Oncorhynchus tshawytscha (Chinook salmon): 112252673
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Entry
112252673 CDS
T05605
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SAM_2
Ank_5
Ank_3
SH3_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
112252673
NCBI-ProteinID:
XP_042179276
LinkDB
All DBs
Position
LG06:50355813..50483062
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AA seq
1854 aa
AA seq
DB search
MPRSPTSSEEEMAQSVSDGSGGFETDSSKEEAGHGGPGGERASRRTDRRAEKDKAARRES
LVFCVVIPDLQQSTCMRFKPEATVWVAKQQILCTLTQTLRDVLNYGLFQPAVEGRKSGFL
DEERPLKDYPTPASIKGVPTLEFRYKSRVYQQPNVNEKQIAKIHTQANYRKFMDHIQHLQ
LDKVVKMLEKGLDPNYQDPDTGETPLTFAAHLYNVEQVIVVLKQGGAHLDFRSQDGMTAL
HHAVRAKNQATLKALLDLGASPDYKDSQSLTPLYHTVLVEGDPSCCELLLRAHATVSCHD
ENGWHEIHQACRYGHVQHLEHLLFYGADMGVQNASGNTALHICALYNQEHCARVLLVRGA
NKEVKNYRSQTSFQVAIIAGNFELAEFIKNHKETDIVPFREAPAQPARRKQAPRSTLAAP
RPTLLRSNSDNNLNVNNRSPLPSPSHSPLRSLSPRRPQQQQMPSPNGTVRTMGKGAPRPP
RSPSLGRLGEEARRQTPQRQPSPHRGREAFSDGIDSQGPKRKLYSAVPGKHYVVTQSYQP
QAEGEIPLYKNDKVKVLSIGESGFWEGSARGNLGWFPAECVEENIPNQVQEEKPYARADR
AERRKLFRHYTVGSYDSFDASSDCVIDEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPT
PAFPALQYLESVDEGGVAWRAGLRNGDFLIEVNQENVVKVGHKQVVNTIRHGGNRLIIKV
VTVSRNLDPDDTARKKVPTPPRRAPSTALSMAMRSKSMTSELEELATLRKKVTGDKVDEN
MPPQKPMWENSNADVRVANTVKSRPNSRCFAMSPEINSMCESQDMSMQTQTQPREPSSPR
GRGPYLGVPNRQGTMRRQKSIGTSGITEEETPQFLTPPMLKFTRSLSMPDTSEDIPPPPA
ISPPSPPYNNVPNPQGRGYGIIRHSAPKGTAPERGDLTAGGSDGWREQGGMYYREPQSEQ
YQSEDHHHQQGSHSPGQGLTAQQSFLNRRAQIPENPYSDLGKMGNLGLFAPNKPQRRKGM
LVKQDKIEDSPEKICTIKIPTIIIKEPSTSSSGKSSQGSSMEIETGAHDHPGQLRPDDGH
NPSSPFATAMAGAVRERERRMVESHQNSPSYRFTDQGDEDSPPAPTPRLRHSKSIDEGMF
SSDERLRRIMAPPASLLNIPRGGGNVTNFNTSEPNMVREPLHTRTGHHSPVSLPNKTYTS
SSGHYVHPVTGKPLDPNSPLALALAARDRAMREQSQPLPLKTELPKPDLNKPLFIDTKLR
TGMDASFSATATMGRPGRAGLRRQMTEAKYETESKYDHPLAKDQDKSLSRPEREEEKKNM
LIDNVDTSQQKSAGLLMVHTTDGARSEENSLSEGDRDGAVSPDSTPSELRDPNQPNTSKM
SSPNPHNSHSMGPGPRGSKTMITVTSVDEPVKLPFGIPPPPCVPSVDIDDDFFADPLPPP
LEFANSFDIPEDQKGAIAELLKQHRNAGRAPSSLAPFYPHHGNTPSHPDQTMIKRPAVLT
NCMPPSFTPNALESYEPISDSGIDVEPDSRSSGDPQMETTSTVSTVSSISTLSSDGGEML
DNTCTVYADGQAFLVDRTSKPKNRQPVANKSNALYKDPALMDREENLRTFGTPSSVPPPP
PGACVHSEPPRTPTQRTSKLWGDPPGSNPYDMQNKDKTPKPGDGIDSSSSGCRTVFGSRG
PDGGSLASGTQRNTTVTFAAQLGPSVSAPSPKRETESLPHHRAPSPILSPPDSGLGCASS
LPATSPTLSDVFGLPTPPLSLGTGSSRSPSPLTLMQAVSNKPFATKPVLMWSKHDVADWL
ESLNLAEHRDTFMDNDIEGSHLPSLQKDDLIDLGVTRVGHRMNIERALKLLMDR
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggagtcctacgtccagtgaggaagaaatggcccagagtgtctctgacgggtct
ggaggttttgagacagacagctccaaggaggaggctggccatggaggacctggaggggaa
agggccagcagaaggaccgacaggagagcagagaaggataaggccgcccgcagggagtca
ctggtcttctgtgtggtcatccctgacctgcagcagtctacatgtatgaggtttaaaccc
gaggccaccgtatgggttgctaaacagcagatcctgtgtacactgacccagacgttgagg
