Oncorhynchus tshawytscha (Chinook salmon): 112252768
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Entry
112252768 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112252768
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
112252768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Topo-V_HhH_2_2nd
Motif
Other DBs
NCBI-GeneID:
112252768
NCBI-ProteinID:
XP_024280106
LinkDB
All DBs
Position
LG06:58752503..58788988
Genome browser
AA seq
1385 aa
AA seq
DB search
MAARWGAGEAMLTACNMDFFSTNTLDEAVILHGGLSSDSLGLETGETLEALCCLDPSILS
IFEDTTTGENKVGLDEDNEATLLTALTEILDNVDNENLSPFDTLPDSDLLTGQKGREHSP
LRRLLCLSHSSPESETPCNTRQFSTGKSLPRTQESVQRSDGEEEEDAEACSPSLSPDRQP
SSPEQELLTWGGLSLPLEQHMDGESMSVSLGELVRHMHPYCMAVCVEDEGEERLLAEEGI
LLEVVEHGEHGETIFAIPDMGIPYAHLSLSLPGVEDSFKAEQRVPDEIGADMLETPESES
ANVVVDDDAAKVAGPSDPAETLRAKASGENVIYRRPKEETVERCLSRRKKKRKNKVKRSP
AEVTPEPAQAEGRVLRSASHRGAAQVSSPRKPIKETTRPEKKDKETFSSAISMAAPEAPK
QKTRATHTGETQHIQRQSHVEVTTLTLSTHPSVKVIPASDHVLKVMASDLLPVTMTPKKL
QTTTGCEKPQSLLASAANPTAPQAMTINPAAPQALTPSERPVSVAPQAIMQSNSASLAAP
QVIPKPIKASQAIEPKPKPLSLQQYRLLRQQKKPAPLERPEDQSTKWPSLPDAPTELPPI
PCLPIPSSKDPRRPHPSPGKTEVEVKVAWQPMGPGAPPTPEALLVPPAYMLASKSSSPSK
ASSANASPITPPQQATVPIQQPAKARQSPISVVPSSSTVSVVPPPPQNPFVKRNIPQAPH
PALNPLLQSQLPSKTVVLIKSQSSSGASTKTTTAADRPALIATIAQKPTPVAGALLEKMF
NCTTNAAAVSVQKPTPAAPLKVATTLQKGVVTLPRPKMPDLLTVTPGSTPAKPSTTQSSK
PAVRCTTAQEAPKAKSPTQELIEAFTSEIGIEAADFNSLLEQFEETQAKEEQYVLEVSGR
AAAVGNSSVERPCDRTVVERVGAHDLASTAGLTPPATPPHQMWKPLVPVALLGKNRVAET
PKPSPSKAIQINARPLPANKLRSKPPSPPITPTNTVALTLAFSDHDYCLPQKEPVAIAEE
PGKRWNVKQQAAITIRTIEPLGSTTTRAPQRIPAPSLQTLIPALCTKTQQAPLSLDVRTD
RTSSVLGTPEASPTRLEQQVGPLEMSPKKGRSYRGHNITCSPSPREEKGGRERKRRIHHS
SSPCSTDSESDFHSSSSQSRSCSPPRKRYRPRHSKSSSSSSSCSSRCSSRSSSPSVSRSP
PRRRYSYSSRSGSWSRSRSRSPHRRAWRRGSSPRSPSLRPGYRPESRENSQEVKRLKEKA
IEERRVVYVGRIRGTMTLKELKERFSLYGEIEECTLHFRDHGDNYGFVTYYDTKDAFTAI
ENGGKLRKPDELPFDLCFGGRRQFCKASYADLDSNREYDPSPAKGKFDVLDFDTLLKQAQ
RGLKR
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggtggggagcaggcgaggcgatgttaactgcctgcaacatggattttttc
tctacaaatacactggacgaggcggtgatcctccatggtggcctgtctagtgacagtctg
gggctggagacaggagaaacactggaggccctgtgctgtctggacccctccatactgtcc
atatttgaggacacaaccacaggagagaataaagttggacttgatgaggataacgaggcg
acgctgctcacagctctgactgagatcctggataacgtggacaacgagaacctgtccccc
ttcgacacactgccagactctgatttactgactggccagaaaggccgggaacactctccg
ctgaggagactgctttgcttgtcccactcgtctccagagagtgagacaccctgcaacaca
cgacagttctccactgggaagagtctccccaggacacaggagtctgtccagaggagtgat
ggagaggaggaagaggacgcagaggcttgttctccctccctgagcccagacagacaaccc
tcgtccccagagcaagagctcctgacctggggtggcctgtccctgcctctggagcagcac
atggatggagagagcatgtcagtgagtctaggagagctggtcagacacatgcacccctat
tgcatggcagtgtgcgtggaggatgaaggggaagaacggctgctggcggaggaagggata
ctgctggaagtggtcgaacatggagagcatggcgagactatatttgccatcccagatatg
ggcatcccttatgctcatctctctctctccttgccgggagtagaagactcattcaaagcg
gagcagagggttccagatgaaattggagcggatatgttggagacgccagagtctgagtcg
gcgaatgtcgtagttgacgatgacgcagcaaaggtggctggcccttctgaccctgccgag
accctgagagcaaaagcaagtggtgagaatgttatctacaggagaccaaaggaggagact
gtagaaagatgtctgtctcgaaggaaaaagaaacggaaaaacaaagtgaagcgttcacct
gctgaggtcacccccgaacctgcccaggcagaggggagggtcctgaggagcgcgtcccat
