Oncorhynchus tshawytscha (Chinook salmon): 112252737
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Entry
112252737 CDS
T05605
Symbol
wdr11
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252737 (wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112252737 (wdr11)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112252737 (wdr11)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Other cilium assembly proteins
112252737 (wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
RAB3GAP2_N
Nup160
Motif
Other DBs
NCBI-GeneID:
112252737
NCBI-ProteinID:
XP_024280015
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Position
LG06:56366662..56528916
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AA seq
1242 aa
AA seq
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MIPYSVNIKLAARTLTGTLNLQNKTAVDWGWQGLIAQGCHSSILIIDPKTSQTIQVLERH
KANVVKVKWSRENYHHSLSSPYSLRLASADSAGKIIVWDVVSGTAHCEIQEHSKPIQDMD
WLWTQDASRDLLLAIHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNLALLTSE
GIVFISDFSHSKPPGSGGKKVYIASPHASPAHTKPVPAALPAPTGAKKALNKVKVLITNE
KPTAEAVTLNADCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVAIERSGVPFIQV
IPCAQRDALFCLHENGCITLRVCRSTTAPDESVAASDPEQSVQELVYDLRSQCDAIRVTK
TVRPYRMVICPVNENNAALAVSDGRVMLWELKAHVSKPTVNPSSGLSPLYAPVAFCGSPL
GQNQKKIQDLSLNTMIGQSLVSGADPPPPSLQQEVQLKFLLTGLLSGLPLPPFALRMCPP
LTTKNINHYQPLLAVGTSNGSVLVYNLTSGLLHKDLSVHSCEVKGIEWVSLTSFLSFATS
TPNNAGLVRNELQHVDLPTGRCFAFRGEQGNDEPAIEMMKVSHLKQYLVVVFRDKPLELW
DVRTGTLLREMAKNFPTVTALEWSPSHNLKSLKKKQLLAREAMARYTTLSDTEQSSVESS
VISLLQDAESKSEGGGQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIA
CIAWKGDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGA
EVWDTKEVNMVSSLRIGRNVNYRILDIDWCTSDKVVLASEDGCIRVLEMAMKSASYRMDE
QDLTDPVWCPYLLLPRAALTLKAFLLLQPWSGTFTMDITQVDYTEKHEIKGLIQEQLNSM
SNDMKSVLLDPELNLLQRCLLVSRLFGDESDLQFWTVAAHYLQSFAQARHLSVPVPEGQT
PAEGTQATPQGHLDIYHDTLCESFYFQRFQLERVHLQEVKRSSYEHTKKCADQLLLLGQT
DRAVQLLLETSADNPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLL
CLIDKAADACRYLQTYGEWNRAAWLAKVRLNPAESSDVLKRWAEHLCSPQVNQKSKAILV
LLSLGCFHKVGEMLQSMRYFDRAALFIEACLKYGVMEANDSTNKLIGAAFVDYARLLRTL
GLRESAAFWASRAGGAGEQLLEELFQGEGAVPEETEGLENTE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgattccttactctgtcaatattaaacttgcggcgcggacattgactggaacgcttaat
ttgcagaacaaaactgctgttgactggggttggcaggggctgatagcccagggatgtcac
tccagcatcctcatcatcgacccaaagacttcccagaccatccaggttctggagcggcac
aaagccaatgtggtcaaggtgaaatggtccagggagaactaccaccacagcctgagctcg
ccctactccctgaggctggcctctgccgattcagcagggaagattatcgtgtgggatgtg
gtgagtggcacggcccactgtgagatccaggagcactccaaacctatccaggatatggac
tggttgtggactcaggatgcttcacgtgatcttctcctggccatccatccacctaactac
atagtcctatggaacggagacacagggaccaagctgtggaagaagagctatgcagagaac
atcctctccttctcttttgacccgttcgatccatccaacctagcattgctgaccagcgaa
ggcattgtcttcatctccgacttctctcactccaaacccccgggcagcgggggtaagaag
gtctatatcgccagcccccatgccagccctgcccacactaagcctgtgcctgctgccctc
cctgcccctaccggtgccaagaaggccctgaacaaggtcaaagtgctcatcaccaacgag
aagccaacagcggaggctgtgaccctgaatgcagactgcctgcagctgtcctacctgccc
tccaagaggaaccacatgctgctgctctaccccagagagatcctcatcctggaccttgag
