Oncorhynchus tshawytscha (Chinook salmon): 112252822
Help
Entry
112252822 CDS
T05605
Name
(RefSeq) DNA-binding protein Ikaros-like isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112252822
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112252822
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112252822
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112252822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
zf-C2H2_11
zf-C2H2_REST
DUF6487
CPSF100_C
GAGA
DUF4764
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
112252822
NCBI-ProteinID:
XP_024280224
LinkDB
All DBs
Position
LG06:61199785..61222236
Genome browser
AA seq
626 aa
AA seq
DB search
MVYWVSAFICRTQSKCQGLLHRLPEQTRPLDKSKQNASVEHRNIEMLGWKEEVQWRGEGP
RAEFHGAAAALRTSAHGAGGSWKNFILQTQGIAEYLHRMETEEAQEMSQTPGRDSPPPND
VSEDQDEAMPVPEDLSASSNLQHNNRGDKGGMACNIKVEARSDEENGLAFDMMMNGEEEE
EECAEDLRVLDASGAKVNGSHAGGPDSKGPYSSAGGIRLPNGKLKCDICGIVCIGPNVLM
VHKRSHTGERPFQCSQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALSGHLR
THSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNQNEQREDL
SQTGSERVLVLERLANNVAKRKSTMPQKFVGGKRLSDLSFEGNPGELMQPHVIDQAINSA
ISYLGAESLRPLIQTSPTSSEVGVIGSMYPLHKLPPEGQGAGGHGLSAKDSAAENLLLLA
KSKSASSERDGSPNHSGQDSTDTESNNEERAGGGASGLIYLNNHITPVVRNGVLPLAKEE
QQRQYEAMRASIEMASEGFKVLSGEGEQLRAYCCEHCRILFLDHVMYTIHMGCHGFRDPF
ECNLCGHRSQDRYEFSSHMTRGEHCY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtctactgggtgtcagcttttatttgcaggacacaaagcaagtgccaagggctgctg
catcgactccccgagcagactcggcctctggataaaagcaagcaaaatgcttcagtcgag
cacagaaacatagaaatgttaggctggaaagaggaagtacagtggagaggggagggaccg
agggcagagttccatggggctgccgcagcgcttcgaacttctgcacatggagcggggggg
agttggaagaacttcatattgcaaactcaaggaatagcagagtacctgcaccgaatggag
acggaggaggcacaggagatgtctcagacgccaggcagggacagcccccctcccaatgat
gtgtctgaggaccaagacgaggccatgcccgtcccagaggacctgtctgccagctccaat
ttacagcacaacaataggggtgacaaaggaggcatggcctgtaacattaaagttgaggct
cgcagtgacgaggagaatgggctcgcctttgacatgatgatgaatggcgaggaggaggag
gaggagtgtgcggaagacttgcgcgtgctcgatgcctcgggggccaaagtgaacggctcc
catgcaggcggccccgacagcaagggcccctactcctcggccgggggtattcgcctgccc
aacgggaagctcaagtgtgatatctgtgggatagtttgcattggccccaatgtgctgatg
gtgcacaagcgaagccacactggagaacgtccgttccagtgcagccagtgtggtgcttct
ttcacccagaaaggcaatctgctgcgccacatcaagctccactcaggagagaagcccttc
aagtgtcacctgtgcaactacgcctgtcgcaggagagatgccctcagcggtcacctgcgt
acccactctgttggaaagccccacaagtgtgcctactgtgggcggagctacaagcagcgt
agctctctggaggaacacaaggagcggtgccacaactacctccagtgtatggggctgcag
aacagcatctatacagtagtaaaggaagaaagcaaccagaatgagcagagggaagactta
agccagacgggatctgagagagtcttggtgctagaaagactagctaataatgtagccaaa
cgtaagagcactatgccacagaagtttgtaggtgggaagcgtctctccgacctctccttc
gagggcaaccccggggaactgatgcagcctcatgtcatcgaccaggccatcaacagcgcc
atcagctacctgggtgccgagtccctgcgacctctcatccagacctccccaacctcctct
gaagtgggggtcattggctccatgtaccccctccacaagctacctccagagggacaaggg
gcggggggccacggcctgtcagccaaggacagcgcagctgagaatttgctgctgctcgcc
aagtccaaatcagcctccagcgagagggacggctcccccaaccacagtggccaggattcc
actgacacggagagcaacaatgaagagagggcaggtggcggggcatcgggcctcatctac
ctgaacaaccacatcacgcctgtggtgcgtaatggcgtgttgcccctggcaaaggaggaa
cagcagcggcagtacgaggccatgcgggccagcatcgagatggcctcagaggggttcaag
gtgctgagtggagagggggagcagttgagggcatattgctgtgaacactgccgcatcctc
ttcctagaccacgtgatgtacaccatccacatgggctgccacggcttccgagaccccttt
gagtgtaacctctgtggccaccgcagtcaggaccgatacgagttttcctcacacatgacc
cgaggggagcattgctactga
DBGET
integrated database retrieval system