gacgtgctgaactatggcctgtttcagcccgccgtggagggccgcaagtctggcttcctg
gacgaagagcgccccctcaaagactaccctacacccgccagcatcaagggggttccaact
ctggagttccgttacaagagcagggtctaccagcagcccaatgtaaacgaaaagcagatt
gccaaaatccacacgcaggccaactataggaaattcatggaccacattcagcatctccag
ctggataaagtggtaaagatgctggagaaaggcctcgaccccaactatcaagaccctgat
actggtgaaactccactgaccttcgcagcccacctttacaatgtggagcaggtcatcgtt
gtattgaaacaaggtggagcacatctggacttcagatcacaagatgggatgaccgctctc
caccatgcggtcagggccaagaatcaggccacgctgaaggctctactggacctgggcgca
tctccagactacaaggacagccagagtctcacccccctctaccatacagtcttggtggag
ggagacccaagctgctgtgagctgctactgagggcccacgccaccgtctcttgccatgac
gagaatggctggcacgagatacaccaggcatgtagatatggacatgtccagcacctggag
cacctgttgttctacggagcagacatgggtgtccagaacgcctcgggaaacacggctcta
cacatctgtgctctatacaatcaggaacactgtgccagagtactgcttgttcgtggtgcc
aacaaggaagtgaagaactacagaagccagacatcattccaggtggccatcatcgcgggg
aactttgaattggcagaattcatcaagaatcacaaagagactgatattgtgcctttccgt
gaggcgccggcccaacctgcccggcgcaagcaagccccacggagcaccctcgctgcacca
cggccgacgctcttgcgctccaacagcgacaacaacctgaacgtgaacaaccgatcaccc
ctgccgtccccgagccactctcccctgcgtagcctctccccccgccggccccagcagcag
cagatgcccagccccaatggaacagtcaggaccatggggaagggggctccccgccctccc
cgctcaccttccctggggcgcctgggggaggaagcacggagacagacccctcagcgacag
cccagcccacacaggggtcgggaagctttctctgatggcatagacagccaggggcccaag
cgtaagctgtacagtgctgtgccaggcaagcactatgtggtgacccagtcctaccaacca
caggccgaaggagagatccccctgtacaagaacgacaaggtcaaagtgctctccataggg
gaaagtggtttctgggagggcagtgcccgtggtaacttggggtggttcccagcagagtgt
gtggaggagaacatccctaaccaagtccaggaggagaaaccatatgccagggcagacaga
gctgagaggaggaagctcttcaggcactacactgtgggatcctacgacagctttgatgcg
tcaagcgactgtgttattgacgagaagacggtagttctacagaagaaggataatgaggga
ttcgggtttgtgctgcgaggggcgaaagcggacacgcctatcgaggagtttactcccacc
cctgccttccctgccttgcagtacttggagtctgtggacgagggaggtgttgcgtggcgg
gcggggcttcgcaacggagacttcctcatcgaggtgaaccaggaaaatgtggtgaaggtg
ggccacaaacaggtggtcaatacgatccgacacgggggaaaccggctcatcatcaaagtg
gtgacggttagcaggaatctggaccctgatgacacggctaggaagaaagtgcccacacct
ccgcgtagggctccctccactgccctgtccatggccatgcgctccaaatccatgacatca
gagctggaggagcttgccactttgaggaaaaaagtgaccggtgataaagtggacgagaac
atgcctcctcagaagcctatgtgggagaactccaatgctgacgtaagggtcgctaacaca
gtcaagtcacggcccaacagcaggtgcttcgccatgagccccgagattaattccatgtgt
gagagccaggatatgtcgatgcagacccagacccaacccagagagccaagcagtcccaga
ggtcgaggaccctacctgggtgtgccaaacagacaggggaccatgagacgacagaagtcc
ataggaacatctggaataacagaagaggagacccctcagtttctgacccctcccatgttg
aaattcaccaggagcctctccatgccggacacatcagaggacatcccacccccacccgcc
atctcccctccatctcccccttacaacaacgtccccaacccccagggcagaggctacggc
atcatcagacactctgctcctaaaggcaccgccccagagcgaggggacctcacagcgggc
ggcagcgatgggtggagggagcaggggggtatgtactacagagagccccagtcggaacag
taccagtctgaggaccaccaccaccaacagggaagccacagcccaggccagggcctcaca
