KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112252636
Entry
112252636         CDS       T05605                                 
Name
(RefSeq) protein LSM14 homolog A isoform X1
  KO
K18749  protein LSM14
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112252636
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112252636
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 112252636
NCBI-ProteinID: XP_024279832
UniProt: A0A8C8M3J1
LinkDB
Position
LG06:complement(47302841..47332254)
AA seq 526 aa
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE
IFEYIIFRGSDIKDLTVCEPPKPTCSFPQDPAIVQSSVCSAPPPAPAATSAPFQSVGSNG
LFNRAPVPLYSQCNTSPLVSMQFGTVGDGKSHSNTKPGYGRSVTPSSFGSDTSSAATQSQ
SSAIGAALPTDSHSLGTATVLVSKGHTSPPLDPLRKSPTEQAAPSAPYAPTPSLGRRSPA
PGQTTPSAPAAGHAQQQHHHQGETVSGARSNQAWGVPCNAPISHQRYTTAGLTNSIFISV
VGGPPPQRRGRGGRQRGRGRFNVRRDGPMKFEKDFDFESANAQFDKEEIDREFQSKLKLK
DETEKAAVNVEDKGNSSVETQNSKGNADEGLEAPTLQVYYDKSKSFFDKVSCDYSRKAAE
KLGGSSGFPLQRRQTWAEERRINSETFGIPLRGGQARGGYRGRGGMGFRRGRSASRGSFG
PPRGSHGYRGGFNPTSQGGWEFSENFEYRDTGGCMEDRSRGVTAHL
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgagtggaggaaccccttatatcgggagcaaaatcagcctaatttctaaggccgagatt
cgttacgaagggattctctacactattgacactgagaattcgactgtagcacttgcaaaa
gttcggtcttttggcactgaggatcggcccactgataggcccatcccgccccgagatgag
atctttgagtacataatcttcagaggcagtgacatcaaggacctgactgtgtgtgagccg
ccaaagccaacatgctctttcccgcaggaccctgccatcgtccagtcctctgtgtgctca
gcccctccacctgctcctgctgccacttcagctccattccagtcggtgggctccaacggc
ctgttcaaccgagctcctgtgcccctgtacagccagtgtaacaccagccccctggtgtca
atgcagtttggcaccgttggtgacggtaagagccacagcaacacaaagcctggatatgga
agatcagtgacgccctcttcctttgggagcgacacaagctccgctgcaacccagtcccag
agcagtgctattggcgctgctctccccactgattcacactctctgggtaccgctactgtc
cttgtatctaaaggccacaccagcccccccctggaccccctgaggaagagccccacagaa
caggcagccccgtcggccccctacgctccgactcccagcttgggccgtaggagtcccgct
ccaggccaaacgaccccctcggctccagccgccggccatgcccagcagcagcaccatcac
cagggtgagaccgtcagtggggcccgcagtaaccaggcctggggtgtgccctgcaatgcg
cccatttctcaccaacgctataccactgcagggcttaccaactctatctttatctccgta
gttggcggccccccacctcagaggcgtggtcgtgggggaagacaacgcggcaggggccgc
ttcaacgtgcgccgagacggacccatgaagttcgagaaggacttcgactttgagagtgcc
aacgcccagttcgacaaggaagaaattgacagggagttccagagcaagctcaaactaaaa
gatgagacggagaaggcagcagtgaacgtggaggataagggtaactccagtgtggagact
cagaacagcaagggcaacgctgatgaagggctggaggcaccaacacttcaagtttactac
gacaagtcaaagtctttcttcgacaaagtctcctgtgattacagcaggaaagctgcagaa
aaacttggaggaagctctggtttcccactgcagcggaggcagacctgggctgaggagcgg
cgtatcaactctgagacgttcggcatccccctgcgtgggggtcaggcccgtgggggctac
cgcgggcgtggtggtatgggcttccgcaggggtcgctccgccagcagagggtccttcggt
cccccccgcggaagccacggctacaggggaggattcaatccaacaagccagggaggatgg
gagttttcagagaactttgagtacagggataccggtggctgcatggaggacagatccaga
ggggtgacggctcatctttag

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