Oncorhynchus tshawytscha (Chinook salmon): 112252820
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Entry
112252820 CDS
T05605
Name
(RefSeq) poly(rC)-binding protein 3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252820
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112252820
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
MOEP19
Motif
Other DBs
NCBI-GeneID:
112252820
NCBI-ProteinID:
XP_024280221
UniProt:
A0A8C8JMH4
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Position
LG06:61095413..61106766
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AA seq
438 aa
AA seq
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MSDKEGGASEGGLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPER
IVTITGPTEGIFKAFSMIAEKFEEDITAAMTNSTVTSHPPVTLRLVFPGSQCGSLIGKGG
SKIKEIRETTGAQVQVAGDMLPESTERAVTISGTPQAITQCVRHICSVILESPPKGATIP
YRPKTMPGAGHPVFQQQQQQQHASQAFTIQGQYAFPHQDLTKLHQLAMQHIPLPSLGQSN
PTFPGMDASVATSSQELAIPNDFIGSIIGRQGSKINEIRQVSGAHIKIASATDGSPMRQV
TIIGSPTSISVAHYLINVSLEMAKYTMQAASSASSVDLNNMSFSQSAPTVSTPTSMAVMA
ATTQVPGTINMHSPSTLQSIPTQHYAVPVSSLLGMKTLPMLAMHPAAASGLLQSLSPYTT
KIPTAGMKKPERQKFAPY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaaggtggggcctcagagggggggctgaatgttaccctcacgttacgg
cttctgatgcatgggaaggaagtgggcagcataattggaaagaaaggggaaaccgtcaaa
aagatgagagaggagagtggcgctcgcatcaacatttcggagggatcttctccagagagg
attgttaccatcacaggaccaacagagggcatcttcaaagctttctctatgatcgctgag
aagtttgaggaggacattacagctgcaatgacaaacagcacggtaacaagccatcctcca
gtgacactccgccttgtgttcccagggagtcagtgtggctccttgataggcaaaggaggc
tccaagatcaaggagatcagagagaccacaggtgctcaggtgcaggttgcaggggacatg
ctgccagaatccactgagagagctgtcactatctcaggcacacctcaggccatcacacag
tgtgtcagacacatctgctctgtcattctggaatcaccacccaaaggagcaactatccca
tatcgccccaagaccatgccaggagccggccatccagtatttcaacaacaacaacaacaa
caacatgcttcacaagccttcacaattcaaggacagtatgcgtttccacatcaagatttg
accaagcttcaccagttggctatgcagcatatccccctcccttcccttgggcaaagcaac
cctaccttccctggaatggatgcctctgtcgccacaagttctcaggagctggcgataccc
aacgactttattggcagcataattggcagacaaggcagcaagatcaatgagattcgccag
gtgtcaggagctcacatcaagatagccagtgccacggacggatcgcccatgcgccaagtc
acaatcataggctctcctaccagcatcagtgtggcacattacctcatcaatgtcagctta
gagatggctaaatacaccatgcaggctgcttcctctgcgtcatctgttgacctcaacaat
atgagcttctctcagtctgctcccactgtctccacacccacctctatggctgtcatggcc
gccaccacccaagtccctggcaccattaacatgcactccccctccaccttacagtccatc
cccacccagcactatgccgtccccgtttccagtctgcttggcatgaaaacgctccctatg
ctggctatgcacccagcagctgcctcagggctcctgcaaagtctatccccttacaccact
aagattcctactgctggcatgaaaaaacctgagcgccagaagtttgccccatattga
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