Oncorhynchus tshawytscha (Chinook salmon): 112252676
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Entry
112252676 CDS
T05605
Name
(RefSeq) sorbin and SH3 domain-containing protein 1-like
KO
K06086
sorbin and SH3 domain containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
otw04520
Adherens junction
otw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112252676
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112252676
03320 PPAR signaling pathway
112252676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112252676
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
112252676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Sorb
DUF4122
Motif
Other DBs
NCBI-GeneID:
112252676
NCBI-ProteinID:
XP_042184084
LinkDB
All DBs
Position
LG01:complement(50469351..50524986)
Genome browser
AA seq
1575 aa
AA seq
DB search
MKGSPDLIPAAELDPTRVCKGKGVVTLRATLVHIDDEDCVSKESNVETAPSSWIGQINGD
SSLTGLAEGCFHDITADLPTVNRTQPQGSSPVSTEERQFLAFDIQNHITSTKAPSAYPST
TKTVNPTIVLLQHNRDPTPERDKLSDPGPVVGAEREQSQHPDMDGKRMRFSQSPVLGPLN
QPNLPVRNTEKSKDWYKNMFKQIHRIPEPVEENPYRPTYIFPEFYDPRQMKTTDDGPSPY
GFVEDVKGVPRSKSAAEVDHRLSMPVPTRSSSLKPSKRNEWEPPDKKVDTRKYRAEPKSI
FEYEPGKSSVLKLERKTQDISPEDVHLENEPWYRFFSEMDFDEATKERPSVRDTSSLAEP
SDSPLPAWAPLTDARPPSLPLVFSNLQACQNTRLLLHVKASFSRANNPRLWRHFRQTHEK
EKREPVTTANAPASILVGRDLPVDLSMTSLFGLLQSAPSFSPLETPAELQQYSGCKAGHS
EVEKDEGSSSGEPAAPECDRHVYKSVLEGGDIPLQGLRAINKRHASTSSKVDYQGGNGYI
ISPCSSVNSRSVLASNALGYQCKNKKPLSAAKACIPQILPSKFKPKLIPPSVDSQDRRTA
PARHPKAHSCEDIYTGSTGAEAQESGLNSNTHKNSNGLPLDSEAGLNNGSPATRRSTSEF
STLYRNMHSIQRPSCSVGSSPHGSVRSLTSLFEKVGVNGTDGEGDEAGENIPRRDAVSSR
VSEFELIIQRSSPSPTRSSSMPTLPTGQSLTHNHSPADLFMASAVSAESLMVTVPGHTGQ
TEGCPLEDTDGKAARDKAFLSGSEMVGSSEYSDTLRAESLSGTESETEQHGPTEKAPVPT
EKAPVPTEKPPKVTISRTSNSPPAPVTPSASPHNHHHHKPSSKCKGSCPASYTRFTTIRR
HERQQQATAQQDKLSTQEKIKNSSSLPSNLFLMGPAPFKVKRPLRSHQAKKTLSATKVMT
GQMSQTNVYDPRPLIPPRLSSLELLEKLGNGEGAPSDSDNNLTNRGVLDANGNLLQPLAA
HRRDSESLTQGDLGDGLDEVVRRRHGDKEKILEEQRRLKREQEEADTASRRHTGIVPTHH
QFITNERFGDLLNININDADKRKSGSERTPALARFDFRAETLKELPFQKGDIVYIIRQVD
NNWFEGEHHGRVGIFPRSYVELLPPTEKAQPKKSAPVQVLEYGEAIARFNFTGDTVVEMS
FRKGERIILIRRVDENWYEGKVSGTNRQGIFPVTYIEVHKRPRVKNGLDYPDPPIGQSPH
RSLNASPQLNRVRNNRLTTSPLPLPRSPRRSVSPEVHAISSEWISLTIGGASPPLPPPLL
YPRSLCVLPLGRVPAPSKSASPVPPSAAAPIASPPWPPPPPPPAPALPAPPWLGHPFPHL
HPAPGGGLPAFPSLSSSVPQPEPLWRGGPGELVDRGQPLEHPGEGFDGGGGGRGRQGHWP
RSPGQLAKYTLLEMNCIFQTSPTGYTLLLKNDSDYHGRTSRSPVMLFDIQDNNMNANSFT
QPQSHSSSPEPSRLSCGIFQALYSYVPQNEDELELQEGDLVSVMEKCDDGWFVGTSKRTK
QFGTFPGNYVKEVNL