aggggcgccgcccaggtctcctcgccccggaagcccatcaaagagacgaccagaccagag
aaaaaggacaaagagacgttttcttctgccatatctatggccgcccccgaagccccaaaa
cagaagacgagagcaacacatactggcgaaacacaacacatacagcgacagagccatgtg
gaagtcacaaccttaacactatccacacaccccagcgttaaggtcatccccgcctcagac
catgtgttgaaggtcatggcctctgacctgttgccagtgactatgaccccaaagaaactc
caaacaaccacaggctgcgagaagcctcaaagccttctagcttctgcagctaacccaaca
gccccccaggcaatgacaatcaaccctgcagcaccccaggcgcttaccccaagtgaacga
cctgtgtcagtggccccccaggcaataatgcagtccaacagtgcctctctagcggccccc
caggtgatccccaagcccattaaggcctcccaggctattgagcccaagcctaagcccctg
tccctccagcagtaccggctgctgcgacagcagaagaaaccggcccccttagagagacca
gaggaccagagcaccaagtggcccagcctccctgatgcccctacagagttgccccctatc
ccctgcctccccatcccctcttccaaagaccctcgtcgcccccacccctccccagggaaa
actgaggtggaggtgaaagtggcctggcagcccatgggaccaggagcacctcctacacct
gaagctctgcttgtgcctcctgcttacatgctggcctccaaatcatcttccccaagcaag
gcttctagtgcaaatgcatcccctataacccctccccagcaagcgactgttcctattcaa
cagccagctaaagctcgccaatcccccatctccgttgtgccttcatcgagtactgtgagt
gtagtacccccaccaccccagaacccttttgtgaagcgtaatataccccaggccccccat
cctgcactcaaccccctgctccagtcccaactaccctccaagactgtggtccttatcaaa
tctcagagctccagtggagcctctactaaaaccactacagctgccgacaggcccgcccta
attgctactatagcccaaaaacccacccctgtcgctggtgctctacttgagaaaatgttc
aactgcaccaccaacgctgctgctgtttctgttcagaagcctacccctgcggctcctttg
aaggtggctactactctccagaagggagtagttactctgccccggcctaagatgcctgac
ctgcttacagtcactcctgggtctaccccagccaaaccctccactacccagtcctccaaa
cctgcagtgaggtgtactacagcccaggaggcccccaaagccaagagccctactcaggaa
ctgatagaggcattcaccagtgaaattggtattgaagctgctgacttcaacagcctgctg
gagcagtttgaagagactcaagctaaagaggagcagtatgttctggaggtctctggtaga
gcagcagctgtaggaaactctagtgtggagcggccatgtgacaggacagttgtggagagg
gtcggcgcacatgacctggcaagcactgcaggtctgacccctccagctactcctcctcac
cagatgtggaagcccttggtccctgtggcactccttgggaagaaccgagtggctgagact
cctaaaccatcgccctccaaggccatccagatcaacgcgaggcccctgcctgccaacaag
ctccgaagcaagcctcccagcccccctataactcccaccaacacggtggctctcactctg
gctttctcagaccacgactactgcctccctcagaaggagcctgtggctattgctgaagag
ccaggcaagcgctggaatgtcaaacagcaagcagccatcaccatcaggaccatcgagccg
cttggcagcaccactaccagggcaccccagaggatccctgccccctccctccagaccctc
attcctgccctgtgtacgaagacccagcaggctcccctatccctggatgtaaggactgat
aggactagctctgtgctgggtacccctgaagcttctcccaccaggctggagcaacaggtt
ggtcccctggagatgagtcccaagaaagggagatcctaccggggccacaacattacctgc
tcccccagccccagggaagaaaagggaggacgcgagaggaaaaggagaatccaccattcc
tccagcccttgttctactgactcggagtctgactttcactcctcctcctctcagtctaga
tcttgctctccacccaggaagaggtacaggcctcgtcactctaagagcagctccagttcc
tcgtcttgctcctctcgttgctcctctcgttcctcctctccttccgtgtcccgttctcct
cccaggcggcggtattcctactcttcccgatctggatcctggagtaggtcccgttcccgc
tctccccacagacgggcatggcgcagaggcagtagtccacgcagcccctctctcagacca
ggctaccggcctgaatctagagaaaacagccaggaggtgaagagactcaaagaaaaagcg
atcgaggagcgtagggttgtttatgtagggcgaatccgggggacaatgactctgaaagag
ctgaaggaacgcttctctttgtatggagagattgaggagtgcactctacactttagagac
catggggataactatgggtttgtgacgtactatgatacgaaggatgcgttcacagccatc
gagaatggtggcaagctccgaaagcctgacgaactcccctttgacctttgctttggggga
aggagacagttctgcaaggccagctacgctgatctagattctaaccgcgagtatgacccg
tcgcctgcaaagggcaagtttgatgtacttgactttgacactttactgaagcaggcccag
agaggtctgaagaggtaa
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