Oncorhynchus tshawytscha (Chinook salmon): 112252812
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Entry
112252812 CDS
T05605
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252812
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112252812
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
112252812
NCBI-ProteinID:
XP_024280211
UniProt:
A0AAZ3PSA6
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Position
LG01:51065711..51081729
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AA seq
436 aa
AA seq
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MSDKEDGASGGGLNVTLTFRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPER
IVTITGPTEGIFRAFSMIAEKFEEDITAAMTNSTVTSHPPVTLRLVFPGSQCGSLIGKGG
SKIKEIRETTGAQVQVAGDMLPESTERAVTISGTPQAITQCVRHICSVMLESPPKGATIP
YRPKTMPGAGHPLFQQQQQHASQAFTIQGQYAFPHQDLTKLHQLAMQHIPLPSLGQSNPT
FPGMGASVPTSSQELAIPNELIGSIIGRHGSKVNEIRQVSGAHIKIASATDGSPMRQVTI
IGSPTSINVAHYLINASLEMAKYTMHAASSASPVDLNNMSFSQSVPTVSTPTSMAVMAAT
TQVPGTMNMHSPSTLQSISTQHYAVPVSSLLGMKTLPMLAMHPAAASGLPQGLSPYSTKV
PTAGMKKSDRQKFAPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaagatggggcctcagggggggggctgaatgttaccctcacgtttcgg
cttctcatgcatgggaaggaagtgggcagcataattggaaagaaaggggaaaccgtcaaa
aagatgagagaggagagtggcgctcgcatcaacatttcagagggatcttctccagagagg
attgttaccatcacaggaccaacagagggcatcttcagagctttctctatgatcgctgag
aagtttgaggaggacattacagctgcaatgacaaacagcactgtaacaagccatcctcca
gtgacactccgccttgtgttcccaggcagtcaatgtggctccttgataggtaaaggaggc
tccaagatcaaggagatccgagagaccacaggtgctcaggtgcaggtggcaggggacatg
ctgccggaatccactgagagagctgtcactatctcaggcactcctcaggccatcacacag
tgtgtcagacacatctgctctgtcatgctggagtcaccgcccaaaggagcaacaatccca
tatcgccccaagaccatgcctggagctggccatccattatttcaacagcaacaacaacat
gcctcacaagctttcacaattcaaggacagtatgcttttccacatcaagatttgaccaag
cttcaccagttggctatgcagcatatccccctcccttcccttgggcagagcaaccctacc
ttccctggaatgggtgcctctgtccccaccagttctcaggagctggcaatacccaatgaa
cttattggctccataattggcagacacggcagcaaggtcaatgagattcgccaggtgtca
ggagctcacattaagatagccagtgcaacggacggatcgcccatgcgccaagtcacgatc
ataggctctccgaccagcatcaatgtggcacactacctcatcaatgccagcttagagatg
gctaaatacaccatgcatgctgcttcctctgcatcacctgttgacctcaacaacatgagc
ttctctcagtctgttcccactgtctccacaccaacctctatggctgtcatggctgccact
acccaagtccctggcaccatgaacatgcactccccctccaccttacagtctatctccacc
cagcactatgctgtccccgtttccagtctacttggcatgaaaacgctccctatgctggct
atgcacccagcagctgcctcaggccttccacaaggtctatccccttacagcactaaagta
cctactgctggcatgaaaaaatctgaccgccagaaatttgccccatattga
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