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggctctcctgacctaattccggctgcagagctggaccctacaagggtgtgtaaa
gggaagggggtcgtgactctgagggccactctggtccacatagacgacgaggactgcgtc
agtaaagaatccaacgtcgaaacagcaccaagtagttggatcggccagatcaatggagac
agctctctaacaggattggctgagggatgcttccatgacatcacagctgatttacctaca
gtcaacagaactcaaccccagggaagttctcctgtgagcacagaagaacgccagtttctt
gcctttgacattcagaaccatattacatcgacaaaggctccctctgcctacccatccacc
accaaaacggtcaacccaaccatagttctgctacaacacaacagagaccccaccccagag
agggacaaattgtctgatccaggacctgtagttggggcagagagagaacagagccaacac
ccagatatggacggcaagaggatgaggttctcacaatcccctgtcttgggcccattgaac
cagcccaacctgccagtacggaacacagagaagtccaaggactggtacaagaacatgttt
aaacaaatacaccgaattccagaacctgttgaggaaaacccataccgccccacctacata
ttccctgaattctatgatcctagacagatgaaaaccacagatgatggtccctccccctac
ggttttgtggaagatgtgaaaggggtcccacggtcaaaaagtgctgctgaagttgaccat
aggttgtctatgcctgtgccaacccggtcctcctccctcaaaccttccaaaaggaacgag
tgggagccccctgacaaaaaggtagacaccaggaagtaccgtgccgagcccaaaagcatc
ttcgagtacgagccgggaaaatcatcggtgctgaaactggagagaaagactcaggacata
agtccagaagatgtacatttagagaatgagccttggtatagattcttttcagagatggat
tttgatgaagcgacaaaagagaggccctctgtgagggacaccagctcattggctgagccc
agtgacagccccctccccgcatgggcgcccctgaccgatgcacgccccccctcactgccg
cttgttttctccaacttgcaagcgtgccaaaacacacgcttgctcctccatgtaaaagct
tcgttcagcagagctaacaatcccaggctttggagacacttcagacagacacacgagaaa
gagaaaagagagccagtcaccacagctaatgctcctgcttctattctagttggaagagac
cttcctgtggatttatcaatgacttctttgtttggtctgttgcagagtgccccctctttt
agccccctggaaacacccgccgaactacagcagtactccggttgtaaggccggacacagc
gaggtggagaaggacgaaggatcatccagcggcgagccagcagccccagaatgtgaccgc
catgtttacaagagcgtcctggagggcggcgacattcccctgcaaggtctgcgggccatc
aacaagcgccatgccagcacctcctccaaagtggattatcaaggtgggaatggctatata
atttcaccatgctcttctgtaaatagtcgatcagttcttgccagtaatgccctaggttac
cagtgtaagaataagaagcccttatctgctgccaaagcctgcataccccaaatcctcccc
tctaagttcaaacctaagctgataccccctagtgttgacagccaggacaggaggactgcg
cctgccaggcacccaaaggcacacagctgtgaggatatatacacagggagcacaggcgca
gaggcccaggagagcggactaaactcaaacacacacaaaaactctaatggtctccccctt
gactctgaggctggtttaaataatggcagccctgcgactagaaggagcacatctgagttc
tccaccctgtaccggaacatgcacagcatccagaggccatcctgctcagtgggctccagc
ccccacgggagtgtccgtagcctgacctccctgttcgagaaggtgggggtcaatggaact
gatggggagggagatgaggcaggggagaacattcccaggcgggacgccgtgtcgtcgcgg
gtgtcagagtttgaactgatcatccagcgctccagcccgtctcccacacgctcctcctcc
atgccaacactacccacaggccagagcctcacccacaaccacagccccgccgacctcttc
atggcgtccgctgtctcggctgagtcgctgatggtcactgtcccagggcacactgggcag
