc
cgctgcgatgcctgctccgctggtttctacggcggcctgaccgcgccgggcggcggcggc
tgcgaagagtgtctctgtaacaacaacatcgaccctgctgacagtgacgcgtgtgacagt
gtgacgggcgagtgtttgcgttgcctccacaacacccagggaccccgctgtcagagctgt
aagcctggctactatggagacgcactggcccaggactgcaaagagtgctcctgtgaccgg
cagggaacggatgtgacccagtgccctctgggcagcccgtgtttctgtgacccgctgacg
ggtcagtgcccgtgtcgggcgggcgcggtgggcacgctgtgtgacgagtgtgccaccggc
ttctggaacattcagggagagtccgggtgccaaccgtgcaaatgtgaccctgctaactcc
ttcaataaccactgtgacaaggtgactggtcattgccagtgtcatactgagtttggagga
agacagtgtgatgagtgtggggaaaatcactttgggaaccctgacctgcagtgtgtttcc
tgcgattgtaacatggagggtaccgaccgccccgcctgcaacccattgacgggtgagtgt
ctgtgccgcattggtgtgatgggcatcttctgtgatgagtgtgcccctgggtatgaccaa
gtcttccccgcctgcctcccgtgccacccctgtgccgtcctgtgggcggacaacgtcacc
gacgtccaccgtgccgcccagaggatgcgcaccttcatccctccccacggcgaacagctg
gagcctggacacagtcgtcagttgcaacgaatgctagagatgcactccaagctggactat
ctggggaacctgacagggagatctctacctcgggtgaaagacgtggagaagctgtgtgtc
ataatctcgaagctcaaagactccatagaccccaacgccatcatcgtggactcatcatct
cttctgaacactgagatcgacaacatccaccacgagttcaagatgctgttggataactta
aggaacaaaatcagcgaggctccaacactagatctaaaagaaatgcaggaggccctggag
aagatccggaagcagcatgcagacttcatggctgatgagaagaaggtgaaggaggccgag
agggccctggagaactccatggacacacggcaggaaatcaaagaccatctgtccagctgc
agcatcttgggagacatggaggggctggagaagaaggtcaaggctctgagtgtggccaaa
ctcaacaaaaacatctgtggaggcccaggcgatgaggaatgctccaaatcagagtgtggg
ggtgcgctgtgtcgagacttcctgggacagagagaatgtgggggtcctatgtgcaagggc
agcttccctgtgagccacaatgccacaaaaacagctgagcaagtagagaatgaccttatc
gacctgctccaaaaactaaaggactccaagatcaagatcaatgaggccaaacagatgacc
caaggcactcatgagcaggcaaaggagctacagaagaagatcactgacagcaaggagaag
tttaagagggagaagaatgacaccaaggacctcatcaatagggtcaaagactacctcaca
gatgagatggtggcgccagaggacatagagaatttggtcaaggttgttctggccatccag
ctgccgggctctccggacgacatccgctccatgatccagaacatccggggcgtgctgacc
aacttcattgatttcaaagaggatctgaaaaaactgaaggaccaagccaagacagcccag
gacctgcaggagaaggctcaggctatcagggacagaatcaggggtattgatgttacggat
ctcaagaaaaccatgacggacactgagaatacacaggacagggtcgagcaagacctggag
aaggctaaggaaagcaatggcgtgtcggacaagatgattaaagagattgagaagaaactg
aacaacatagagactaacttgaactctactagaactccagagatgctggaggagattgag
gttctgaagagcaagaccgagatgaacagagagcaggcggagcaggccaaagctgatgca
gatgcagccataggtgccactactgacgcagagaaggggcttgacaaggtgactgcgctg
tttgataggctaaagacgggaaacacaaaccagaccgataatgaagcggccaacgaacgc
ctgaagaacattactgtggaggcagagaaagtcgcaaaagacgtccaagataaaatgaaa
caaattgacgacttggagaaaaagatccaagacttcatcagaaacaaagaggacaaggcc
aaggaggttgccatgttgctggagatggtagaagccctccaaaaggagattgctgcgcgt
gtggatggttacattaactgtacctcctaa
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