gcccagcagagcttcctgaaccgcagggcccagatccctgagaacccctactcagacctg
gggaagatgggcaacctggggctgtttgcccccaacaagccccagaggaggaagggcatg
ctggtgaagcaggacaagatcgaggacagccctgagaagatctgcaccatcaaaatccca
accatcatcatcaaggagccgtctacatccagcagtggtaagagcagccagggcagcagc
atggagatagaaactggcgcccacgaccacccgggacagctccggcccgacgacggacac
aaccccagcagcccctttgccacggctatggcgggcgccgtgcgagagcgcgagaggagg
atggtggagtctcaccagaactccccatcctacaggttcaccgaccagggtgacgaagac
tcacctcccgccccaacccctcgcctccgccactccaagtccatcgacgaggggatgttc
agtagtgatgaacgcctgcgccgcatcatggccccacctgcctctctcctcaacatcccc
agaggaggaggcaatgtgacgaacttcaatacctcagagcccaacatggtgagggagcca
ctccacacccgcacgggtcaccacagcccggtcagtctgccaaacaagacctacacctcc
agcagcggacactacgtccacccagtaactggaaagcctctggaccccaactcccctctt
gcactggctctagctgcacgggaccgggccatgagagagcagtcccagcctctcccactg
aagactgagctacccaaacctgacctgaacaagcctctgttcatcgacaccaagctaagg
actggcatggatgcgagtttctccgcgacggccaccatgggtcgaccaggcagggcaggg
cttcgcaggcagatgaccgaggccaagtacgagacagagtccaaatacgaccacccgctg
gctaaagaccaggacaagagtctatcccggcctgagagagaagaggagaagaagaacatg
ttgatagacaacgtggacacgtctcagcagaagtctgctggtctgctgatggttcacacc
actgacggagccaggtctgaggagaacagcctgtctgagggggacagggacggggcagtg
agtccggacagcacccccagcgagctccgggatcccaaccagcctaacacctccaaaatg
tcctcccctaacccccataactcccactctatgggccctggtcccagaggtagtaagacc
atgatcaccgtcacctcagtagatgagccggtcaaactccccttcggcatcccccctccg
ccctgcgttccctctgttgacatcgacgatgacttcttcgctgacccactgccaccgccg
ctggagttcgccaacagcttcgacatcccagaggaccagaagggggcgatcgctgaactg
ctcaaacagcatcgaaacgctggcagagccccatcgtctctagctcccttctacccccat
cacggtaacaccccaagccaccctgaccagacaatgatcaaacggcctgcagtgctcact
aactgtatgccccccagcttcacccccaacgccctggagagctacgagcctatcagtgac
tctgggatcgatgtggagcccgacagccgcagtagtggagaccctcaaatggagactacg
agcactgtatccactgtgtccagtatctctacgctgtcgtcagacggtggcgagatgctg
gacaacacttgcacagtctatgcagacggacaggcctttttggtggaccggacctcaaag
ccaaaaaacaggcaacctgtcgccaacaagagtaatgcactttacaaggaccccgccttg
atggatagagaagagaacctgagaactttcggaacgccctcctctgtcccgccacctccc
cccggggcatgcgtccactcagagccccccagaacaccaacgcaaaggacctcaaagctg
tggggagacccgccaggctctaacccctatgacatgcagaacaaggacaagacaccaaag
ccaggggatgggatagactcttcttcctcaggatgtaggaccgtttttggatcaaggggt
ccagacggtgggtcccttgcctcaggtacacagcggaataccacagtcacttttgctgcc
cagctcggcccgagcgtgtcggccccatctccaaaacgagagacagagagtctcccccac
caccgagcccccagccccatcctctctcctccagactcaggcctcggctgtgcctcctcc
ctccctgcaacctcccccaccctctcggatgtgttcggcctgcccaccccccctctcagc
ctgggcacggggagcagccgctcaccctcccctctcactctcatgcaggccgtctccaac
aagccttttgccaccaagccggttctgatgtggagcaagcacgatgtggccgactggttg
gagagcctaaacctggcagagcacagagacaccttcatggacaacgacatcgagggctcc
catctgcccagcctgcagaaggacgacctcatagatctcggggtgaccagagtcggccat
cggatgaacatagagagagctttgaaactgctgatggacagatga
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