ctcagccagaccgtgggtgtggtggccattgaacgctccggggttcccttcattcaggtg
atcccctgtgcccaaagagacgctctcttctgtctccacgagaacggctgcatcactctg
agggtgtgtcgctccaccactgcacccgacgaatcagtagctgcgtcagatccagagcag
agtgtccaggagctggtgtatgacctgcgttcccagtgtgatgccatcagggtcaccaag
accgtgcgaccttaccgcatggtcatctgtccggtcaatgagaacaacgccgccctggcg
gtcagcgacggccgtgtcatgctgtgggagctcaaagcccacgtgtccaagcctacggtc
aaccctagctcgggtttgtccccactctacgctcctgtggcattctgtggttcaccactg
ggtcagaaccagaagaagattcaggacctgtctcttaacaccatgatcggtcagagtttg
gtttcaggagcagacccaccacccccatcactgcagcaggaggtacagctgaagttccta
ttgacggggctactgtcggggcttcccctgccccccttcgccctgaggatgtgcccccca
ctgaccaccaagaacatcaaccactaccagcccctactggctgtgggtaccagtaatggg
tcagttctggtctataacctcaccagcggtcttctgcacaaggacctgagtgtccactcc
tgtgaagtcaaaggcatagaatgggtcagtctcaccagcttcctctcctttgccacttca
acccccaacaatgctggactggtgaggaatgagcttcagcacgtcgaccttcccactggc
aggtgctttgcattccgaggcgaacaggggaatgacgagcctgccattgagatgatgaaa
gtgtctcatctgaagcagtacctggtggtggtgttcagagacaagcctctggagctgtgg
gacgtcaggaccggcaccctgctacgagagatggccaagaacttccccactgtcactgca
ctggagtggtccccctcccacaacctgaagagtctgaagaagaaacaattgttagcacgg
gaggccatggccagatataccactctgtctgacaccgagcagagcagcgtggagtcctcc
gttatcagtcttctgcaggatgcagaaagtaaatcggagggaggaggccaggccatctca
gcgagggaacactttgtgttcacagacacagacggacaggtgtaccacatcactgtcgag
gggaataccgtcaaagacggtgcccgcattcccccagacggcagtatgggtagcattgcg
tgcatcgcctggaagggagacactctggttctcggtgatgtggacgggaacctcaacttc
tgggacctcaaggcccgtctctccagggggatccctactcaccgtggttgggtgaagaag
atccgtttcgcacctgggaaagggaaccagaagctactggtcatgtacacagatggggca
gaagtctgggacaccaaagaggtgaacatggtaagcagcctgcggattggtcggaatgtg
aactatcgtatcctggacatcgactggtgcacctctgacaaggtggtgttagcctctgag
gacggctgcatccgtgtgctggagatggctatgaagtctgccagctacaggatggatgaa
caagacctgaccgatcctgtgtggtgtccatacctgctgctcccccgtgctgccctcacc
ctgaaggccttcctcctgctgcagccctggtctggcacattcaccatggacatcacacaa
gtggattacactgaaaaacatgagattaagggcctgatccaggaacagctcaactccatg
tccaatgacatgaaaagcgtcttgctggatcccgagctcaacctgctacaacgctgcctc
ctggtgtctcggctgtttggggacgagtcagacctgcagttctggacggtggcagcccac
tacctccagtcgttcgcccaggctcgccacctcagtgtgcccgtccccgagggccagacc
ccagccgaggggacccaggccaccccacagggccacctggacatctaccacgacaccctg
tgtgagagcttctacttccagaggttccagttggagcgagtccatctacaggaggtgaag
aggtccagttatgaacacaccaagaagtgtgctgaccagctcctcctgctgggacagacg
gaccgtgcggtgcagttgctgttggagactagtgctgacaaccccagttactactgtgac
tcactgaaggcatgtctggtgaccaccatcacctcctcagggccctcccagagcaccatc
aaactagtggccaccaacatgatcgccaacggcaaactggcagagggagtgcaactgctg
tgtttgattgacaaggctgcggacgcatgccgatacctgcagacctatggggagtggaac
cgcgctgcctggctggctaaggtgcgtctgaacccggcagagagctcagacgtgctaaag
cgttgggcagagcacctctgctccccccaggtcaaccagaagtctaaggccatcctagtg
ctgctatccttgggctgcttccataaagtgggagagatgctacaaagcatgaggtacttt
gaccgtgcggcgctcttcattgaagcctgtctgaagtacggagtgatggaggccaacgat
tccaccaataagctgatcggggctgcgttcgtggactacgcccgactactgcgcaccctg
ggcctgagggagagcgccgcgttctgggcatcgcgggcagggggtgccggagagcaactg
ctggaagaactcttccaaggagagggggcagtgcccgaggaaacggagggcctggagaac
acagagtga
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