acagagggctgccctctcgaggacacagacggcaaggcagcccgagacaaggcgtttctg
tcaggcagcgagatggtgggatcctctgagtacagtgacacactgagagccgagtccctc
tctgggactgagtctgagacagagcagcacggccccacagagaaagccccagtaccaaca
gagaaagccccagtaccaacagagaaacccccaaaggtcactatctccagaacctcaaac
agtcccccagcaccagtcaccccgtccgcttccccacacaaccaccaccaccataaaccc
agcagcaagtgcaaaggctcctgccctgcctcctatacccgcttcaccactatccggcgg
cacgagaggcagcagcaggctacggcccagcaggacaaactgtctacccaggagaaaata
aagaactcctcctctctcccctcaaacctcttcctcatgggccctgcaccgttcaaggtg
aagaggcctctccggtctcaccaggccaaaaagactctctcagccactaaggtgatgaca
ggtcaaatgtcacagacaaatgtctatgatcccaggcccctcattccaccgcgcctctct
tccttggagttgctggagaagctgggcaacggggaaggtgcaccgtccgacagtgacaac
aacctgactaataggggagtcttggacgccaatgggaatcttctgcagccgctagcagct
caccgcagagattcagagtccttgacccaaggagaccttggtgacggcctggatgaggtg
gtcaggagacgccatggagataaagagaaaattttggaagagcaacggcggctgaagagg
gagcaggaggaggctgacacagcatcgaggcgacacacgggaattgttcccacccaccat
cagttcatcactaacgaacgtttcggagacctgctcaacatcaacatcaatgacgcagac
aagaggaaatccgggtcagagagaactccagccctggctcggtttgacttcagagcggag
actctaaaggagttaccatttcaaaagggagacattgtgtacatcattcgacaggtggat
aataattggtttgaaggggagcatcacggcagagtcggcatcttcccgcggagttatgtt
gagctccttccccccacggagaaggcccagccaaagaagagtgccccagtgcaggtgctg
gagtatggagaggccattgcacgcttcaactttacaggggacacggtggtggagatgtca
ttcagaaagggagagaggatcatcctgattcgcagggtcgatgagaactggtacgagggc
aaagtctctggcaccaatcgccagggtatattcccagtcacctacatagaggtgcacaaa
cgacccagagtaaagaatggattggattacccagacccccccattggccaatcacctcac
cgcagcctcaatgcttcccctcagctgaaccgtgtccgtaacaaccggctcaccacatcc
cccctgcccctcccccgctccccccgccgctctgtgtcccccgaggtccatgccatctcc
tctgagtggatctccctgaccatagggggtgccagccccccactgcccccacccctcctc
tacccccgctccctctgtgtcttaccgctggggcgagtacctgccccctccaagtctgcc
agccctgtgcccccatctgcggcagcccctattgcatctcccccatggcctccccctccg
cctccccctgcccccgccctacccgccccgccctggctcggccacccctttcctcacctt
caccccgccccagggggaggacttcctgctttcccctccctctcctcgtctgtcccgcag
cctgagcccctgtggaggggcgggcctggagagctggttgacaggggccagccccttgag
catcctggagagggatttgatggagggggagggggcagagggagacaggggcactggccg
cgaagccctgggcagctggcgaaatacacgctgttggaaatgaattgcatcttccagaca
tcacccactgggtacacactgctgctgaagaatgacagtgactaccatggaagaacctcc
agaagccctgtcatgttgtttgacatccaggacaacaacatgaatgctaactcattcacg
caaccccagtcccacagcagcagcccggagccaagccgtctcagctgtggaattttccag
gctttgtacagttatgtgccacagaatgaagatgagctggagctgcaggagggagatctt
gtcagtgtcatggagaagtgcgatgatggctggtttgttggtacctcgaagaggacaaaa
cagtttggcacgtttccaggaaattatgtaaaagaggtcaacttataa
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